RNA–Protein interactions for RNA: ENST00000498447.5

SMIM19-206, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-206ENST00000498447 CST5P28325 142 aaPredicted RBP20.88■□□□□ 0.93
SMIM19-206ENST00000498447 PPARAQ07869 468 aa20.88■□□□□ 0.93
SMIM19-206ENST00000498447 FAAP100Q0VG06 881 aa20.88■□□□□ 0.93
SMIM19-206ENST00000498447 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMIM19-206ENST00000498447 OTUD7AQ8TE49 926 aaPredicted RBP20.88■□□□□ 0.93
SMIM19-206ENST00000498447 RNPC3Q96LT9 517 aaKnown RBP20.88■□□□□ 0.93
SMIM19-206ENST00000498447 TOX2Q96NM4 488 aa20.88■□□□□ 0.93
SMIM19-206ENST00000498447 CDX2Q99626 313 aaPredicted RBP20.88■□□□□ 0.93
SMIM19-206ENST00000498447 NAPBQ9H115 298 aa20.88■□□□□ 0.93
SMIM19-206ENST00000498447 ABHD16BQ9H3Z7 469 aa20.88■□□□□ 0.93
SMIM19-206ENST00000498447 DCDC2CA8MYV0 355 aa20.87■□□□□ 0.93
SMIM19-206ENST00000498447 TMEM232C9JQI7 657 aa20.87■□□□□ 0.93
SMIM19-206ENST00000498447 SLC3A2P08195 630 aaKnown RBP20.87■□□□□ 0.93
SMIM19-206ENST00000498447 FDX1P10109 184 aa20.87■□□□□ 0.93
SMIM19-206ENST00000498447 STAT2P52630 851 aa20.87■□□□□ 0.93
SMIM19-206ENST00000498447 IRX5P78411 483 aaPredicted RBP20.87■□□□□ 0.93
SMIM19-206ENST00000498447 TFAP4Q01664 338 aa20.87■□□□□ 0.93
SMIM19-206ENST00000498447 FPGSQ05932 587 aa20.87■□□□□ 0.93
SMIM19-206ENST00000498447 CCDC144BQ3MJ40 725 aa20.87■□□□□ 0.93
SMIM19-206ENST00000498447 ZMYM1Q5SVZ6 1142 aa20.87■□□□□ 0.93
SMIM19-206ENST00000498447 TTYH1Q9H313 450 aaPredicted RBP20.87■□□□□ 0.93
SMIM19-206ENST00000498447 HOMER2Q9NSB8 354 aa20.87■□□□□ 0.93
SMIM19-206ENST00000498447 ISY1Q9ULR0 285 aaKnown RBP20.87■□□□□ 0.93
SMIM19-206ENST00000498447 PCDHB15Q9Y5E8 787 aa20.87■□□□□ 0.93
SMIM19-206ENST00000498447 VCANP13611 3396 aa20.87■□□□□ 0.93
SMIM19-206ENST00000498447 C6orf222P0C671 652 aaPredicted RBP20.86■□□□□ 0.93
SMIM19-206ENST00000498447 ARMCX2Q7L311 632 aa20.86■□□□□ 0.93
SMIM19-206ENST00000498447 GLT1D1Q96MS3 346 aa20.86■□□□□ 0.93
SMIM19-206ENST00000498447 SPC25Q9HBM1 224 aa20.86■□□□□ 0.93
SMIM19-206ENST00000498447 ELP1O95163 1332 aa20.85■□□□□ 0.93
SMIM19-206ENST00000498447 GJA9P57773 515 aa20.85■□□□□ 0.93
SMIM19-206ENST00000498447 FAM160B2Q86V87 743 aa20.85■□□□□ 0.93
SMIM19-206ENST00000498447 CCDC144CPQ8IYA2 1237 aa20.85■□□□□ 0.93
SMIM19-206ENST00000498447 PCSK9Q8NBP7 692 aaKnown RBP20.85■□□□□ 0.93
SMIM19-206ENST00000498447 GMCL1Q96IK5 515 aa20.85■□□□□ 0.93
SMIM19-206ENST00000498447 KATNBL1Q9H079 304 aa20.85■□□□□ 0.93
SMIM19-206ENST00000498447 UPF3AQ9H1J1 476 aaKnown RBP20.85■□□□□ 0.93
SMIM19-206ENST00000498447 ACAD9Q9H845 621 aa20.85■□□□□ 0.93
SMIM19-206ENST00000498447 ASGR1P07306 291 aa20.84■□□□□ 0.93
SMIM19-206ENST00000498447 SLC1A4P43007 532 aa20.84■□□□□ 0.93
SMIM19-206ENST00000498447 CNTN2Q02246 1040 aa20.84■□□□□ 0.93
SMIM19-206ENST00000498447 IKQ13123 557 aaPredicted RBP20.84■□□□□ 0.93
SMIM19-206ENST00000498447 FAM133AQ8N9E0 248 aa20.84■□□□□ 0.93
SMIM19-206ENST00000498447 CHURC1Q8WUH1 139 aa20.84■□□□□ 0.93
SMIM19-206ENST00000498447 RNF146Q9NTX7 359 aa20.84■□□□□ 0.93
SMIM19-206ENST00000498447 TBX21Q9UL17 535 aa20.84■□□□□ 0.93
SMIM19-206ENST00000498447 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.84■□□□□ 0.93
SMIM19-206ENST00000498447 PRUNE2Q8WUY3 3088 aa20.84■□□□□ 0.93
SMIM19-206ENST00000498447 ZNF536O15090 1300 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 MROH7Q68CQ1 1323 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 FOXP2O15409 715 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 TIMP1P01033 207 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 MX1P20591 662 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 MCCP23508 829 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 CDK7P50613 346 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 PPP4R3BQ5MIZ7 849 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 CCDC129Q6ZRS4 1044 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 STAG1Q8WVM7 1258 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 MYLIPQ8WY64 445 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 CHMP4CQ96CF2 233 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 AGBL1Q96MI9 1066 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 COL25A1Q9BXS0 654 aaPredicted RBP20.83■□□□□ 0.93
SMIM19-206ENST00000498447 A1CFQ9NQ94 594 aaKnown RBP20.83■□□□□ 0.93
SMIM19-206ENST00000498447 STX8Q9UNK0 236 aa20.83■□□□□ 0.93
SMIM19-206ENST00000498447 TMEM265A0A087WTH1 108 aa20.82■□□□□ 0.92
SMIM19-206ENST00000498447 TSPY2A6NKD2 308 aa20.82■□□□□ 0.92
SMIM19-206ENST00000498447 GNASQ5JWF2 1037 aa20.82■□□□□ 0.92
SMIM19-206ENST00000498447 MAFAQ8NHW3 353 aaPredicted RBP20.82■□□□□ 0.92
SMIM19-206ENST00000498447 VTI1AQ96AJ9 217 aa20.82■□□□□ 0.92
SMIM19-206ENST00000498447 SALL3Q9BXA9 1300 aa20.81■□□□□ 0.92
SMIM19-206ENST00000498447 A0A0U1RQG5 324 aaPredicted RBP20.81■□□□□ 0.92
SMIM19-206ENST00000498447 SOWAHBA6NEL2 793 aa20.81■□□□□ 0.92
SMIM19-206ENST00000498447 CTAGE5O15320 804 aa20.81■□□□□ 0.92
SMIM19-206ENST00000498447 PLA2G6O60733 806 aa20.81■□□□□ 0.92
SMIM19-206ENST00000498447 CTDSPL2Q05D32 466 aa20.81■□□□□ 0.92
SMIM19-206ENST00000498447 TKFCQ3LXA3 575 aa20.81■□□□□ 0.92
SMIM19-206ENST00000498447 KCTD1Q719H9 257 aa20.81■□□□□ 0.92
SMIM19-206ENST00000498447 INCENPQ9NQS7 918 aa20.81■□□□□ 0.92
SMIM19-206ENST00000498447 IL17RBQ9NRM6 502 aa20.81■□□□□ 0.92
SMIM19-206ENST00000498447 LRRC37A2A6NM11 1700 aa20.81■□□□□ 0.92
SMIM19-206ENST00000498447 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.8■□□□□ 0.92
SMIM19-206ENST00000498447 ARVCFO00192 962 aa20.8■□□□□ 0.92
SMIM19-206ENST00000498447 NMT2O60551 498 aa20.8■□□□□ 0.92
SMIM19-206ENST00000498447 ALAS1P13196 640 aa20.8■□□□□ 0.92
SMIM19-206ENST00000498447 NKX3-2P78367 333 aa20.8■□□□□ 0.92
SMIM19-206ENST00000498447 MFSD5Q6N075 450 aa20.8■□□□□ 0.92
SMIM19-206ENST00000498447 CCDC174Q6PII3 467 aa20.8■□□□□ 0.92
SMIM19-206ENST00000498447 RASGRP2Q7LDG7 609 aa20.8■□□□□ 0.92
SMIM19-206ENST00000498447 TRERF1Q96PN7 1200 aa20.8■□□□□ 0.92
SMIM19-206ENST00000498447 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMIM19-206ENST00000498447 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.79■□□□□ 0.92
SMIM19-206ENST00000498447 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.79■□□□□ 0.92
SMIM19-206ENST00000498447 ASB14A6NK59 587 aa20.79■□□□□ 0.92
SMIM19-206ENST00000498447 FOSL2P15408 326 aa20.79■□□□□ 0.92
SMIM19-206ENST00000498447 SNAP25P60880 206 aa20.79■□□□□ 0.92
SMIM19-206ENST00000498447 BEX3Q00994 111 aa20.79■□□□□ 0.92
SMIM19-206ENST00000498447 TNFAIP2Q03169 654 aa20.79■□□□□ 0.92
SMIM19-206ENST00000498447 RCSD1Q6JBY9 416 aa20.79■□□□□ 0.92
SMIM19-206ENST00000498447 FAM126BQ8IXS8 530 aa20.79■□□□□ 0.92
SMIM19-206ENST00000498447 PRR12Q9ULL5 1215 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms