RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 CNTN2Q02246 1040 aa19.2■□□□□ 0.66
MUC1-220ENST00000498431 TSHZ3Q63HK5 1081 aa19.2■□□□□ 0.66
MUC1-220ENST00000498431 GIMAP6Q6P9H5 292 aa19.2■□□□□ 0.66
MUC1-220ENST00000498431 LRRC47Q8N1G4 583 aaKnown RBP19.2■□□□□ 0.66
MUC1-220ENST00000498431 ANKRD35Q8N283 1001 aa19.2■□□□□ 0.66
MUC1-220ENST00000498431 VTI1AQ96AJ9 217 aa19.2■□□□□ 0.66
MUC1-220ENST00000498431 PPP1R12CQ9BZL4 782 aa19.2■□□□□ 0.66
MUC1-220ENST00000498431 KATNBL1Q9H079 304 aa19.2■□□□□ 0.66
MUC1-220ENST00000498431 ABHD16BQ9H3Z7 469 aa19.2■□□□□ 0.66
MUC1-220ENST00000498431 ARVCFO00192 962 aa19.19■□□□□ 0.66
MUC1-220ENST00000498431 PPIGQ13427 754 aaKnown RBP eCLIP19.19■□□□□ 0.66
MUC1-220ENST00000498431 GNASQ5JWF2 1037 aa19.19■□□□□ 0.66
MUC1-220ENST00000498431 RASIP1Q5U651 963 aa19.19■□□□□ 0.66
MUC1-220ENST00000498431 FAM126BQ8IXS8 530 aa19.19■□□□□ 0.66
MUC1-220ENST00000498431 CCDC144CPQ8IYA2 1237 aa19.19■□□□□ 0.66
MUC1-220ENST00000498431 KBTBD3Q8NAB2 608 aa19.19■□□□□ 0.66
MUC1-220ENST00000498431 PCSK9Q8NBP7 692 aaKnown RBP19.19■□□□□ 0.66
MUC1-220ENST00000498431 MKL1Q969V6 931 aa19.19■□□□□ 0.66
MUC1-220ENST00000498431 PBX4Q9BYU1 374 aa19.19■□□□□ 0.66
MUC1-220ENST00000498431 HOMER2Q9NSB8 354 aa19.19■□□□□ 0.66
MUC1-220ENST00000498431 ECHDC1Q9NTX5 307 aa19.19■□□□□ 0.66
MUC1-220ENST00000498431 MTMR4Q9NYA4 1195 aa19.19■□□□□ 0.66
MUC1-220ENST00000498431 CTDP1Q9Y5B0 961 aaPredicted RBP19.19■□□□□ 0.66
MUC1-220ENST00000498431 MROH7Q68CQ1 1323 aa19.19■□□□□ 0.66
MUC1-220ENST00000498431 A0A0U1RQG5 324 aaPredicted RBP19.18■□□□□ 0.66
MUC1-220ENST00000498431 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.18■□□□□ 0.66
MUC1-220ENST00000498431 M0R2C6 588 aa19.18■□□□□ 0.66
MUC1-220ENST00000498431 GPAA1O43292 621 aa19.18■□□□□ 0.66
MUC1-220ENST00000498431 PTGS1P23219 599 aa19.18■□□□□ 0.66
MUC1-220ENST00000498431 BEX3Q00994 111 aa19.18■□□□□ 0.66
MUC1-220ENST00000498431 C20orf194Q5TEA3 1177 aa19.18■□□□□ 0.66
MUC1-220ENST00000498431 APPBP2Q92624 585 aa19.18■□□□□ 0.66
MUC1-220ENST00000498431 FEM1BQ9UK73 627 aa19.18■□□□□ 0.66
MUC1-220ENST00000498431 DDX49Q9Y6V7 483 aaKnown RBP19.18■□□□□ 0.66
MUC1-220ENST00000498431 ASTN1O14525 1302 aa19.18■□□□□ 0.66
MUC1-220ENST00000498431 XIRP2A4UGR9 3374 aa19.17■□□□□ 0.66
MUC1-220ENST00000498431 ZNF365Q70YC5 407 aa19.17■□□□□ 0.66
MUC1-220ENST00000498431 CHST13Q8NET6 341 aa19.17■□□□□ 0.66
MUC1-220ENST00000498431 SYMPKQ92797 1274 aaKnown RBP19.17■□□□□ 0.66
MUC1-220ENST00000498431 SPC25Q9HBM1 224 aa19.17■□□□□ 0.66
MUC1-220ENST00000498431 FBXO40Q9UH90 709 aa19.17■□□□□ 0.66
MUC1-220ENST00000498431 LRRC37A2A6NM11 1700 aa19.17■□□□□ 0.66
MUC1-220ENST00000498431 RNF113AO15541 343 aaKnown RBP19.16■□□□□ 0.66
MUC1-220ENST00000498431 TTLL1O95922 423 aa19.16■□□□□ 0.66
MUC1-220ENST00000498431 CYP2C18P33260 490 aa19.16■□□□□ 0.66
MUC1-220ENST00000498431 TDO2P48775 406 aa19.16■□□□□ 0.66
MUC1-220ENST00000498431 TJAP1Q5JTD0 557 aa19.16■□□□□ 0.66
MUC1-220ENST00000498431 CCDC129Q6ZRS4 1044 aa19.16■□□□□ 0.66
MUC1-220ENST00000498431 ZNF444Q8N0Y2 327 aaPredicted RBP19.16■□□□□ 0.66
MUC1-220ENST00000498431 FAM133AQ8N9E0 248 aa19.16■□□□□ 0.66
MUC1-220ENST00000498431 GMCL1P1Q8NEA9 526 aa19.16■□□□□ 0.66
MUC1-220ENST00000498431 PPM1EQ8WY54 764 aa19.16■□□□□ 0.66
MUC1-220ENST00000498431 CHMP4CQ96CF2 233 aa19.16■□□□□ 0.66
MUC1-220ENST00000498431 PRDM12Q9H4Q4 367 aa19.16■□□□□ 0.66
MUC1-220ENST00000498431 MYO9BQ13459 2157 aa19.16■□□□□ 0.66
MUC1-220ENST00000498431 GBF1Q92538 1859 aa19.16■□□□□ 0.66
MUC1-220ENST00000498431 CD4P01730 458 aa19.15■□□□□ 0.66
MUC1-220ENST00000498431 APPP05067 770 aa19.15■□□□□ 0.66
MUC1-220ENST00000498431 BMP3P12645 472 aa19.15■□□□□ 0.66
MUC1-220ENST00000498431 OAZ1P54368 228 aa19.15■□□□□ 0.66
MUC1-220ENST00000498431 SLFN13Q68D06 897 aa19.15■□□□□ 0.66
MUC1-220ENST00000498431 TMEM199Q8N511 208 aa19.15■□□□□ 0.66
MUC1-220ENST00000498431 AGBL1Q96MI9 1066 aa19.15■□□□□ 0.66
MUC1-220ENST00000498431 CXXC1Q9P0U4 656 aaPredicted RBP19.15■□□□□ 0.66
MUC1-220ENST00000498431 ZNF536O15090 1300 aa19.15■□□□□ 0.66
MUC1-220ENST00000498431 UMODL1Q5DID0 1318 aa19.15■□□□□ 0.66
MUC1-220ENST00000498431 PLIN4Q96Q06 1357 aa19.15■□□□□ 0.66
MUC1-220ENST00000498431 SOWAHBA6NEL2 793 aa19.14■□□□□ 0.65
MUC1-220ENST00000498431 TMEM232C9JQI7 657 aa19.14■□□□□ 0.65
MUC1-220ENST00000498431 NKX3-2P78367 333 aa19.14■□□□□ 0.65
MUC1-220ENST00000498431 TNFAIP2Q03169 654 aa19.14■□□□□ 0.65
MUC1-220ENST00000498431 CXCL17Q6UXB2 119 aa19.14■□□□□ 0.65
MUC1-220ENST00000498431 IFNL3Q8IZI9 196 aa19.14■□□□□ 0.65
MUC1-220ENST00000498431 SLC43A3Q8NBI5 491 aa19.14■□□□□ 0.65
MUC1-220ENST00000498431 NEDD1Q8NHV4 660 aa19.14■□□□□ 0.65
MUC1-220ENST00000498431 SEC62Q99442 399 aaKnown RBP19.14■□□□□ 0.65
MUC1-220ENST00000498431 ACAD9Q9H845 621 aa19.14■□□□□ 0.65
MUC1-220ENST00000498431 A1CFQ9NQ94 594 aaKnown RBP19.14■□□□□ 0.65
MUC1-220ENST00000498431 TRANK1O15050 2925 aa19.13■□□□□ 0.65
MUC1-220ENST00000498431 TLR3O15455 904 aaKnown RBP19.13■□□□□ 0.65
MUC1-220ENST00000498431 ADGRE1Q14246 886 aa19.13■□□□□ 0.65
MUC1-220ENST00000498431 TMEM63BQ5T3F8 832 aa19.13■□□□□ 0.65
MUC1-220ENST00000498431 PSRC1Q6PGN9 363 aaPredicted RBP19.13■□□□□ 0.65
MUC1-220ENST00000498431 CCDC174Q6PII3 467 aa19.13■□□□□ 0.65
MUC1-220ENST00000498431 NOL8Q76FK4 1167 aaKnown RBP19.13■□□□□ 0.65
MUC1-220ENST00000498431 RASGRP2Q7LDG7 609 aa19.13■□□□□ 0.65
MUC1-220ENST00000498431 GAS2L1Q99501 681 aaPredicted RBP19.13■□□□□ 0.65
MUC1-220ENST00000498431 CHMP4BQ9H444 224 aaKnown RBP19.13■□□□□ 0.65
MUC1-220ENST00000498431 IL23AQ9NPF7 189 aa19.13■□□□□ 0.65
MUC1-220ENST00000498431 RNF146Q9NTX7 359 aa19.13■□□□□ 0.65
MUC1-220ENST00000498431 ISY1Q9ULR0 285 aaKnown RBP19.13■□□□□ 0.65
MUC1-220ENST00000498431 SYNPO2Q9UMS6 1093 aa19.13■□□□□ 0.65
MUC1-220ENST00000498431 GNEQ9Y223 722 aaKnown RBP19.13■□□□□ 0.65
MUC1-220ENST00000498431 GRIN2DO15399 1336 aa19.13■□□□□ 0.65
MUC1-220ENST00000498431 LCTP09848 1927 aa19.12■□□□□ 0.65
MUC1-220ENST00000498431 PATL2C9JE40 543 aaKnown RBP19.12■□□□□ 0.65
MUC1-220ENST00000498431 TSPY3P0CV98 308 aa19.12■□□□□ 0.65
MUC1-220ENST00000498431 TSPY8P0CW00 308 aa19.12■□□□□ 0.65
MUC1-220ENST00000498431 GNAT2P19087 354 aa19.12■□□□□ 0.65
MUC1-220ENST00000498431 SNAP25P60880 206 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms