RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 COL17A1Q9UMD9 1497 aaPredicted RBP5.04□□□□□ -1.6
CALD1-224ENST00000498254 CNTNAP4Q9C0A0 1308 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 H0Y8X5 98 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 KCNQ2O43526 872 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 KPNA6O60684 536 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 LEFTY1O75610 366 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 CBX7O95931 251 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 BMP3P12645 472 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 NOS3P29474 1203 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 ANKRD39Q53RE8 183 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 BRDTQ58F21 947 aaPredicted RBP5.03□□□□□ -1.6
CALD1-224ENST00000498254 WWC2Q6AWC2 1192 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 STRA8Q7Z7C7 330 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 ARHGEF39Q8N4T4 335 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 TMEM145Q8NBT3 493 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 KCTD13Q8WZ19 329 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 UTP4Q969X6 686 aaKnown RBP5.03□□□□□ -1.6
CALD1-224ENST00000498254 YIPF2Q9BWQ6 316 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 ASPNQ9BXN1 380 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 KCNF1Q9H3M0 494 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 TRIM39Q9HCM9 518 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 CHPF2Q9P2E5 772 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 MAGEC2Q9UBF1 373 aaPredicted RBP5.03□□□□□ -1.6
CALD1-224ENST00000498254 MCM8Q9UJA3 840 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 FHOD1Q9Y613 1164 aa5.03□□□□□ -1.6
CALD1-224ENST00000498254 STXBP3O00186 592 aa5.02□□□□□ -1.61
CALD1-224ENST00000498254 RASGRP1O95267 797 aa5.02□□□□□ -1.61
CALD1-224ENST00000498254 MAP4P27816 1152 aaKnown RBP5.02□□□□□ -1.61
CALD1-224ENST00000498254 GFRA1P56159 465 aa5.02□□□□□ -1.61
CALD1-224ENST00000498254 ADGRE1Q14246 886 aa5.02□□□□□ -1.61
CALD1-224ENST00000498254 PCBP1Q15365 356 aaKnown RBP eCLIP5.02□□□□□ -1.61
CALD1-224ENST00000498254 NFKBIBQ15653 356 aa5.02□□□□□ -1.61
CALD1-224ENST00000498254 NTRK3Q16288 839 aa5.02□□□□□ -1.61
CALD1-224ENST00000498254 RAVER1Q8IY67 606 aaKnown RBP5.02□□□□□ -1.61
CALD1-224ENST00000498254 TMEM130Q8N3G9 435 aa5.02□□□□□ -1.61
CALD1-224ENST00000498254 RCC1LQ96I51 464 aaKnown RBP5.02□□□□□ -1.61
CALD1-224ENST00000498254 DNAJC25-GNG10A0A024R161 153 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 FAM83GA6ND36 823 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 KATNA1O75449 491 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 PRAMEF1O95521 474 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 EOMESO95936 686 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 CAPNS1P04632 268 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 CD3EP07766 207 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 FAM87AP0C7U9 286 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 GABREP78334 506 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 AMPD2Q01433 879 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 SCRN1Q12765 414 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 MAP7Q14244 749 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 MBTPS1Q14703 1052 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 PKN3Q6P5Z2 889 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 CRTC3Q6UUV7 619 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 KCNT2Q6UVM3 1135 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.01□□□□□ -1.61
CALD1-224ENST00000498254 LHFPL2Q6ZUX7 228 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 TXNRD3Q86VQ6 643 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 FMNL3Q8IVF7 1028 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 AFAP1L2Q8N4X5 818 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 SYTL5Q8TDW5 730 aaPredicted RBP5.01□□□□□ -1.61
CALD1-224ENST00000498254 WFDC12Q8WWY7 111 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 DDX1Q92499 740 aaKnown RBP5.01□□□□□ -1.61
CALD1-224ENST00000498254 SCLYQ96I15 445 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 FAM46AQ96IP4 442 aaKnown RBP5.01□□□□□ -1.61
CALD1-224ENST00000498254 FBXL18Q96ME1 805 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 SMAD5Q99717 465 aaKnown RBP5.01□□□□□ -1.61
CALD1-224ENST00000498254 POLR3GLQ9BT43 218 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 DUSP23Q9BVJ7 150 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 NKX2-4Q9H2Z4 354 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 TYW1Q9NV66 732 aaKnown RBP5.01□□□□□ -1.61
CALD1-224ENST00000498254 MAPRE3Q9UPY8 281 aa5.01□□□□□ -1.61
CALD1-224ENST00000498254 ASXL2Q76L83 1435 aa5□□□□□ -1.61
CALD1-224ENST00000498254 FAM95CA0A1B0GW59 222 aa5□□□□□ -1.61
CALD1-224ENST00000498254 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5□□□□□ -1.61
CALD1-224ENST00000498254 SHISA3A0PJX4 238 aa5□□□□□ -1.61
CALD1-224ENST00000498254 CRTAMO95727 393 aa5□□□□□ -1.61
CALD1-224ENST00000498254 JMJD7P0C870 316 aa5□□□□□ -1.61
CALD1-224ENST00000498254 CYP7A1P22680 504 aa5□□□□□ -1.61
CALD1-224ENST00000498254 HOXC12P31275 282 aa5□□□□□ -1.61
CALD1-224ENST00000498254 GUCY2FP51841 1108 aa5□□□□□ -1.61
CALD1-224ENST00000498254 NRG1Q02297 640 aaPredicted RBP5□□□□□ -1.61
CALD1-224ENST00000498254 NMIQ13287 307 aaPredicted RBP5□□□□□ -1.61
CALD1-224ENST00000498254 SEPT7Q16181 437 aaKnown RBP5□□□□□ -1.61
CALD1-224ENST00000498254 SKOR2Q2VWA4 1001 aaPredicted RBP5□□□□□ -1.61
CALD1-224ENST00000498254 TRIM61Q5EBN2 209 aa5□□□□□ -1.61
CALD1-224ENST00000498254 DDX46Q7L014 1031 aaKnown RBP5□□□□□ -1.61
CALD1-224ENST00000498254 PPM1KQ8N3J5 372 aa5□□□□□ -1.61
CALD1-224ENST00000498254 DTWD2Q8NBA8 298 aa5□□□□□ -1.61
CALD1-224ENST00000498254 EZH1Q92800 747 aaPredicted RBP5□□□□□ -1.61
CALD1-224ENST00000498254 PTPRN2Q92932 1015 aa5□□□□□ -1.61
CALD1-224ENST00000498254 LENG1Q96BZ8 264 aaPredicted RBP5□□□□□ -1.61
CALD1-224ENST00000498254 MEGF10Q96KG7 1140 aa5□□□□□ -1.61
CALD1-224ENST00000498254 Q96M66 194 aa5□□□□□ -1.61
CALD1-224ENST00000498254 MCMBPQ9BTE3 642 aa5□□□□□ -1.61
CALD1-224ENST00000498254 ASCC2Q9H1I8 757 aaPredicted RBP5□□□□□ -1.61
CALD1-224ENST00000498254 GPRC5CQ9NQ84 441 aa5□□□□□ -1.61
CALD1-224ENST00000498254 PRDM5Q9NQX1 630 aaPredicted RBP5□□□□□ -1.61
CALD1-224ENST00000498254 C1GALT1Q9NS00 363 aa5□□□□□ -1.61
CALD1-224ENST00000498254 CHST7Q9NS84 486 aa5□□□□□ -1.61
CALD1-224ENST00000498254 INTS7Q9NVH2 962 aaKnown RBP5□□□□□ -1.61
CALD1-224ENST00000498254 DIS3Q9Y2L1 958 aaKnown RBP5□□□□□ -1.61
CALD1-224ENST00000498254 THRAP3Q9Y2W1 955 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms