RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 TCAF2A6NFQ2 919 aa8.55□□□□□ -1.04
CHD1-204ENST00000505982 B8ZZF3 427 aa8.55□□□□□ -1.04
CHD1-204ENST00000505982 CLEC3AO75596 197 aa8.55□□□□□ -1.04
CHD1-204ENST00000505982 TP53P04637 393 aaPredicted RBP8.55□□□□□ -1.04
CHD1-204ENST00000505982 KIR3DL1P43629 444 aa8.55□□□□□ -1.04
CHD1-204ENST00000505982 CIAPIN1Q6FI81 312 aa8.55□□□□□ -1.04
CHD1-204ENST00000505982 RIN3Q8TB24 985 aa8.55□□□□□ -1.04
CHD1-204ENST00000505982 BAHD1Q8TBE0 780 aaPredicted RBP8.55□□□□□ -1.04
CHD1-204ENST00000505982 CYB5D2Q8WUJ1 264 aa8.55□□□□□ -1.04
CHD1-204ENST00000505982 AGRPO00253 132 aa8.54□□□□□ -1.04
CHD1-204ENST00000505982 CST3P01034 146 aaPredicted RBP8.54□□□□□ -1.04
CHD1-204ENST00000505982 MED14OSP0DP75 135 aa8.54□□□□□ -1.04
CHD1-204ENST00000505982 NAT2P11245 290 aa8.54□□□□□ -1.04
CHD1-204ENST00000505982 PMS1P54277 932 aaKnown RBP8.54□□□□□ -1.04
CHD1-204ENST00000505982 PLEKHG4Q58EX7 1191 aa8.54□□□□□ -1.04
CHD1-204ENST00000505982 TAF7LQ5H9L4 462 aa8.54□□□□□ -1.04
CHD1-204ENST00000505982 TMEM192Q8IY95 271 aa8.54□□□□□ -1.04
CHD1-204ENST00000505982 KLHL6Q8WZ60 621 aa8.54□□□□□ -1.04
CHD1-204ENST00000505982 CD320Q9NPF0 282 aa8.54□□□□□ -1.04
CHD1-204ENST00000505982 SUCOQ9UBS9 1254 aaKnown RBP8.54□□□□□ -1.04
CHD1-204ENST00000505982 IQCA1LA6NCM1 817 aa8.53□□□□□ -1.04
CHD1-204ENST00000505982 UBOX5O94941 541 aa8.53□□□□□ -1.04
CHD1-204ENST00000505982 SLC10A6Q3KNW5 377 aa8.53□□□□□ -1.04
CHD1-204ENST00000505982 SV2CQ496J9 727 aa8.53□□□□□ -1.04
CHD1-204ENST00000505982 MYLIPQ8WY64 445 aa8.53□□□□□ -1.04
CHD1-204ENST00000505982 KCNN1Q92952 543 aa8.53□□□□□ -1.04
CHD1-204ENST00000505982 PPP1R14AQ96A00 147 aa8.53□□□□□ -1.04
CHD1-204ENST00000505982 ZNF669Q96BR6 464 aaPredicted RBP8.53□□□□□ -1.04
CHD1-204ENST00000505982 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHD1-204ENST00000505982 EPN3Q9H201 632 aa8.53□□□□□ -1.04
CHD1-204ENST00000505982 TMEM260Q9NX78 707 aa8.53□□□□□ -1.04
CHD1-204ENST00000505982 PTCH2Q9Y6C5 1203 aa8.53□□□□□ -1.04
CHD1-204ENST00000505982 CDK11BP21127 795 aaKnown RBP8.52□□□□□ -1.05
CHD1-204ENST00000505982 GLDCP23378 1020 aa8.52□□□□□ -1.05
CHD1-204ENST00000505982 SQSTM1Q13501 440 aa8.52□□□□□ -1.05
CHD1-204ENST00000505982 TMPRSS7Q7RTY8 843 aa8.52□□□□□ -1.05
CHD1-204ENST00000505982 PPFIBP1Q86W92 1011 aa8.52□□□□□ -1.05
CHD1-204ENST00000505982 CCDC144CPQ8IYA2 1237 aa8.52□□□□□ -1.05
CHD1-204ENST00000505982 LRRC47Q8N1G4 583 aaKnown RBP8.52□□□□□ -1.05
CHD1-204ENST00000505982 ZNF512BQ96KM6 892 aaPredicted RBP8.52□□□□□ -1.05
CHD1-204ENST00000505982 SLC26A8Q96RN1 970 aa8.52□□□□□ -1.05
CHD1-204ENST00000505982 SPATA9Q9BWV2 254 aa8.52□□□□□ -1.05
CHD1-204ENST00000505982 MKRN2Q9H000 416 aaKnown RBP8.52□□□□□ -1.05
CHD1-204ENST00000505982 LRP2BPQ9P2M1 347 aa8.52□□□□□ -1.05
CHD1-204ENST00000505982 TMEM59LQ9UK28 342 aa8.52□□□□□ -1.05
CHD1-204ENST00000505982 DNAJC25-GNG10A0A024R161 153 aa8.51□□□□□ -1.05
CHD1-204ENST00000505982 ETV2O00321 342 aaPredicted RBP8.51□□□□□ -1.05
CHD1-204ENST00000505982 PPP1R12AO14974 1030 aaPredicted RBP8.51□□□□□ -1.05
CHD1-204ENST00000505982 IBSPP21815 317 aaPredicted RBP8.51□□□□□ -1.05
CHD1-204ENST00000505982 TNK2Q07912 1038 aa8.51□□□□□ -1.05
CHD1-204ENST00000505982 HEATR6Q6AI08 1181 aaKnown RBP8.51□□□□□ -1.05
CHD1-204ENST00000505982 C16orf86Q6ZW13 317 aa8.51□□□□□ -1.05
CHD1-204ENST00000505982 SMARCC1Q92922 1105 aaPredicted RBP8.51□□□□□ -1.05
CHD1-204ENST00000505982 KCNK12Q9HB15 430 aa8.51□□□□□ -1.05
CHD1-204ENST00000505982 ANKRD34BA5PLL1 514 aa8.5□□□□□ -1.05
CHD1-204ENST00000505982 C9IYK1 514 aa8.5□□□□□ -1.05
CHD1-204ENST00000505982 INHBBP09529 407 aa8.5□□□□□ -1.05
CHD1-204ENST00000505982 HK2P52789 917 aa8.5□□□□□ -1.05
CHD1-204ENST00000505982 RALGPS1Q5JS13 557 aa8.5□□□□□ -1.05
CHD1-204ENST00000505982 LCE5AQ5TCM9 118 aa8.5□□□□□ -1.05
CHD1-204ENST00000505982 FILIP1Q7Z7B0 1213 aa8.5□□□□□ -1.05
CHD1-204ENST00000505982 ZSWIM2Q8NEG5 633 aa8.5□□□□□ -1.05
CHD1-204ENST00000505982 PIWIL2Q8TC59 973 aaKnown RBP8.5□□□□□ -1.05
CHD1-204ENST00000505982 APBA2Q99767 749 aa8.5□□□□□ -1.05
CHD1-204ENST00000505982 HAUS7Q99871 368 aa8.5□□□□□ -1.05
CHD1-204ENST00000505982 SMG5Q9UPR3 1016 aaKnown RBP8.5□□□□□ -1.05
CHD1-204ENST00000505982 ESR1P03372 595 aa8.49□□□□□ -1.05
CHD1-204ENST00000505982 EPHX1P07099 455 aa8.49□□□□□ -1.05
CHD1-204ENST00000505982 ZNF143P52747 638 aaPredicted RBP8.49□□□□□ -1.05
CHD1-204ENST00000505982 PTPROQ16827 1216 aa8.49□□□□□ -1.05
CHD1-204ENST00000505982 ADAT2Q7Z6V5 191 aaKnown RBP8.49□□□□□ -1.05
CHD1-204ENST00000505982 CDH24Q86UP0 819 aa8.49□□□□□ -1.05
CHD1-204ENST00000505982 FEZ1Q99689 392 aa8.49□□□□□ -1.05
CHD1-204ENST00000505982 KRTAP4-5Q9BYR2 181 aa8.49□□□□□ -1.05
CHD1-204ENST00000505982 SUGT1Q9Y2Z0 365 aa8.49□□□□□ -1.05
CHD1-204ENST00000505982 NUAK1O60285 661 aa8.48□□□□□ -1.05
CHD1-204ENST00000505982 ASMTLO95671 621 aa8.48□□□□□ -1.05
CHD1-204ENST00000505982 HPXP02790 462 aa8.48□□□□□ -1.05
CHD1-204ENST00000505982 FAM153BP0C7A2 387 aa8.48□□□□□ -1.05
CHD1-204ENST00000505982 ERVFC1P60507 584 aa8.48□□□□□ -1.05
CHD1-204ENST00000505982 TCEA2Q15560 299 aa8.48□□□□□ -1.05
CHD1-204ENST00000505982 AXDND1Q5T1B0 1012 aaPredicted RBP8.48□□□□□ -1.05
CHD1-204ENST00000505982 DCAF15Q66K64 600 aa8.48□□□□□ -1.05
CHD1-204ENST00000505982 JMYQ8N9B5 988 aa8.48□□□□□ -1.05
CHD1-204ENST00000505982 ZCRB1Q8TBF4 217 aaKnown RBP8.48□□□□□ -1.05
CHD1-204ENST00000505982 FGD4Q96M96 766 aa8.48□□□□□ -1.05
CHD1-204ENST00000505982 GBP3Q9H0R5 595 aa8.48□□□□□ -1.05
CHD1-204ENST00000505982 PRKAB1Q9Y478 270 aa8.48□□□□□ -1.05
CHD1-204ENST00000505982 hCG_2014768A0A024R1R8 64 aa8.47□□□□□ -1.05
CHD1-204ENST00000505982 DNAJC6O75061 913 aa8.47□□□□□ -1.05
CHD1-204ENST00000505982 CTSWP56202 376 aa8.47□□□□□ -1.05
CHD1-204ENST00000505982 RNF4P78317 190 aa8.47□□□□□ -1.05
CHD1-204ENST00000505982 CREG2Q8IUH2 290 aa8.47□□□□□ -1.05
CHD1-204ENST00000505982 ZBTB38Q8NAP3 1195 aaPredicted RBP8.47□□□□□ -1.05
CHD1-204ENST00000505982 SGSM3Q96HU1 749 aa8.47□□□□□ -1.05
CHD1-204ENST00000505982 IPO9Q96P70 1041 aaKnown RBP8.47□□□□□ -1.05
CHD1-204ENST00000505982 CDC6Q99741 560 aa8.47□□□□□ -1.05
CHD1-204ENST00000505982 SPC25Q9HBM1 224 aa8.47□□□□□ -1.05
CHD1-204ENST00000505982 CEP131Q9UPN4 1083 aa8.47□□□□□ -1.05
CHD1-204ENST00000505982 SRFP11831 508 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms