RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 NAP1L4Q99733 375 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 FTOQ9C0B1 505 aaKnown RBP eCLIP13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 TAF1DQ9H5J8 278 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 RIC8AQ9NPQ8 531 aa13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 PCDHA7Q9UN72 937 aa13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 CTDP1Q9Y5B0 961 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 PCDHA1Q9Y5I3 950 aa13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 GOLGB1Q14789 3259 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 PTPRAP18433 802 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 ATP2B1P20020 1258 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 ZYXQ15942 572 aaKnown RBP13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 ZSCAN23Q3MJ62 389 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 TPRNQ4KMQ1 711 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 FSIP1Q8NA03 581 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 ZNF280CQ8ND82 737 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 RBM46Q8TBY0 533 aaKnown RBP13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 FERMT2Q96AC1 680 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 COA7Q96BR5 231 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 SHISA4Q96DD7 197 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 PGBD1Q96JS3 809 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 NUP88Q99567 741 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 PSTPIP2Q9H939 334 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 PRR12Q9ULL5 1215 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 PCDHA6Q9UN73 950 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 PCDHA8Q9Y5H6 950 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 WDR90Q96KV7 1748 aa13.73□□□□□ -0.21
POLR2J3-211ENST00000506060 LAD1O00515 517 aa13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 CTAGE5O15320 804 aa13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 KINO60870 393 aaKnown RBP13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 VEGFAP15692 232 aaPredicted RBP13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 CMA1P23946 247 aa13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 TOB1P50616 345 aaPredicted RBP13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 BACE1P56817 501 aa13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 FAM160A1Q05DH4 1040 aa13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 PTPAQ15257 358 aa13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 EAPPQ56P03 285 aaPredicted RBP13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 PRAMEF18Q5VWM3 479 aa13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 TYW1BQ6NUM6 668 aa13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 ZNF579Q8NAF0 562 aaKnown RBP13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 PRPF38AQ8NAV1 312 aaKnown RBP13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 NUP62CLQ9H1M0 184 aa13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 FAM13BQ9NYF5 915 aa13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 TMOD4Q9NZQ9 345 aa13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 TMEM63CQ9P1W3 806 aa13.72□□□□□ -0.21
POLR2J3-211ENST00000506060 M0R2N6 131 aa13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 USP2O75604 605 aaPredicted RBP13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 FOSP01100 380 aaPredicted RBP13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 MARCKSP29966 332 aaPredicted RBP13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 ZNF445P59923 1031 aa13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 SPP2Q13103 211 aa13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 ARL6IP4Q66PJ3 421 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 ARMC9Q7Z3E5 817 aa13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 ZKSCAN4Q969J2 545 aaPredicted RBP13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 KIFC2Q96AC6 838 aa13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 CCDC34Q96HJ3 373 aa13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 SLF1Q9BQI6 1058 aa13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 MRPL11Q9Y3B7 192 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 PCDHB6Q9Y5E3 794 aa13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 SRPRBQ9Y5M8 271 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 ZHX2Q9Y6X8 837 aa13.71□□□□□ -0.21
POLR2J3-211ENST00000506060 GOLGA6L3A6NEY3 463 aa13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 ADM5C9JUS6 153 aa13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 PTPREP23469 700 aa13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 AP3B2Q13367 1082 aa13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 MTMR2Q13614 643 aa13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 TTLL12Q14166 644 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 L1TD1Q5T7N2 865 aaKnown RBP13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 NEK8Q86SG6 692 aa13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 ANKRD13AQ8IZ07 590 aa13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 CDCA5Q96FF9 252 aa13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 C12orf42Q96LP6 360 aa13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 PYM1Q9BRP8 204 aaKnown RBP13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 TANGO6Q9C0B7 1094 aa13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 RANBP17Q9H2T7 1088 aaKnown RBP13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 EHMT1Q9H9B1 1298 aa13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 DACT1Q9NYF0 836 aa13.7□□□□□ -0.22
POLR2J3-211ENST00000506060 ABCB11O95342 1321 aa13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 UNCXA6NJT0 531 aa13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 PPP1R11O60927 126 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 ZBED4O75132 1171 aa13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 GCFC2P16383 781 aaKnown RBP13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 LIG1P18858 919 aa13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 MCM7P33993 719 aa13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 ATP2C1P98194 919 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 ZNF174Q15697 407 aa13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 MAP3K11Q16584 847 aa13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 INF2Q27J81 1249 aa13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 KIAA1755Q5JYT7 1200 aa13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 AXDND1Q5T1B0 1012 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 JAKMIP3Q5VZ66 844 aa13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 RASGRP4Q8TDF6 673 aa13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 GLIS2Q9BZE0 524 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 TNMDQ9H2S6 317 aa13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 CLSTN2Q9H4D0 955 aa13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 BIN2Q9UBW5 565 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 HOOK1Q9UJC3 728 aaKnown RBP13.69□□□□□ -0.22
POLR2J3-211ENST00000506060 SSC5DA1L4H1 1573 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms