RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 BUB1O43683 1085 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 SPATA31D3P0C874 917 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 MYZAPP0CAP1 466 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 FAM200BP0CF97 657 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 DHX9Q08211 1270 aaKnown RBP12.87□□□□□ -0.35
PBX1-211ENST00000498497 NR1I3Q14994 352 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 SPATA31D4Q6ZUB0 917 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 RBM12BQ8IXT5 1001 aaKnown RBP12.87□□□□□ -0.35
PBX1-211ENST00000498497 LMNTD2Q8IXW0 634 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 CCDC197Q8NCU1 140 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 CCT6BQ92526 530 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 WDR35Q9P2L0 1181 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 PNMA3Q9UL41 463 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 PACSIN2Q9UNF0 486 aaPredicted RBP12.87□□□□□ -0.35
PBX1-211ENST00000498497 TTC37Q6PGP7 1564 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 MOCS3O95396 460 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 UBTFL6P0CB48 400 aaPredicted RBP12.86□□□□□ -0.35
PBX1-211ENST00000498497 DESP17661 470 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 CTNNA1P35221 906 aaKnown RBP12.86□□□□□ -0.35
PBX1-211ENST00000498497 ADCY1Q08828 1119 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
PBX1-211ENST00000498497 STOX1Q6ZVD7 989 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 USP49Q70CQ1 688 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 DDX46Q7L014 1031 aaKnown RBP12.86□□□□□ -0.35
PBX1-211ENST00000498497 ECT2Q9H8V3 914 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 CCT8L1PA6NM43 557 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 UBXN1Q04323 297 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 ITGB3BPQ13352 177 aaPredicted RBP12.86□□□□□ -0.35
PBX1-211ENST00000498497 NAA16Q6N069 864 aaPredicted RBP12.86□□□□□ -0.35
PBX1-211ENST00000498497 CYP26C1Q6V0L0 522 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 CNGA4Q8IV77 575 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 KRT12Q99456 494 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 CTNND2Q9UQB3 1225 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 SBNO2Q9Y2G9 1366 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 A6NHS1 94 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 GNAQP50148 359 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 RASSF7Q02833 373 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 LRRC14Q15048 493 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 KRT71Q3SY84 523 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 ZC2HC1CQ53FD0 456 aaPredicted RBP12.86□□□□□ -0.35
PBX1-211ENST00000498497 TRIM50Q86XT4 487 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
PBX1-211ENST00000498497 DYDC2Q96IM9 177 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 DNAJC1Q96KC8 554 aaKnown RBP12.86□□□□□ -0.35
PBX1-211ENST00000498497 HELLSQ9NRZ9 838 aa12.86□□□□□ -0.35
PBX1-211ENST00000498497 DISP1Q96F81 1524 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 HIP1RO75146 1068 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 ZNF24P17028 368 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 MUM1Q2TAK8 710 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 GPATCH3Q96I76 525 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 IQCGQ9H095 443 aaKnown RBP12.85□□□□□ -0.35
PBX1-211ENST00000498497 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.85□□□□□ -0.35
PBX1-211ENST00000498497 INTUQ9ULD6 942 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 SUGT1Q9Y2Z0 365 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 CARMIL3Q8ND23 1372 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 MYOM2P54296 1465 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 ZMYM6O95789 1325 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 A0A1W2PQ27 194 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 A0A1W2PQ64 194 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 A0A1W2PQD8 194 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 FDPSP14324 419 aaKnown RBP12.85□□□□□ -0.35
PBX1-211ENST00000498497 CMA1P23946 247 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 ATP11AP98196 1134 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 FAM69CQ0P6D2 419 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 POSTNQ15063 836 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 DDB1Q16531 1140 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 BICDL1Q6ZP65 573 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 TMC4Q7Z404 712 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 NANOGNBQ7Z5D8 188 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 ZC3H18Q86VM9 953 aaKnown RBP12.85□□□□□ -0.35
PBX1-211ENST00000498497 RNF168Q8IYW5 571 aaPredicted RBP12.85□□□□□ -0.35
PBX1-211ENST00000498497 ARHGAP18Q8N392 663 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 PHKBQ93100 1093 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 NDST4Q9H3R1 872 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 CAPN6Q9Y6Q1 641 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 LRRC7Q96NW7 1537 aa12.85□□□□□ -0.35
PBX1-211ENST00000498497 MAGEB3O15480 346 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 LUC7L3O95232 432 aaKnown RBP12.84□□□□□ -0.35
PBX1-211ENST00000498497 PDIA5Q14554 519 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
PBX1-211ENST00000498497 TMTC1Q8IUR5 882 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 ANKS4BQ8N8V4 417 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 RETREG2Q8NC44 543 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 OPTNQ96CV9 577 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 FAM114A2Q9NRY5 505 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 LRWD1Q9UFC0 647 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 TDRKHQ9Y2W6 561 aaKnown RBP12.84□□□□□ -0.35
PBX1-211ENST00000498497 GOLGA8BA8MQT2 603 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 TRAPPC3O43617 180 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 SP100P23497 879 aaPredicted RBP12.84□□□□□ -0.35
PBX1-211ENST00000498497 INHBCP55103 352 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 TUBB4BP68371 445 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 LACTBP83111 547 aaPredicted RBP12.84□□□□□ -0.35
PBX1-211ENST00000498497 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 HAUS3Q68CZ6 603 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 MAGEC3Q8TD91 643 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 EVI5LQ96CN4 794 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 BLZF1Q9H2G9 400 aa12.84□□□□□ -0.35
PBX1-211ENST00000498497 SYNRGQ9UMZ2 1314 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms