RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-208ENST00000498724 SEC31BQ9NQW1 1179 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 TOMM22Q9NS69 142 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 TAB2Q9NYJ8 693 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 ADD3Q9UEY8 706 aaKnown RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 LIMA1Q9UHB6 759 aaKnown RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 PNMA3Q9UL41 463 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 DENND2AQ9ULE3 1009 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 PCDHB6Q9Y5E3 794 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 CD2APQ9Y5K6 639 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 MYH7P12883 1935 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 GOLGB1Q14789 3259 aaKnown RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 PAPPAQ13219 1627 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 PKD1L3Q7Z443 1732 aa5□□□□□ -1.61
TNC-208ENST00000498724 TIAM2Q8IVF5 1701 aa5□□□□□ -1.61
TNC-208ENST00000498724 PCDH11XQ9BZA7 1347 aa5□□□□□ -1.61
TNC-208ENST00000498724 PCDH11YQ9BZA8 1340 aa5□□□□□ -1.61
TNC-208ENST00000498724 ANKRD18BA2A2Z9 1011 aa5□□□□□ -1.61
TNC-208ENST00000498724 TARSL2A2RTX5 802 aaKnown RBP5□□□□□ -1.61
TNC-208ENST00000498724 LRRIQ3A6PVS8 624 aaPredicted RBP5□□□□□ -1.61
TNC-208ENST00000498724 PATL2C9JE40 543 aaKnown RBP5□□□□□ -1.61
TNC-208ENST00000498724 UBE2Q2LH0YL09 131 aa5□□□□□ -1.61
TNC-208ENST00000498724 RNF40O75150 1001 aa5□□□□□ -1.61
TNC-208ENST00000498724 PHACTR2O75167 634 aa5□□□□□ -1.61
TNC-208ENST00000498724 MBD4O95243 580 aa5□□□□□ -1.61
TNC-208ENST00000498724 A1BGP04217 495 aa5□□□□□ -1.61
TNC-208ENST00000498724 GYPCP04921 128 aa5□□□□□ -1.61
TNC-208ENST00000498724 PCCAP05165 728 aaPredicted RBP5□□□□□ -1.61
TNC-208ENST00000498724 COL9A1P20849 921 aa5□□□□□ -1.61
TNC-208ENST00000498724 GUCY1A2P33402 732 aa5□□□□□ -1.61
TNC-208ENST00000498724 KRT9P35527 623 aa5□□□□□ -1.61
TNC-208ENST00000498724 KRT2P35908 639 aa5□□□□□ -1.61
TNC-208ENST00000498724 ATP6V1AP38606 617 aa5□□□□□ -1.61
TNC-208ENST00000498724 CCT6AP40227 531 aaKnown RBP5□□□□□ -1.61
TNC-208ENST00000498724 MCAMP43121 646 aa5□□□□□ -1.61
TNC-208ENST00000498724 TDO2P48775 406 aa5□□□□□ -1.61
TNC-208ENST00000498724 AARSP49588 968 aaKnown RBP eCLIP5□□□□□ -1.61
TNC-208ENST00000498724 FXR1P51114 621 aaKnown RBP eCLIP5□□□□□ -1.61
TNC-208ENST00000498724 RCAN1P53805 252 aa5□□□□□ -1.61
TNC-208ENST00000498724 EIF5P55010 431 aaKnown RBP5□□□□□ -1.61
TNC-208ENST00000498724 CORO7P57737 925 aa5□□□□□ -1.61
TNC-208ENST00000498724 ERVK-24P63145 666 aa5□□□□□ -1.61
TNC-208ENST00000498724 LSM11P83369 360 aaKnown RBP eCLIP5□□□□□ -1.61
TNC-208ENST00000498724 AMPD2Q01433 879 aa5□□□□□ -1.61
TNC-208ENST00000498724 CTDSPL2Q05D32 466 aa5□□□□□ -1.61
TNC-208ENST00000498724 PDE4DQ08499 809 aa5□□□□□ -1.61
TNC-208ENST00000498724 DPYDQ12882 1025 aa5□□□□□ -1.61
TNC-208ENST00000498724 NR5A1Q13285 461 aa5□□□□□ -1.61
TNC-208ENST00000498724 TCIRG1Q13488 830 aa5□□□□□ -1.61
TNC-208ENST00000498724 STIM1Q13586 685 aa5□□□□□ -1.61
TNC-208ENST00000498724 KRT31Q15323 416 aa5□□□□□ -1.61
TNC-208ENST00000498724 DNAJC21Q5F1R6 531 aaKnown RBP5□□□□□ -1.61
TNC-208ENST00000498724 RRP12Q5JTH9 1297 aaKnown RBP5□□□□□ -1.61
TNC-208ENST00000498724 AKNAD1Q5T1N1 836 aa5□□□□□ -1.61
TNC-208ENST00000498724 RRAGBQ5VZM2 374 aa5□□□□□ -1.61
TNC-208ENST00000498724 WWC2Q6AWC2 1192 aa5□□□□□ -1.61
TNC-208ENST00000498724 NCAPH2Q6IBW4 605 aa5□□□□□ -1.61
TNC-208ENST00000498724 IQCEQ6IPM2 695 aa5□□□□□ -1.61
TNC-208ENST00000498724 FOXR1Q6PIV2 292 aa5□□□□□ -1.61
TNC-208ENST00000498724 KIF6Q6ZMV9 814 aa5□□□□□ -1.61
TNC-208ENST00000498724 MFSD6Q6ZSS7 791 aa5□□□□□ -1.61
TNC-208ENST00000498724 TRAPPC11Q7Z392 1133 aa5□□□□□ -1.61
TNC-208ENST00000498724 SH3RF1Q7Z6J0 888 aa5□□□□□ -1.61
TNC-208ENST00000498724 KIAA1328Q86T90 577 aa5□□□□□ -1.61
TNC-208ENST00000498724 METTL3Q86U44 580 aaKnown RBP5□□□□□ -1.61
TNC-208ENST00000498724 EFCAB13Q8IY85 973 aa5□□□□□ -1.61
TNC-208ENST00000498724 IFNL3Q8IZI9 196 aa5□□□□□ -1.61
TNC-208ENST00000498724 TMTC2Q8N394 836 aa5□□□□□ -1.61
TNC-208ENST00000498724 CRACR2BQ8N4Y2 399 aaPredicted RBP5□□□□□ -1.61
TNC-208ENST00000498724 NOA1Q8NC60 698 aaKnown RBP5□□□□□ -1.61
TNC-208ENST00000498724 NKX2-3Q8TAU0 364 aa5□□□□□ -1.61
TNC-208ENST00000498724 SPATA20Q8TB22 786 aa5□□□□□ -1.61
TNC-208ENST00000498724 NUP133Q8WUM0 1156 aa5□□□□□ -1.61
TNC-208ENST00000498724 TATDN2Q93075 761 aa5□□□□□ -1.61
TNC-208ENST00000498724 RPGRIP1Q96KN7 1286 aa5□□□□□ -1.61
TNC-208ENST00000498724 CCDC85AQ96PX6 553 aaPredicted RBP5□□□□□ -1.61
TNC-208ENST00000498724 GSDMAQ96QA5 445 aa5□□□□□ -1.61
TNC-208ENST00000498724 STRBPQ96SI9 672 aaKnown RBP5□□□□□ -1.61
TNC-208ENST00000498724 PLA2G12BQ9BX93 195 aa5□□□□□ -1.61
TNC-208ENST00000498724 NACAP1Q9BZK3 213 aa5□□□□□ -1.61
TNC-208ENST00000498724 RNF41Q9H4P4 317 aaPredicted RBP5□□□□□ -1.61
TNC-208ENST00000498724 HAUS4Q9H6D7 363 aa5□□□□□ -1.61
TNC-208ENST00000498724 SUGCTQ9HAC7 445 aa5□□□□□ -1.61
TNC-208ENST00000498724 CABP5Q9NP86 173 aa5□□□□□ -1.61
TNC-208ENST00000498724 GPCPD1Q9NPB8 672 aa5□□□□□ -1.61
TNC-208ENST00000498724 CNNM1Q9NRU3 951 aa5□□□□□ -1.61
TNC-208ENST00000498724 ABHD10Q9NUJ1 306 aa5□□□□□ -1.61
TNC-208ENST00000498724 RMND1Q9NWS8 449 aa5□□□□□ -1.61
TNC-208ENST00000498724 RWDD2AQ9UIY3 292 aa5□□□□□ -1.61
TNC-208ENST00000498724 ASAP1Q9ULH1 1129 aa5□□□□□ -1.61
TNC-208ENST00000498724 HPCAL4Q9UM19 191 aa5□□□□□ -1.61
TNC-208ENST00000498724 MYO5AQ9Y4I1 1855 aaKnown RBP4.99□□□□□ -1.61
TNC-208ENST00000498724 A0A087WUV0 522 aaPredicted RBP4.99□□□□□ -1.61
TNC-208ENST00000498724 LOC102724428A0A0B4J2F2 783 aa4.99□□□□□ -1.61
TNC-208ENST00000498724 KCNJ18B7U540 433 aa4.99□□□□□ -1.61
TNC-208ENST00000498724 PSMD14O00487 310 aa4.99□□□□□ -1.61
TNC-208ENST00000498724 NDUFA10O95299 355 aa4.99□□□□□ -1.61
TNC-208ENST00000498724 IPO7O95373 1038 aaKnown RBP4.99□□□□□ -1.61
TNC-208ENST00000498724 CPP00450 1065 aa4.99□□□□□ -1.61
TNC-208ENST00000498724 CSF1RP07333 972 aa4.99□□□□□ -1.61
TNC-208ENST00000498724 GNAT2P19087 354 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms