RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 XRCC5P13010 732 aaKnown RBP6.94□□□□□ -1.3
SPTA1-209ENST00000498708 ZKSCAN1P17029 563 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-209ENST00000498708 HDLBPQ00341 1268 aaKnown RBP6.94□□□□□ -1.3
SPTA1-209ENST00000498708 CCDC27Q2M243 656 aa6.94□□□□□ -1.3
SPTA1-209ENST00000498708 GJC2Q5T442 439 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-209ENST00000498708 BEND3Q5T5X7 828 aa6.94□□□□□ -1.3
SPTA1-209ENST00000498708 FOXR1Q6PIV2 292 aa6.94□□□□□ -1.3
SPTA1-209ENST00000498708 CYP2U1Q7Z449 544 aa6.94□□□□□ -1.3
SPTA1-209ENST00000498708 MICALL1Q8N3F8 863 aa6.94□□□□□ -1.3
SPTA1-209ENST00000498708 ANKS1AQ92625 1134 aa6.94□□□□□ -1.3
SPTA1-209ENST00000498708 USP6NLQ92738 828 aa6.94□□□□□ -1.3
SPTA1-209ENST00000498708 TEKT1Q969V4 418 aa6.94□□□□□ -1.3
SPTA1-209ENST00000498708 FAM84BQ96KN1 310 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-209ENST00000498708 C9orf78Q9NZ63 289 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-209ENST00000498708 TMOD2Q9NZR1 351 aa6.94□□□□□ -1.3
SPTA1-209ENST00000498708 NDUFB9Q9Y6M9 179 aa6.94□□□□□ -1.3
SPTA1-209ENST00000498708 A0A1W2PRU2 124 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 PRR33A8MZF0 331 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 HIBADHP31937 336 aaKnown RBP6.93□□□□□ -1.3
SPTA1-209ENST00000498708 GCLCP48506 637 aaPredicted RBP6.93□□□□□ -1.3
SPTA1-209ENST00000498708 TLE2Q04725 743 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 NFIAQ12857 509 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 SNX17Q15036 470 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 CCDC129Q6ZRS4 1044 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 SCYL3Q8IZE3 742 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 FAM9BQ8IZU0 186 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 LPAR1Q92633 364 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 SUCLG2Q96I99 432 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 UIMC1Q96RL1 719 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 PICK1Q9NRD5 415 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 FLRT1Q9NZU1 646 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 DDX20Q9UHI6 824 aaKnown RBP6.93□□□□□ -1.3
SPTA1-209ENST00000498708 DCHS1Q96JQ0 3298 aa6.93□□□□□ -1.3
SPTA1-209ENST00000498708 PRRC2BQ5JSZ5 2229 aaKnown RBP6.93□□□□□ -1.3
SPTA1-209ENST00000498708 TRIOO75962 3097 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 DOCK1Q14185 1865 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 GRM8O00222 908 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 ERC2O15083 957 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 FRAT2O75474 233 aaPredicted RBP6.92□□□□□ -1.3
SPTA1-209ENST00000498708 SRSF11Q05519 484 aaKnown RBP6.92□□□□□ -1.3
SPTA1-209ENST00000498708 CLN3Q13286 438 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 AAK1Q2M2I8 961 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 LRRC24Q50LG9 513 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 ANO1Q5XXA6 986 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 ZNF385CQ66K41 422 aaPredicted RBP6.92□□□□□ -1.3
SPTA1-209ENST00000498708 TRIM22Q8IYM9 498 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 TMEM151AQ8N4L1 468 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 TRPV1Q8NER1 839 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 KLHDC4Q8TBB5 520 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 FERMT2Q96AC1 680 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.92□□□□□ -1.3
SPTA1-209ENST00000498708 SRCIN1Q9C0H9 1055 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 ASCC2Q9H1I8 757 aaPredicted RBP6.92□□□□□ -1.3
SPTA1-209ENST00000498708 TXNRD2Q9NNW7 524 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 MORF4L1Q9UBU8 362 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 DYRK1BQ9Y463 629 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 IL16Q14005 1332 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 ATRNL1Q5VV63 1379 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 LOC285556D6RIA3 1793 aa6.92□□□□□ -1.3
SPTA1-209ENST00000498708 CACNA1GO43497 2377 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 KIAA0355O15063 1070 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 NBPF7P0C2Y1 421 aaPredicted RBP6.91□□□□□ -1.3
SPTA1-209ENST00000498708 RHOQP17081 205 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 CNGA1P29973 690 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 ADCYAP1R1P41586 468 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 FPGSQ05932 587 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 UBE4AQ14139 1066 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 WDR44Q5JSH3 913 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 METTL24Q5JXM2 366 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 C16orf59Q7L2K0 433 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 VPS37DQ86XT2 251 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 WDR63Q8IWG1 891 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 SOCS4Q8WXH5 440 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 MRIQ9BWK5 157 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 PORCNQ9H237 461 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 NKX2-4Q9H2Z4 354 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 PCDHB11Q9Y5F2 797 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 DOCK2Q92608 1830 aa6.91□□□□□ -1.3
SPTA1-209ENST00000498708 ZNF318Q5VUA4 2279 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 ANP32CO43423 234 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 RAG1P15918 1043 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 RGS2P41220 211 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 FOXK2Q01167 660 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 MAP3K10Q02779 954 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 SPP2Q13103 211 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 RASIP1Q5U651 963 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 CDC42EP5Q6NZY7 148 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 GPR142Q7Z601 462 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 KAZALD1Q96I82 304 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 BCL11AQ9H165 835 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 BICC1Q9H694 974 aaKnown RBP6.9□□□□□ -1.3
SPTA1-209ENST00000498708 PRM3Q9NNZ6 103 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 CUEDC1Q9NWM3 386 aaPredicted RBP6.9□□□□□ -1.3
SPTA1-209ENST00000498708 YBX2Q9Y2T7 364 aaKnown RBP6.9□□□□□ -1.3
SPTA1-209ENST00000498708 TACC3Q9Y6A5 838 aa6.9□□□□□ -1.3
SPTA1-209ENST00000498708 RFXAPO00287 272 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 CTNND1O60716 968 aaKnown RBP6.89□□□□□ -1.31
SPTA1-209ENST00000498708 ALDH1L1O75891 902 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 GDF11O95390 407 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 CLTBP09497 229 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms