RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 FEM1BQ9UK73 627 aa10.73□□□□□ -0.69
PROM1-204ENST00000503884 FAM184BQ9ULE4 1060 aa10.73□□□□□ -0.69
PROM1-204ENST00000503884 PCDHB15Q9Y5E8 787 aa10.73□□□□□ -0.69
PROM1-204ENST00000503884 TMEM265A0A087WTH1 108 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 CTAGE5O15320 804 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 FOXP2O15409 715 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 ZBED4O75132 1171 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 TTLL1O95922 423 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 GJA9P57773 515 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 IRX5P78411 483 aaPredicted RBP10.72□□□□□ -0.69
PROM1-204ENST00000503884 ACVR2BQ13705 512 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 KCNA10Q16322 511 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 ZNF444Q8N0Y2 327 aaPredicted RBP10.72□□□□□ -0.69
PROM1-204ENST00000503884 CPXCR1Q8N123 301 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 CHST13Q8NET6 341 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 EXOC6Q8TAG9 804 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 DDX11Q96FC9 970 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 SEC62Q99442 399 aaKnown RBP10.72□□□□□ -0.69
PROM1-204ENST00000503884 ABHD16BQ9H3Z7 469 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 ZNF287Q9HBT7 754 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 RAVER2Q9HCJ3 691 aaKnown RBP10.72□□□□□ -0.69
PROM1-204ENST00000503884 STARD7Q9NQZ5 370 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.72□□□□□ -0.69
PROM1-204ENST00000503884 FBXO40Q9UH90 709 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 TBX21Q9UL17 535 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 ZNF536O15090 1300 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 ELP1O95163 1332 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 TTC41PQ6P2S7 1318 aa10.72□□□□□ -0.69
PROM1-204ENST00000503884 PLA2G6O60733 806 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 PQBP1O60828 265 aaKnown RBP10.71□□□□□ -0.69
PROM1-204ENST00000503884 FDX1P10109 184 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 RAG1P15918 1043 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 NOVP48745 357 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 TDO2P48775 406 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 CCDC144BQ3MJ40 725 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 ZMYM1Q5SVZ6 1142 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 SLFN13Q68D06 897 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 LRRC47Q8N1G4 583 aaKnown RBP10.71□□□□□ -0.69
PROM1-204ENST00000503884 FAM133AQ8N9E0 248 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 NUP133Q8WUM0 1156 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 KIFC2Q96AC6 838 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 GPATCH3Q96I76 525 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 SALL3Q9BXA9 1300 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 TMEM39AQ9NV64 488 aa10.71□□□□□ -0.69
PROM1-204ENST00000503884 ZHX1Q9UKY1 873 aaPredicted RBP10.71□□□□□ -0.69
PROM1-204ENST00000503884 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.71□□□□□ -0.69
PROM1-204ENST00000503884 MYO9BQ13459 2157 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 CHD7Q9P2D1 2997 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 ASTN1O14525 1302 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 TIMP1P01033 207 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 ASGR1P07306 291 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 BMP3P12645 472 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 TFAP4Q01664 338 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 FPGSQ05932 587 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 PPARAQ07869 468 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 RASIP1Q5U651 963 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 C16orf59Q7L2K0 433 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 ARMCX2Q7L311 632 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 ANKRD35Q8N283 1001 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 PCSK9Q8NBP7 692 aaKnown RBP10.7□□□□□ -0.7
PROM1-204ENST00000503884 OTUD7AQ8TE49 926 aaPredicted RBP10.7□□□□□ -0.7
PROM1-204ENST00000503884 GMCL1Q96IK5 515 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 RNPC3Q96LT9 517 aaKnown RBP10.7□□□□□ -0.7
PROM1-204ENST00000503884 GBF1Q92538 1859 aa10.7□□□□□ -0.7
PROM1-204ENST00000503884 MROH7Q68CQ1 1323 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 SOWAHBA6NEL2 793 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 DCDC2CA8MYV0 355 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 TMEM232C9JQI7 657 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 ARVCFO00192 962 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 APPP05067 770 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 C6orf222P0C671 652 aaPredicted RBP10.69□□□□□ -0.7
PROM1-204ENST00000503884 TSPY3P0CV98 308 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 TSPY8P0CW00 308 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 STAT2P52630 851 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 CNTN2Q02246 1040 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 PDE4BQ07343 736 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 HDAC1Q13547 482 aaPredicted RBP10.69□□□□□ -0.7
PROM1-204ENST00000503884 LRRFIP1Q32MZ4 808 aaKnown RBP10.69□□□□□ -0.7
PROM1-204ENST00000503884 MFSD5Q6N075 450 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 CCDC144CPQ8IYA2 1237 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 PIP4P2Q8N4L2 257 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 SLC43A3Q8NBI5 491 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 MAFAQ8NHW3 353 aaPredicted RBP10.69□□□□□ -0.7
PROM1-204ENST00000503884 STAG1Q8WVM7 1258 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 MYLIPQ8WY64 445 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 GLT1D1Q96MS3 346 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.69□□□□□ -0.7
PROM1-204ENST00000503884 NACAP1Q9BZK3 213 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 ACAD9Q9H845 621 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 A1CFQ9NQ94 594 aaKnown RBP10.69□□□□□ -0.7
PROM1-204ENST00000503884 IL17RBQ9NRM6 502 aa10.69□□□□□ -0.7
PROM1-204ENST00000503884 GNEQ9Y223 722 aaKnown RBP10.69□□□□□ -0.7
PROM1-204ENST00000503884 A0A0U1RQG5 324 aaPredicted RBP10.68□□□□□ -0.7
PROM1-204ENST00000503884 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.68□□□□□ -0.7
PROM1-204ENST00000503884 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.68□□□□□ -0.7
PROM1-204ENST00000503884 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.68□□□□□ -0.7
PROM1-204ENST00000503884 ERC2O15083 957 aa10.68□□□□□ -0.7
PROM1-204ENST00000503884 CD4P01730 458 aa10.68□□□□□ -0.7
PROM1-204ENST00000503884 CENPBP07199 599 aaPredicted RBP10.68□□□□□ -0.7
PROM1-204ENST00000503884 FGRP09769 529 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms