RNA–Protein interactions for RNA: ENST00000503258.5

PDE4D-210, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-210ENST00000503258 CNGA1P29973 690 aa9.27□□□□□ -0.92
PDE4D-210ENST00000503258 MKRN4PQ13434 485 aaPredicted RBP9.27□□□□□ -0.92
PDE4D-210ENST00000503258 RAB3GAP1Q15042 981 aa9.27□□□□□ -0.92
PDE4D-210ENST00000503258 NCAPG2Q86XI2 1143 aa9.27□□□□□ -0.92
PDE4D-210ENST00000503258 CAGE1Q8TC20 777 aa9.27□□□□□ -0.92
PDE4D-210ENST00000503258 SP7Q8TDD2 431 aaPredicted RBP9.27□□□□□ -0.92
PDE4D-210ENST00000503258 VWCEQ96DN2 955 aa9.27□□□□□ -0.92
PDE4D-210ENST00000503258 SAP30BPQ9UHR5 308 aaKnown RBP9.27□□□□□ -0.92
PDE4D-210ENST00000503258 ANAPC4Q9UJX5 808 aa9.27□□□□□ -0.92
PDE4D-210ENST00000503258 KIAA1217Q5T5P2 1943 aa9.27□□□□□ -0.93
PDE4D-210ENST00000503258 EDNRBP24530 442 aa9.27□□□□□ -0.93
PDE4D-210ENST00000503258 TEX2Q8IWB9 1127 aa9.27□□□□□ -0.93
PDE4D-210ENST00000503258 USP38Q8NB14 1042 aa9.27□□□□□ -0.93
PDE4D-210ENST00000503258 STAG1Q8WVM7 1258 aa9.27□□□□□ -0.93
PDE4D-210ENST00000503258 ZNF532Q9HCE3 1301 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 USP17L12C9JPN9 530 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 USP17L21D6R901 530 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 HMMRO75330 724 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 AKR1B1P15121 316 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 MICALL1Q8N3F8 863 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 MPHOSPH6Q99547 160 aaKnown RBP9.26□□□□□ -0.93
PDE4D-210ENST00000503258 LMAN2LQ9H0V9 348 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 ACAD9Q9H845 621 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 MAP3K20Q9NYL2 800 aaKnown RBP9.26□□□□□ -0.93
PDE4D-210ENST00000503258 MTCH2Q9Y6C9 303 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 C19orf67A6NJJ6 358 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 B4DLN1 442 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 EEF2P13639 858 aaKnown RBP9.26□□□□□ -0.93
PDE4D-210ENST00000503258 MRPL12P52815 198 aaKnown RBP9.26□□□□□ -0.93
PDE4D-210ENST00000503258 SHROOM1Q2M3G4 852 aaPredicted RBP9.26□□□□□ -0.93
PDE4D-210ENST00000503258 NEDD1Q8NHV4 660 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 CHURC1Q8WUH1 139 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 DCAF4Q8WV16 495 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 MCM9Q9NXL9 1143 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 KMT2EQ8IZD2 1858 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 SURF6O75683 361 aaKnown RBP9.26□□□□□ -0.93
PDE4D-210ENST00000503258 ASGR1P07306 291 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 BMP8AQ7Z5Y6 402 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 DNERQ8NFT8 737 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 RHPN1Q8TCX5 695 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 AFAP1L1Q8TED9 768 aa9.26□□□□□ -0.93
PDE4D-210ENST00000503258 CPT1AP50416 773 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 ATN1P54259 1190 aaPredicted RBP9.25□□□□□ -0.93
PDE4D-210ENST00000503258 ADGRE1Q14246 886 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 DUSP28Q4G0W2 176 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 TAPT1Q6NXT6 567 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 CTR9Q6PD62 1173 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 ARMCX2Q7L311 632 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 TMEM57Q8N5G2 664 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 PRDM5Q9NQX1 630 aaPredicted RBP9.25□□□□□ -0.93
PDE4D-210ENST00000503258 ASTN1O14525 1302 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 RAD50Q92878 1312 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 FSD2A1L4K1 749 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 RASA1P20936 1047 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 ALX1Q15699 326 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 ZNF365Q70YC5 407 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 LCORLQ8N3X6 602 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 IRF2BPLQ9H1B7 796 aa9.25□□□□□ -0.93
PDE4D-210ENST00000503258 RANBP17Q9H2T7 1088 aaKnown RBP9.25□□□□□ -0.93
PDE4D-210ENST00000503258 ERVK-21P61565 698 aa9.24□□□□□ -0.93
PDE4D-210ENST00000503258 CLASRPQ8N2M8 674 aaKnown RBP9.24□□□□□ -0.93
PDE4D-210ENST00000503258 MTG1Q9BT17 334 aaPredicted RBP9.24□□□□□ -0.93
PDE4D-210ENST00000503258 PAG1Q9NWQ8 432 aa9.24□□□□□ -0.93
PDE4D-210ENST00000503258 IDH1O75874 414 aaKnown RBP9.24□□□□□ -0.93
PDE4D-210ENST00000503258 TTLL1O95922 423 aa9.24□□□□□ -0.93
PDE4D-210ENST00000503258 RPLP2P05387 115 aaKnown RBP9.24□□□□□ -0.93
PDE4D-210ENST00000503258 BFSP2Q13515 415 aa9.24□□□□□ -0.93
PDE4D-210ENST00000503258 TMEM31Q5JXX7 168 aa9.24□□□□□ -0.93
PDE4D-210ENST00000503258 SLC9C2Q5TAH2 1124 aa9.24□□□□□ -0.93
PDE4D-210ENST00000503258 WNT8AQ9H1J5 351 aa9.24□□□□□ -0.93
PDE4D-210ENST00000503258 ADD3Q9UEY8 706 aaKnown RBP9.24□□□□□ -0.93
PDE4D-210ENST00000503258 YBX2Q9Y2T7 364 aaKnown RBP9.24□□□□□ -0.93
PDE4D-210ENST00000503258 SLC4A7Q9Y6M7 1214 aa9.24□□□□□ -0.93
PDE4D-210ENST00000503258 NLRC5Q86WI3 1866 aa9.24□□□□□ -0.93
PDE4D-210ENST00000503258 ATG2AQ2TAZ0 1938 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 ZNF536O15090 1300 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 GRIN2DO15399 1336 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 TNFAIP2Q03169 654 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 ITGA7Q13683 1181 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 IL27Q8NEV9 243 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 STRBPQ96SI9 672 aaKnown RBP9.23□□□□□ -0.93
PDE4D-210ENST00000503258 AP5M1Q9H0R1 490 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 SNRKQ9NRH2 765 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 MTMR4Q9NYA4 1195 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 CTNNA3Q9UI47 895 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 ABHD14A-ACY1A0A1B0GW23 586 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 A6NJR5 290 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 ORC4O43929 436 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 HOXC8P31273 242 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 FSCN1Q16658 493 aaKnown RBP9.23□□□□□ -0.93
PDE4D-210ENST00000503258 CCDC144BQ3MJ40 725 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 NKX2-4Q9H2Z4 354 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 HIPK3Q9H422 1215 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 FAM50BQ9Y247 325 aa9.23□□□□□ -0.93
PDE4D-210ENST00000503258 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.23□□□□□ -0.93
PDE4D-210ENST00000503258 F5H6K3 240 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 GTPBP6O43824 516 aaPredicted RBP9.22□□□□□ -0.93
PDE4D-210ENST00000503258 NDUFB10O96000 172 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 TAL1P17542 331 aaPredicted RBP9.22□□□□□ -0.93
PDE4D-210ENST00000503258 KLRC3Q07444 240 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms