RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 KLRF2D3W0D1 207 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 ZBTB43O43298 467 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 IFNAR1P17181 557 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 TAL1P17542 331 aaPredicted RBP5.76□□□□□ -1.49
LMNB1-208ENST00000504788 STAT2P52630 851 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 SREBF2Q12772 1141 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 PPP2R5BQ15173 497 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 GADL1Q6ZQY3 521 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 ADGRF4Q8IZF3 695 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 NSUN7Q8NE18 718 aaKnown RBP5.76□□□□□ -1.49
LMNB1-208ENST00000504788 CHMP4CQ96CF2 233 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 TMX3Q96JJ7 454 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 FEZ1Q99689 392 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 SLF1Q9BQI6 1058 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 UBA5Q9GZZ9 404 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 SAGE1Q9NXZ1 904 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 FEM1BQ9UK73 627 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 LIMCH1Q9UPQ0 1083 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 SLC12A7Q9Y666 1083 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 ERICH2A1L162 156 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 CCDC69A6NI79 296 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 GOLGA8BA8MQT2 603 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 EDIL3O43854 480 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 FLOT1O75955 427 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 PARP1P09874 1014 aaKnown RBP5.76□□□□□ -1.49
LMNB1-208ENST00000504788 CALM1P0DP23 149 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 CALM2P0DP24 149 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 CALM3P0DP25 149 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 FAM110CQ1W6H9 321 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 SYDE2Q5VT97 1194 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 CATIPQ7Z7H3 387 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 SPNS2Q8IVW8 549 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 CCDC144CPQ8IYA2 1237 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 NECAB1Q8N987 351 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 CLEC4DQ8WXI8 215 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 PORCNQ9H237 461 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 UPF2Q9HAU5 1272 aaKnown RBP5.76□□□□□ -1.49
LMNB1-208ENST00000504788 GPCPD1Q9NPB8 672 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 HOXC10Q9NYD6 342 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 TMOD4Q9NZQ9 345 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.76□□□□□ -1.49
LMNB1-208ENST00000504788 ASTN1O14525 1302 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 DNAH12Q6ZR08 3092 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 MYH7BA7E2Y1 1941 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 SPDYE4A6NLX3 237 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 PRPF3O43395 683 aaKnown RBP5.75□□□□□ -1.49
LMNB1-208ENST00000504788 TBC1D8O95759 1140 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 ALDH1A1P00352 501 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 GCLCP48506 637 aaPredicted RBP5.75□□□□□ -1.49
LMNB1-208ENST00000504788 OAZ1P54368 228 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 SNAP25P60880 206 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 ERVK-9P63128 1117 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 ERVK-24P63145 666 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 CCT2P78371 535 aaKnown RBP5.75□□□□□ -1.49
LMNB1-208ENST00000504788 GRM1Q13255 1194 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 ANKRD1Q15327 319 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 RTN1Q16799 776 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 QRICH1Q2TAL8 776 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 FAM160B2Q86V87 743 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 NUP133Q8WUM0 1156 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 USP6NLQ92738 828 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 PHKBQ93100 1093 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 FGD4Q96M96 766 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 AGBL1Q96MI9 1066 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 PIGSQ96S52 555 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 MOV10L1Q9BXT6 1211 aaKnown RBP5.75□□□□□ -1.49
LMNB1-208ENST00000504788 RNF26Q9BY78 433 aaPredicted RBP5.75□□□□□ -1.49
LMNB1-208ENST00000504788 TANGO6Q9C0B7 1094 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 SPATC1LQ9H0A9 340 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 TSHZ2Q9NRE2 1034 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 RABGAP1Q9Y3P9 1069 aa5.75□□□□□ -1.49
LMNB1-208ENST00000504788 DNAJC25-GNG10A0A024R161 153 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 hCG_1642624A0A1W2PR95 340 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 GOLGA8AA7E2F4 631 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 M0R2N6 131 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 ZBTB5O15062 677 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 JAK2O60674 1132 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 PPFIA3O75145 1194 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 TRPA1O75762 1119 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 FMNL1O95466 1100 aaPredicted RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 ICAM1P05362 532 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 FDX1P10109 184 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 DDIT3P35638 169 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 METAP2P50579 478 aaKnown RBP eCLIP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 STK3Q13188 491 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 TAF1CQ15572 869 aaPredicted RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 CDC37Q16543 378 aaPredicted RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 RIOX2Q8IUF8 465 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 MB21D1Q8N884 522 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 CHURC1Q8WUH1 139 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 KIFC2Q96AC6 838 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 AIFM3Q96NN9 605 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 PARK7Q99497 189 aaKnown RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 LZTS2Q9BRK4 669 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 ARHGAP39Q9C0H5 1083 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 GJB4Q9NTQ9 266 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 RBM28Q9NW13 759 aaKnown RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 CPA4Q9UI42 421 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 GJD2Q9UKL4 321 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 MTMR7Q9Y216 660 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms