RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ADCYAP1R1P41586 468 aa14.12□□□□□ -0.15
MED28-203ENST00000503945 A0A0G2JMZ2 1700 aa14.12□□□□□ -0.15
MED28-203ENST00000503945 LAMA2P24043 3122 aaKnown RBP14.11□□□□□ -0.15
MED28-203ENST00000503945 ZNF213O14771 459 aa14.11□□□□□ -0.15
MED28-203ENST00000503945 PCP11498 1178 aaKnown RBP14.11□□□□□ -0.15
MED28-203ENST00000503945 LRRC41Q15345 812 aa14.11□□□□□ -0.15
MED28-203ENST00000503945 TRIM60Q495X7 471 aa14.11□□□□□ -0.15
MED28-203ENST00000503945 C9orf50Q5SZB4 431 aa14.11□□□□□ -0.15
MED28-203ENST00000503945 CWC27Q6UX04 472 aaKnown RBP14.11□□□□□ -0.15
MED28-203ENST00000503945 KCTD1Q719H9 257 aa14.11□□□□□ -0.15
MED28-203ENST00000503945 SH3RF1Q7Z6J0 888 aa14.11□□□□□ -0.15
MED28-203ENST00000503945 BADQ92934 168 aa14.11□□□□□ -0.15
MED28-203ENST00000503945 FERMT2Q96AC1 680 aa14.11□□□□□ -0.15
MED28-203ENST00000503945 TTC14Q96N46 770 aa14.11□□□□□ -0.15
MED28-203ENST00000503945 COL25A1Q9BXS0 654 aaPredicted RBP14.11□□□□□ -0.15
MED28-203ENST00000503945 RNF41Q9H4P4 317 aaPredicted RBP14.11□□□□□ -0.15
MED28-203ENST00000503945 PRDM5Q9NQX1 630 aaPredicted RBP14.11□□□□□ -0.15
MED28-203ENST00000503945 DIAPH3Q9NSV4 1193 aa14.11□□□□□ -0.15
MED28-203ENST00000503945 TCP11L1Q9NUJ3 509 aa14.11□□□□□ -0.15
MED28-203ENST00000503945 MTMR7Q9Y216 660 aa14.11□□□□□ -0.15
MED28-203ENST00000503945 CCDC171Q6TFL3 1326 aa14.11□□□□□ -0.15
MED28-203ENST00000503945 PLIN4Q96Q06 1357 aa14.1□□□□□ -0.15
MED28-203ENST00000503945 CUL9Q8IWT3 2517 aa14.1□□□□□ -0.15
MED28-203ENST00000503945 PLXNA1Q9UIW2 1896 aa14.1□□□□□ -0.15
MED28-203ENST00000503945 MYH7P12883 1935 aa14.1□□□□□ -0.15
MED28-203ENST00000503945 TRIM43BA6NCK2 446 aa14.1□□□□□ -0.15
MED28-203ENST00000503945 TOP1P11387 765 aaKnown RBP14.1□□□□□ -0.15
MED28-203ENST00000503945 HAND2P61296 217 aa14.1□□□□□ -0.15
MED28-203ENST00000503945 SNX17Q15036 470 aa14.1□□□□□ -0.15
MED28-203ENST00000503945 TKFCQ3LXA3 575 aa14.1□□□□□ -0.15
MED28-203ENST00000503945 AKNAD1Q5T1N1 836 aa14.1□□□□□ -0.15
MED28-203ENST00000503945 MAMDC4Q6UXC1 1216 aa14.1□□□□□ -0.15
MED28-203ENST00000503945 ZNF467Q7Z7K2 595 aaPredicted RBP14.1□□□□□ -0.15
MED28-203ENST00000503945 RNF180Q86T96 592 aa14.1□□□□□ -0.15
MED28-203ENST00000503945 ZNF589Q86UQ0 364 aaPredicted RBP14.1□□□□□ -0.15
MED28-203ENST00000503945 TRIM43Q96BQ3 446 aaPredicted RBP14.1□□□□□ -0.15
MED28-203ENST00000503945 XPNPEP3Q9NQH7 507 aa14.1□□□□□ -0.15
MED28-203ENST00000503945 FAM184BQ9ULE4 1060 aa14.1□□□□□ -0.15
MED28-203ENST00000503945 DNAJC25-GNG10A0A024R161 153 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 ZNF865P0CJ78 1059 aaPredicted RBP14.09□□□□□ -0.15
MED28-203ENST00000503945 AKR1A1P14550 325 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 TAL1P17542 331 aaPredicted RBP14.09□□□□□ -0.15
MED28-203ENST00000503945 NOVP48745 357 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 ZNF697Q5TEC3 545 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.09□□□□□ -0.15
MED28-203ENST00000503945 DCAF4Q8WV16 495 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 AGBL1Q96MI9 1066 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 TRERF1Q96PN7 1200 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 TMEM47Q9BQJ4 181 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 SEMA6BQ9H3T3 888 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 ACAD9Q9H845 621 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 PDLIM7Q9NR12 457 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 HOMER2Q9NSB8 354 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 TACC3Q9Y6A5 838 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 SYNGAP1Q96PV0 1343 aa14.09□□□□□ -0.15
MED28-203ENST00000503945 SNAI1O95863 264 aaPredicted RBP14.08□□□□□ -0.16
MED28-203ENST00000503945 ALAS1P13196 640 aa14.08□□□□□ -0.16
MED28-203ENST00000503945 TLE2Q04725 743 aa14.08□□□□□ -0.16
MED28-203ENST00000503945 ACVR2BQ13705 512 aa14.08□□□□□ -0.16
MED28-203ENST00000503945 CCDC96Q2M329 555 aa14.08□□□□□ -0.16
MED28-203ENST00000503945 C1orf53Q5VUE5 145 aa14.08□□□□□ -0.16
MED28-203ENST00000503945 CCDC174Q6PII3 467 aa14.08□□□□□ -0.16
MED28-203ENST00000503945 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.08□□□□□ -0.16
MED28-203ENST00000503945 ESR2Q92731 530 aa14.08□□□□□ -0.16
MED28-203ENST00000503945 CDX2Q99626 313 aaPredicted RBP14.08□□□□□ -0.16
MED28-203ENST00000503945 ABHD16BQ9H3Z7 469 aa14.08□□□□□ -0.16
MED28-203ENST00000503945 CTNNA3Q9UI47 895 aa14.08□□□□□ -0.16
MED28-203ENST00000503945 PRR12Q9ULL5 1215 aa14.08□□□□□ -0.16
MED28-203ENST00000503945 ZMYM6O95789 1325 aa14.08□□□□□ -0.16
MED28-203ENST00000503945 UNC80Q8N2C7 3258 aa14.08□□□□□ -0.16
MED28-203ENST00000503945 PGK1P00558 417 aa14.07□□□□□ -0.16
MED28-203ENST00000503945 ITGB8P26012 769 aa14.07□□□□□ -0.16
MED28-203ENST00000503945 NT5C2P49902 561 aa14.07□□□□□ -0.16
MED28-203ENST00000503945 CCDC178Q5BJE1 867 aa14.07□□□□□ -0.16
MED28-203ENST00000503945 ZHX1Q9UKY1 873 aaPredicted RBP14.07□□□□□ -0.16
MED28-203ENST00000503945 PHF24Q9UPV7 400 aa14.07□□□□□ -0.16
MED28-203ENST00000503945 ASB14A6NK59 587 aa14.06□□□□□ -0.16
MED28-203ENST00000503945 SNAP25P60880 206 aa14.06□□□□□ -0.16
MED28-203ENST00000503945 IMMTQ16891 758 aaKnown RBP14.06□□□□□ -0.16
MED28-203ENST00000503945 TTBK2Q6IQ55 1244 aa14.06□□□□□ -0.16
MED28-203ENST00000503945 BTNL9Q6UXG8 535 aa14.06□□□□□ -0.16
MED28-203ENST00000503945 IQCA1Q86XH1 822 aa14.06□□□□□ -0.16
MED28-203ENST00000503945 DGKHQ86XP1 1220 aa14.06□□□□□ -0.16
MED28-203ENST00000503945 TSEN34Q9BSV6 310 aaKnown RBP14.06□□□□□ -0.16
MED28-203ENST00000503945 SPC25Q9HBM1 224 aa14.06□□□□□ -0.16
MED28-203ENST00000503945 GPCPD1Q9NPB8 672 aa14.06□□□□□ -0.16
MED28-203ENST00000503945 RNF146Q9NTX7 359 aa14.06□□□□□ -0.16
MED28-203ENST00000503945 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.06□□□□□ -0.16
MED28-203ENST00000503945 PNMA2Q9UL42 364 aa14.06□□□□□ -0.16
MED28-203ENST00000503945 CCPG1Q9ULG6 757 aa14.06□□□□□ -0.16
MED28-203ENST00000503945 ZNF536O15090 1300 aa14.06□□□□□ -0.16
MED28-203ENST00000503945 DUSP11O75319 330 aaKnown RBP14.05□□□□□ -0.16
MED28-203ENST00000503945 ICAM1P05362 532 aa14.05□□□□□ -0.16
MED28-203ENST00000503945 SLC16A2P36021 539 aa14.05□□□□□ -0.16
MED28-203ENST00000503945 EPHB4P54760 987 aa14.05□□□□□ -0.16
MED28-203ENST00000503945 CNTN2Q02246 1040 aa14.05□□□□□ -0.16
MED28-203ENST00000503945 CCDC144BQ3MJ40 725 aa14.05□□□□□ -0.16
MED28-203ENST00000503945 ARMCX2Q7L311 632 aa14.05□□□□□ -0.16
MED28-203ENST00000503945 CCDC144CPQ8IYA2 1237 aa14.05□□□□□ -0.16
MED28-203ENST00000503945 NUP133Q8WUM0 1156 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms