RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 TBC1D9BQ66K14 1250 aa7.35□□□□□ -1.23
TMEM39A-212ENST00000497993 HOMER2Q9NSB8 354 aa7.35□□□□□ -1.23
TMEM39A-212ENST00000497993 TMEM63CQ9P1W3 806 aa7.35□□□□□ -1.23
TMEM39A-212ENST00000497993 ZNF652Q9Y2D9 606 aa7.35□□□□□ -1.23
TMEM39A-212ENST00000497993 EFR3BQ9Y2G0 817 aa7.35□□□□□ -1.23
TMEM39A-212ENST00000497993 ZNF646O15015 1829 aaPredicted RBP7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 FAM221BA6H8Z2 402 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 APAF1O14727 1248 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 USP17L7P0C7H9 530 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 YY1P25490 414 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 GNAI1P63096 354 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 TBC1D8BQ0IIM8 1120 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 IFRD2Q12894 506 aaPredicted RBP7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 CRY2Q49AN0 593 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 SPTY2D1Q68D10 685 aaPredicted RBP7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 PRR5LQ6MZQ0 368 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 C16orf86Q6ZW13 317 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 CPLX3Q8WVH0 158 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 SGSM3Q96HU1 749 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 RPS6KC1Q96S38 1066 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 FEZ1Q99689 392 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 IER2Q9BTL4 223 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 NOC4LQ9BVI4 516 aaKnown RBP7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 BRIP1Q9BX63 1249 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 OSBPL7Q9BZF2 842 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 CCDC113Q9H0I3 377 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 COPRSQ9NQ92 184 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 DDX21Q9NR30 783 aaKnown RBP eCLIP7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 KBTBD4Q9NVX7 518 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 PRKAG3Q9UGI9 489 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 MRVI1Q9Y6F6 885 aa7.34□□□□□ -1.23
TMEM39A-212ENST00000497993 CCDC85CA6NKD9 419 aa7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 PHF20L1A8MW92 1017 aa7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 PIK3R2O00459 728 aa7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 CENPBP07199 599 aaPredicted RBP7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 DPEP1P16444 411 aa7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 MASP1P48740 699 aa7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 GPR162Q16538 588 aa7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 TNNI3KQ59H18 835 aa7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 ZNF34Q8IZ26 560 aa7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 HNRNPLLQ8WVV9 542 aaKnown RBP7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 MIS18AQ9NYP9 233 aa7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 FRRS1LQ9P0K9 344 aa7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 PIM2Q9P1W9 311 aa7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 TTF2Q9UNY4 1162 aaKnown RBP7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 STARD13Q9Y3M8 1113 aa7.33□□□□□ -1.24
TMEM39A-212ENST00000497993 UBN2Q6ZU65 1347 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 SPEF2Q9C093 1822 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 ESYT3A0FGR9 886 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 A6NHS1 94 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 CCER2I3L3R5 266 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 PLIN1O60240 522 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 TNFRSF21O75509 655 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 SRGNP10124 158 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 PDE6BP35913 854 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 SOX9P48436 509 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 HYAL2Q12891 473 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 OS9Q13438 667 aaPredicted RBP7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 PARP10Q53GL7 1025 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 STYK1Q6J9G0 422 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 FAM35AQ86V20 835 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 WDR63Q8IWG1 891 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 BEND7Q8N7W2 519 aaPredicted RBP7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 CNBD1Q8NA66 436 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 SNX29Q8TEQ0 813 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 CCDC74AQ96AQ1 378 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 SCARF2Q96GP6 870 aaPredicted RBP7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 RSRP1Q9BUV0 290 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 RBSNQ9H1K0 784 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 RRAGCQ9HB90 399 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 PRDM6Q9NQX0 595 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 CNTN3Q9P232 1028 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 RRP7AQ9Y3A4 280 aaKnown RBP7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 ADAMTSL1Q8N6G6 1762 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 ABCC12Q96J65 1359 aa7.32□□□□□ -1.24
TMEM39A-212ENST00000497993 A0A0G2JLW4 131 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 SH3BP5O60239 455 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 PHACTR2O75167 634 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 KIF4AO95239 1232 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 NTSR2O95665 410 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 VIL1P09327 827 aaKnown RBP7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 HOXB4P17483 251 aaPredicted RBP7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 CES1P23141 567 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 DGKGP49619 791 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 IRX6P78412 446 aaPredicted RBP7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 EXOSC10Q01780 885 aaKnown RBP7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 TRIM28Q13263 835 aaKnown RBP7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 HLFQ16534 295 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 PROSER3Q2NL68 480 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 C4orf46Q504U0 113 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 HSP90AB3PQ58FF7 597 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 C20orf204Q6ZNR8 217 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 TTLL7Q6ZT98 887 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 PODNQ7Z5L7 613 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 RELL1Q8IUW5 271 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 TEX2Q8IWB9 1127 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 MICALL1Q8N3F8 863 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 C1orf127Q8N9H9 656 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 TTC9Q92623 222 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms