RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PPP1R18Q6NYC8 613 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 HEATR3Q7Z4Q2 680 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 LDHDQ86WU2 507 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 GPT2Q8TD30 523 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 LEO1Q8WVC0 666 aaPredicted RBP11.97□□□□□ -0.49
TPM3-217ENST00000504663 LPAR1Q92633 364 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 RNF25Q96BH1 459 aaPredicted RBP11.97□□□□□ -0.49
TPM3-217ENST00000504663 COA7Q96BR5 231 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 P2RX7Q99572 595 aaKnown RBP11.97□□□□□ -0.49
TPM3-217ENST00000504663 VAT1LQ9HCJ6 419 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 PCDHA4Q9UN74 947 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 ATP6V1DQ9Y5K8 247 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 LCTP09848 1927 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 MYH7BA7E2Y1 1941 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 SPDYE5A6NIY4 337 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 CLK2P49760 499 aaKnown RBP11.96□□□□□ -0.49
TPM3-217ENST00000504663 KRT85P78386 507 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 TRIM29Q14134 588 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 POTEEQ6S8J3 1075 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 REPS2Q8NFH8 660 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 RASGRP4Q8TDF6 673 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 PGBD1Q96JS3 809 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 POLR3EQ9NVU0 708 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 RTEL1Q9NZ71 1219 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 TFIP11Q9UBB9 837 aaKnown RBP11.96□□□□□ -0.49
TPM3-217ENST00000504663 RCOR1Q9UKL0 485 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 PCDHA6Q9UN73 950 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 PCDHA8Q9Y5H6 950 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 CLIC4Q9Y696 253 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 ZHX2Q9Y6X8 837 aa11.96□□□□□ -0.49
TPM3-217ENST00000504663 PRPF40AO75400 957 aaKnown RBP11.95□□□□□ -0.5
TPM3-217ENST00000504663 ITGBL1O95965 494 aaPredicted RBP11.95□□□□□ -0.5
TPM3-217ENST00000504663 STAT2P52630 851 aa11.95□□□□□ -0.5
TPM3-217ENST00000504663 HMGCS2P54868 508 aa11.95□□□□□ -0.5
TPM3-217ENST00000504663 ATL3Q6DD88 541 aa11.95□□□□□ -0.5
TPM3-217ENST00000504663 BLIDQ8IZY5 108 aa11.95□□□□□ -0.5
TPM3-217ENST00000504663 CCDC148Q8NFR7 591 aa11.95□□□□□ -0.5
TPM3-217ENST00000504663 WNK4Q96J92 1243 aa11.95□□□□□ -0.5
TPM3-217ENST00000504663 FEZ1Q99689 392 aa11.95□□□□□ -0.5
TPM3-217ENST00000504663 AS3MTQ9HBK9 375 aa11.95□□□□□ -0.5
TPM3-217ENST00000504663 PICK1Q9NRD5 415 aa11.95□□□□□ -0.5
TPM3-217ENST00000504663 KCNH4Q9UQ05 1017 aa11.95□□□□□ -0.5
TPM3-217ENST00000504663 TRIM75PA6NK02 468 aa11.94□□□□□ -0.5
TPM3-217ENST00000504663 RAD21O60216 631 aa11.94□□□□□ -0.5
TPM3-217ENST00000504663 PPP1R12BO60237 982 aaPredicted RBP11.94□□□□□ -0.5
TPM3-217ENST00000504663 XBP1P17861 261 aa11.94□□□□□ -0.5
TPM3-217ENST00000504663 IREB2P48200 963 aaKnown RBP11.94□□□□□ -0.5
TPM3-217ENST00000504663 USP14P54578 494 aa11.94□□□□□ -0.5
TPM3-217ENST00000504663 NAPAP54920 295 aa11.94□□□□□ -0.5
TPM3-217ENST00000504663 NLRP5P59047 1200 aa11.94□□□□□ -0.5
TPM3-217ENST00000504663 GALNT17Q6IS24 598 aa11.94□□□□□ -0.5
TPM3-217ENST00000504663 FAM160B2Q86V87 743 aa11.94□□□□□ -0.5
TPM3-217ENST00000504663 ANKRD13AQ8IZ07 590 aa11.94□□□□□ -0.5
TPM3-217ENST00000504663 LINC00301Q8NCQ3 95 aa11.94□□□□□ -0.5
TPM3-217ENST00000504663 RPAP3Q9H6T3 665 aaPredicted RBP11.94□□□□□ -0.5
TPM3-217ENST00000504663 ELP3Q9H9T3 547 aa11.94□□□□□ -0.5
TPM3-217ENST00000504663 SEC63Q9UGP8 760 aaKnown RBP11.94□□□□□ -0.5
TPM3-217ENST00000504663 FEM1BQ9UK73 627 aa11.94□□□□□ -0.5
TPM3-217ENST00000504663 MORC2Q9Y6X9 1032 aaPredicted RBP11.94□□□□□ -0.5
TPM3-217ENST00000504663 A0A0G2JLL6 359 aaPredicted RBP11.93□□□□□ -0.5
TPM3-217ENST00000504663 SMCO2A6NFE2 343 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 YEATS4O95619 227 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 CALML3P27482 149 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 PPATQ06203 517 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 PPIL2Q13356 520 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 SAFBQ15424 915 aaKnown RBP eCLIP11.93□□□□□ -0.5
TPM3-217ENST00000504663 TREML2Q5T2D2 321 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 ANO1Q5XXA6 986 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 PRRT2Q7Z6L0 340 aaPredicted RBP11.93□□□□□ -0.5
TPM3-217ENST00000504663 ZNF396Q96N95 335 aaPredicted RBP11.93□□□□□ -0.5
TPM3-217ENST00000504663 SLF1Q9BQI6 1058 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 RIC8AQ9NPQ8 531 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.93□□□□□ -0.5
TPM3-217ENST00000504663 TMEM260Q9NX78 707 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 PPP1R9AQ9ULJ8 1098 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 ADAMTS5Q9UNA0 930 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 CLEC11AQ9Y240 323 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 PCDHB6Q9Y5E3 794 aa11.93□□□□□ -0.5
TPM3-217ENST00000504663 C19orf81C9J6K1 198 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 MEIS2O14770 477 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 IRF6O14896 467 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 TRAK2O60296 914 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 NF2P35240 595 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 GHRHRQ02643 423 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 SLC39A14Q15043 492 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 SF3A1Q15459 793 aaKnown RBP11.92□□□□□ -0.5
TPM3-217ENST00000504663 UBE2SQ16763 222 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 KLHL40Q2TBA0 621 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 AXDND1Q5T1B0 1012 aaPredicted RBP11.92□□□□□ -0.5
TPM3-217ENST00000504663 CST9Q5W186 159 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 PIK3AP1Q6ZUJ8 805 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.92□□□□□ -0.5
TPM3-217ENST00000504663 ERO1BQ86YB8 467 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 CHURC1Q8WUH1 139 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 CRYGNQ8WXF5 182 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 KIFC2Q96AC6 838 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 SCAND2PQ9GZW5 306 aaPredicted RBP11.92□□□□□ -0.5
TPM3-217ENST00000504663 SLC38A10Q9HBR0 1119 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 CSADQ9Y600 493 aa11.92□□□□□ -0.5
TPM3-217ENST00000504663 LRRC37A2A6NM11 1700 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms