RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 MSL3Q8N5Y2 521 aaKnown RBP18■□□□□ 0.47
NUP50-219ENST00000497960 AGBL1Q96MI9 1066 aa18■□□□□ 0.47
NUP50-219ENST00000497960 ZKSCAN3Q9BRR0 538 aa18■□□□□ 0.47
NUP50-219ENST00000497960 GPCPD1Q9NPB8 672 aa18■□□□□ 0.47
NUP50-219ENST00000497960 RNF146Q9NTX7 359 aa18■□□□□ 0.47
NUP50-219ENST00000497960 CNPY2Q9Y2B0 182 aa18■□□□□ 0.47
NUP50-219ENST00000497960 FRMPD2Q68DX3 1309 aaPredicted RBP17.99■□□□□ 0.47
NUP50-219ENST00000497960 DNAJC25-GNG10A0A024R161 153 aa17.99■□□□□ 0.47
NUP50-219ENST00000497960 ALAS1P13196 640 aa17.99■□□□□ 0.47
NUP50-219ENST00000497960 SLC16A2P36021 539 aa17.99■□□□□ 0.47
NUP50-219ENST00000497960 SYDE2Q5VT97 1194 aa17.99■□□□□ 0.47
NUP50-219ENST00000497960 TTBK2Q6IQ55 1244 aa17.99■□□□□ 0.47
NUP50-219ENST00000497960 BTNL9Q6UXG8 535 aa17.99■□□□□ 0.47
NUP50-219ENST00000497960 ARRDC4Q8NCT1 418 aa17.99■□□□□ 0.47
NUP50-219ENST00000497960 ZSCAN10Q96SZ4 725 aaPredicted RBP17.99■□□□□ 0.47
NUP50-219ENST00000497960 U3KPZ7 1027 aaPredicted RBP17.99■□□□□ 0.47
NUP50-219ENST00000497960 ZNF536O15090 1300 aa17.98■□□□□ 0.47
NUP50-219ENST00000497960 LAMA4Q16363 1823 aa17.98■□□□□ 0.47
NUP50-219ENST00000497960 SNAP25P60880 206 aa17.98■□□□□ 0.47
NUP50-219ENST00000497960 ZNF543Q08ER8 600 aa17.98■□□□□ 0.47
NUP50-219ENST00000497960 TRDNQ13061 729 aa17.98■□□□□ 0.47
NUP50-219ENST00000497960 ZNF467Q7Z7K2 595 aaPredicted RBP17.98■□□□□ 0.47
NUP50-219ENST00000497960 TRERF1Q96PN7 1200 aa17.98■□□□□ 0.47
NUP50-219ENST00000497960 UBAC1Q9BSL1 405 aa17.98■□□□□ 0.47
NUP50-219ENST00000497960 KAT14Q9H8E8 782 aa17.98■□□□□ 0.47
NUP50-219ENST00000497960 ZSWIM5Q9P217 1185 aa17.98■□□□□ 0.47
NUP50-219ENST00000497960 CCPG1Q9ULG6 757 aa17.98■□□□□ 0.47
NUP50-219ENST00000497960 SGSM2O43147 1006 aa17.97■□□□□ 0.47
NUP50-219ENST00000497960 CDC45O75419 566 aa17.97■□□□□ 0.47
NUP50-219ENST00000497960 ICAM1P05362 532 aa17.97■□□□□ 0.47
NUP50-219ENST00000497960 COL6A1P12109 1028 aa17.97■□□□□ 0.47
NUP50-219ENST00000497960 ANO1Q5XXA6 986 aa17.97■□□□□ 0.47
NUP50-219ENST00000497960 CASC1Q6TDU7 716 aa17.97■□□□□ 0.47
NUP50-219ENST00000497960 ANKS1AQ92625 1134 aa17.97■□□□□ 0.47
NUP50-219ENST00000497960 RANBP17Q9H2T7 1088 aaKnown RBP17.97■□□□□ 0.47
NUP50-219ENST00000497960 PNMA2Q9UL42 364 aa17.97■□□□□ 0.47
NUP50-219ENST00000497960 PFASO15067 1338 aa17.97■□□□□ 0.47
NUP50-219ENST00000497960 SYNGAP1Q96PV0 1343 aa17.97■□□□□ 0.47
NUP50-219ENST00000497960 POTEB2H3BUK9 544 aa17.96■□□□□ 0.47
NUP50-219ENST00000497960 DNM1LO00429 736 aa17.96■□□□□ 0.47
NUP50-219ENST00000497960 MYCNP04198 464 aaPredicted RBP17.96■□□□□ 0.47
NUP50-219ENST00000497960 SNHG28P0DPA3 235 aa17.96■□□□□ 0.47
NUP50-219ENST00000497960 RARBP10826 455 aa17.96■□□□□ 0.47
NUP50-219ENST00000497960 PTH1RQ03431 593 aa17.96■□□□□ 0.47
NUP50-219ENST00000497960 GPATCH4Q5T3I0 446 aaKnown RBP17.96■□□□□ 0.47
NUP50-219ENST00000497960 MAMDC4Q6UXC1 1216 aa17.96■□□□□ 0.47
NUP50-219ENST00000497960 KIAA1211Q6ZU35 1233 aa17.96■□□□□ 0.47
NUP50-219ENST00000497960 PNMA1Q8ND90 353 aa17.96■□□□□ 0.47
NUP50-219ENST00000497960 A1CFQ9NQ94 594 aaKnown RBP17.96■□□□□ 0.47
NUP50-219ENST00000497960 TNKSO95271 1327 aa17.96■□□□□ 0.46
NUP50-219ENST00000497960 PLXNA1Q9UIW2 1896 aa17.95■□□□□ 0.46
NUP50-219ENST00000497960 KBTBD13C9JR72 458 aa17.95■□□□□ 0.46
NUP50-219ENST00000497960 AKR1A1P14550 325 aa17.95■□□□□ 0.46
NUP50-219ENST00000497960 TAL1P17542 331 aaPredicted RBP17.95■□□□□ 0.46
NUP50-219ENST00000497960 C7orf61Q8IZ16 206 aa17.95■□□□□ 0.46
NUP50-219ENST00000497960 ENAHQ8N8S7 591 aaPredicted RBP17.95■□□□□ 0.46
NUP50-219ENST00000497960 SENP6Q9GZR1 1112 aaPredicted RBP17.95■□□□□ 0.46
NUP50-219ENST00000497960 SNAI1O95863 264 aaPredicted RBP17.94■□□□□ 0.46
NUP50-219ENST00000497960 CYP21A2P08686 494 aa17.94■□□□□ 0.46
NUP50-219ENST00000497960 ZNF865P0CJ78 1059 aaPredicted RBP17.94■□□□□ 0.46
NUP50-219ENST00000497960 GJC2Q5T442 439 aaPredicted RBP17.94■□□□□ 0.46
NUP50-219ENST00000497960 IFIT1BQ5T764 474 aaKnown RBP17.94■□□□□ 0.46
NUP50-219ENST00000497960 XPNPEP3Q9NQH7 507 aa17.94■□□□□ 0.46
NUP50-219ENST00000497960 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.94■□□□□ 0.46
NUP50-219ENST00000497960 ZHX1Q9UKY1 873 aaPredicted RBP17.94■□□□□ 0.46
NUP50-219ENST00000497960 FAM184BQ9ULE4 1060 aa17.94■□□□□ 0.46
NUP50-219ENST00000497960 COLQQ9Y215 455 aaPredicted RBP17.94■□□□□ 0.46
NUP50-219ENST00000497960 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
NUP50-219ENST00000497960 GOLGA8HP0CJ92 632 aa17.93■□□□□ 0.46
NUP50-219ENST00000497960 CNTN2Q02246 1040 aa17.93■□□□□ 0.46
NUP50-219ENST00000497960 MUM1L1Q5H9M0 696 aa17.93■□□□□ 0.46
NUP50-219ENST00000497960 HABP4Q5JVS0 413 aaKnown RBP17.93■□□□□ 0.46
NUP50-219ENST00000497960 CHRDL2Q6WN34 429 aa17.93■□□□□ 0.46
NUP50-219ENST00000497960 NSMFQ6X4W1 530 aa17.93■□□□□ 0.46
NUP50-219ENST00000497960 ARMCX2Q7L311 632 aa17.93■□□□□ 0.46
NUP50-219ENST00000497960 RALYLQ86SE5 291 aaKnown RBP17.93■□□□□ 0.46
NUP50-219ENST00000497960 FAM133AQ8N9E0 248 aa17.93■□□□□ 0.46
NUP50-219ENST00000497960 ABHD16BQ9H3Z7 469 aa17.93■□□□□ 0.46
NUP50-219ENST00000497960 ASB14A6NK59 587 aa17.92■□□□□ 0.46
NUP50-219ENST00000497960 PARP1P09874 1014 aaKnown RBP17.92■□□□□ 0.46
NUP50-219ENST00000497960 ACVR2BQ13705 512 aa17.92■□□□□ 0.46
NUP50-219ENST00000497960 LRRC41Q15345 812 aa17.92■□□□□ 0.46
NUP50-219ENST00000497960 ASPRV1Q53RT3 343 aa17.92■□□□□ 0.46
NUP50-219ENST00000497960 RNF180Q86T96 592 aa17.92■□□□□ 0.46
NUP50-219ENST00000497960 NCOA7Q8NI08 942 aa17.92■□□□□ 0.46
NUP50-219ENST00000497960 MAP4K1Q92918 833 aa17.92■□□□□ 0.46
NUP50-219ENST00000497960 FGD4Q96M96 766 aa17.92■□□□□ 0.46
NUP50-219ENST00000497960 UBA5Q9GZZ9 404 aa17.92■□□□□ 0.46
NUP50-219ENST00000497960 CYP39A1Q9NYL5 469 aa17.92■□□□□ 0.46
NUP50-219ENST00000497960 TRIOBPQ9H2D6 2365 aa17.92■□□□□ 0.46
NUP50-219ENST00000497960 FRMPD3Q5JV73 1810 aa17.91■□□□□ 0.46
NUP50-219ENST00000497960 ERICH2A1L162 156 aa17.91■□□□□ 0.46
NUP50-219ENST00000497960 LRRC26Q2I0M4 334 aa17.91■□□□□ 0.46
NUP50-219ENST00000497960 CYB5R4Q7L1T6 521 aa17.91■□□□□ 0.46
NUP50-219ENST00000497960 CCDC144CPQ8IYA2 1237 aa17.91■□□□□ 0.46
NUP50-219ENST00000497960 ESYT1Q9BSJ8 1104 aa17.91■□□□□ 0.46
NUP50-219ENST00000497960 ZMYND8Q9ULU4 1186 aaPredicted RBP17.91■□□□□ 0.46
NUP50-219ENST00000497960 RBM8AQ9Y5S9 174 aaKnown RBP17.91■□□□□ 0.46
NUP50-219ENST00000497960 WDR19Q8NEZ3 1342 aa17.91■□□□□ 0.46
NUP50-219ENST00000497960 SOWAHBA6NEL2 793 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms