RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 SYDE2Q5VT97 1194 aa16.73■□□□□ 0.27
HOXC9-202ENST00000504557 ANKLE1Q8NAG6 615 aa16.73■□□□□ 0.27
HOXC9-202ENST00000504557 PNMA1Q8ND90 353 aa16.73■□□□□ 0.27
HOXC9-202ENST00000504557 TTC14Q96N46 770 aa16.73■□□□□ 0.27
HOXC9-202ENST00000504557 TRERF1Q96PN7 1200 aa16.73■□□□□ 0.27
HOXC9-202ENST00000504557 ZSCAN10Q96SZ4 725 aaPredicted RBP16.73■□□□□ 0.27
HOXC9-202ENST00000504557 TINF2Q9BSI4 451 aa16.73■□□□□ 0.27
HOXC9-202ENST00000504557 CPVLQ9H3G5 476 aa16.73■□□□□ 0.27
HOXC9-202ENST00000504557 ACAD9Q9H845 621 aa16.73■□□□□ 0.27
HOXC9-202ENST00000504557 CNNM2Q9H8M5 875 aa16.73■□□□□ 0.27
HOXC9-202ENST00000504557 FBXO40Q9UH90 709 aa16.73■□□□□ 0.27
HOXC9-202ENST00000504557 ZNF536O15090 1300 aa16.72■□□□□ 0.27
HOXC9-202ENST00000504557 LCTP09848 1927 aa16.72■□□□□ 0.27
HOXC9-202ENST00000504557 CYP21A2P08686 494 aa16.72■□□□□ 0.27
HOXC9-202ENST00000504557 FDX1P10109 184 aa16.72■□□□□ 0.27
HOXC9-202ENST00000504557 MNX1P50219 401 aaPredicted RBP16.72■□□□□ 0.27
HOXC9-202ENST00000504557 TRDNQ13061 729 aa16.72■□□□□ 0.27
HOXC9-202ENST00000504557 MUM1L1Q5H9M0 696 aa16.72■□□□□ 0.27
HOXC9-202ENST00000504557 GJC2Q5T442 439 aaPredicted RBP16.72■□□□□ 0.27
HOXC9-202ENST00000504557 KIAA1211Q6ZU35 1233 aa16.72■□□□□ 0.27
HOXC9-202ENST00000504557 C7orf61Q8IZ16 206 aa16.72■□□□□ 0.27
HOXC9-202ENST00000504557 ENAHQ8N8S7 591 aaPredicted RBP16.72■□□□□ 0.27
HOXC9-202ENST00000504557 CHST13Q8NET6 341 aa16.72■□□□□ 0.27
HOXC9-202ENST00000504557 UBA5Q9GZZ9 404 aa16.72■□□□□ 0.27
HOXC9-202ENST00000504557 TAF6LQ9Y6J9 622 aa16.72■□□□□ 0.27
HOXC9-202ENST00000504557 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
HOXC9-202ENST00000504557 DHX16O60231 1041 aaKnown RBP16.71■□□□□ 0.27
HOXC9-202ENST00000504557 CNTN2Q02246 1040 aa16.71■□□□□ 0.27
HOXC9-202ENST00000504557 ZNF543Q08ER8 600 aa16.71■□□□□ 0.27
HOXC9-202ENST00000504557 CCDC178Q5BJE1 867 aa16.71■□□□□ 0.27
HOXC9-202ENST00000504557 NSMFQ6X4W1 530 aa16.71■□□□□ 0.27
HOXC9-202ENST00000504557 CYB5R4Q7L1T6 521 aa16.71■□□□□ 0.27
HOXC9-202ENST00000504557 CHST3Q7LGC8 479 aa16.71■□□□□ 0.27
HOXC9-202ENST00000504557 RALYLQ86SE5 291 aaKnown RBP16.71■□□□□ 0.27
HOXC9-202ENST00000504557 DGKHQ86XP1 1220 aa16.71■□□□□ 0.27
HOXC9-202ENST00000504557 LENG1Q96BZ8 264 aaPredicted RBP16.71■□□□□ 0.27
HOXC9-202ENST00000504557 ZHX1Q9UKY1 873 aaPredicted RBP16.71■□□□□ 0.27
HOXC9-202ENST00000504557 CNPY2Q9Y2B0 182 aa16.71■□□□□ 0.27
HOXC9-202ENST00000504557 RBM8AQ9Y5S9 174 aaKnown RBP16.71■□□□□ 0.27
HOXC9-202ENST00000504557 BAZ2BQ9UIF8 2168 aaKnown RBP16.71■□□□□ 0.27
HOXC9-202ENST00000504557 POTEB2H3BUK9 544 aa16.7■□□□□ 0.26
HOXC9-202ENST00000504557 SEPT4O43236 478 aa16.7■□□□□ 0.26
HOXC9-202ENST00000504557 MSCO60682 206 aa16.7■□□□□ 0.26
HOXC9-202ENST00000504557 PLA2G6O60733 806 aa16.7■□□□□ 0.26
HOXC9-202ENST00000504557 IFIT1BQ5T764 474 aaKnown RBP16.7■□□□□ 0.26
HOXC9-202ENST00000504557 SENP6Q9GZR1 1112 aaPredicted RBP16.7■□□□□ 0.26
HOXC9-202ENST00000504557 A1CFQ9NQ94 594 aaKnown RBP16.7■□□□□ 0.26
HOXC9-202ENST00000504557 PCDH10Q9P2E7 1040 aa16.7■□□□□ 0.26
HOXC9-202ENST00000504557 DIS3Q9Y2L1 958 aaKnown RBP16.7■□□□□ 0.26
HOXC9-202ENST00000504557 NR2E3Q9Y5X4 410 aa16.7■□□□□ 0.26
HOXC9-202ENST00000504557 PFASO15067 1338 aa16.7■□□□□ 0.26
HOXC9-202ENST00000504557 DNAJC25-GNG10A0A024R161 153 aa16.69■□□□□ 0.26
HOXC9-202ENST00000504557 E7EWF7 191 aa16.69■□□□□ 0.26
HOXC9-202ENST00000504557 IGHA2P01877 340 aa16.69■□□□□ 0.26
HOXC9-202ENST00000504557 CAPN2P17655 700 aa16.69■□□□□ 0.26
HOXC9-202ENST00000504557 ATN1P54259 1190 aaPredicted RBP16.69■□□□□ 0.26
HOXC9-202ENST00000504557 USH1GQ495M9 461 aa16.69■□□□□ 0.26
HOXC9-202ENST00000504557 ESYT1Q9BSJ8 1104 aa16.69■□□□□ 0.26
HOXC9-202ENST00000504557 RANBP17Q9H2T7 1088 aaKnown RBP16.69■□□□□ 0.26
HOXC9-202ENST00000504557 VAT1LQ9HCJ6 419 aa16.69■□□□□ 0.26
HOXC9-202ENST00000504557 ANO2Q9NQ90 1003 aa16.69■□□□□ 0.26
HOXC9-202ENST00000504557 DDX49Q9Y6V7 483 aaKnown RBP16.69■□□□□ 0.26
HOXC9-202ENST00000504557 KBTBD13C9JR72 458 aa16.68■□□□□ 0.26
HOXC9-202ENST00000504557 IFIT3O14879 490 aaKnown RBP16.68■□□□□ 0.26
HOXC9-202ENST00000504557 ICAM1P05362 532 aa16.68■□□□□ 0.26
HOXC9-202ENST00000504557 TKFCQ3LXA3 575 aa16.68■□□□□ 0.26
HOXC9-202ENST00000504557 BTNL9Q6UXG8 535 aa16.68■□□□□ 0.26
HOXC9-202ENST00000504557 STOX1Q6ZVD7 989 aa16.68■□□□□ 0.26
HOXC9-202ENST00000504557 PURBQ96QR8 312 aaKnown RBP16.68■□□□□ 0.26
HOXC9-202ENST00000504557 ZMYND8Q9ULU4 1186 aaPredicted RBP16.68■□□□□ 0.26
HOXC9-202ENST00000504557 ERICH2A1L162 156 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 PTPDC1A2A3K4 754 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 SNAI1O95863 264 aaPredicted RBP16.67■□□□□ 0.26
HOXC9-202ENST00000504557 PGK1P00558 417 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 PARP1P09874 1014 aaKnown RBP16.67■□□□□ 0.26
HOXC9-202ENST00000504557 SNHG28P0DPA3 235 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 RARBP10826 455 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 SYN1P17600 705 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 BMP2KLQ5H9B9 411 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 GPATCH4Q5T3I0 446 aaKnown RBP16.67■□□□□ 0.26
HOXC9-202ENST00000504557 CHRDL2Q6WN34 429 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 ARMCX2Q7L311 632 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 ARRDC4Q8NCT1 418 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 NCOA7Q8NI08 942 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 MAP4K1Q92918 833 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 FERMT2Q96AC1 680 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 FGD4Q96M96 766 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 XPNPEP3Q9NQH7 507 aa16.67■□□□□ 0.26
HOXC9-202ENST00000504557 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.67■□□□□ 0.26
HOXC9-202ENST00000504557 COLQQ9Y215 455 aaPredicted RBP16.67■□□□□ 0.26
HOXC9-202ENST00000504557 NFIBO00712 420 aa16.66■□□□□ 0.26
HOXC9-202ENST00000504557 ZNF865P0CJ78 1059 aaPredicted RBP16.66■□□□□ 0.26
HOXC9-202ENST00000504557 AKR1A1P14550 325 aa16.66■□□□□ 0.26
HOXC9-202ENST00000504557 CALML3P27482 149 aa16.66■□□□□ 0.26
HOXC9-202ENST00000504557 LRRC26Q2I0M4 334 aa16.66■□□□□ 0.26
HOXC9-202ENST00000504557 EEPD1Q7L9B9 569 aa16.66■□□□□ 0.26
HOXC9-202ENST00000504557 CCDC144CPQ8IYA2 1237 aa16.66■□□□□ 0.26
HOXC9-202ENST00000504557 LSG1Q9H089 658 aaKnown RBP16.66■□□□□ 0.26
HOXC9-202ENST00000504557 SENP2Q9HC62 589 aa16.66■□□□□ 0.26
HOXC9-202ENST00000504557 CYP39A1Q9NYL5 469 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms