RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 FBXL18Q96ME1 805 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 AGBL1Q96MI9 1066 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 TRPV6Q9H1D0 765 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 ABHD16BQ9H3Z7 469 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 MCM9Q9NXL9 1143 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 TLR7Q9NYK1 1049 aaKnown RBP12.66□□□□□ -0.38
TOM1-217ENST00000497448 DBNLQ9UJU6 430 aaKnown RBP12.66□□□□□ -0.38
TOM1-217ENST00000497448 ZNF318Q5VUA4 2279 aa12.65□□□□□ -0.38
TOM1-217ENST00000497448 GRIN2DO15399 1336 aa12.65□□□□□ -0.38
TOM1-217ENST00000497448 PFKMP08237 780 aa12.65□□□□□ -0.38
TOM1-217ENST00000497448 CYP2D6P10635 497 aa12.65□□□□□ -0.38
TOM1-217ENST00000497448 ITGA7Q13683 1181 aa12.65□□□□□ -0.38
TOM1-217ENST00000497448 SNRNP48Q6IEG0 339 aaKnown RBP12.65□□□□□ -0.38
TOM1-217ENST00000497448 ARMCX2Q7L311 632 aa12.65□□□□□ -0.38
TOM1-217ENST00000497448 GJD3Q8N144 294 aa12.65□□□□□ -0.38
TOM1-217ENST00000497448 DDX11Q96FC9 970 aa12.65□□□□□ -0.38
TOM1-217ENST00000497448 SLC9A7Q96T83 725 aa12.65□□□□□ -0.38
TOM1-217ENST00000497448 TEX13BQ9BXU2 312 aa12.65□□□□□ -0.38
TOM1-217ENST00000497448 KATNBL1Q9H079 304 aa12.65□□□□□ -0.38
TOM1-217ENST00000497448 ANTXR1Q9H6X2 564 aa12.65□□□□□ -0.38
TOM1-217ENST00000497448 RIPK3Q9Y572 518 aa12.65□□□□□ -0.38
TOM1-217ENST00000497448 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.64□□□□□ -0.39
TOM1-217ENST00000497448 FAM83BQ5T0W9 1011 aa12.64□□□□□ -0.39
TOM1-217ENST00000497448 FAM178BQ8IXR5 827 aa12.64□□□□□ -0.39
TOM1-217ENST00000497448 DYNLL2Q96FJ2 89 aa12.64□□□□□ -0.39
TOM1-217ENST00000497448 KCNH6Q9H252 994 aa12.64□□□□□ -0.39
TOM1-217ENST00000497448 SWAP70Q9UH65 585 aa12.64□□□□□ -0.39
TOM1-217ENST00000497448 SIP14410 1827 aa12.64□□□□□ -0.39
TOM1-217ENST00000497448 MAGEB6P1A0A0J9YX57 407 aa12.63□□□□□ -0.39
TOM1-217ENST00000497448 CABYRO75952 493 aa12.63□□□□□ -0.39
TOM1-217ENST00000497448 PTGS1P23219 599 aa12.63□□□□□ -0.39
TOM1-217ENST00000497448 SSTR3P32745 418 aaPredicted RBP12.63□□□□□ -0.39
TOM1-217ENST00000497448 CSPP1Q1MSJ5 1256 aa12.63□□□□□ -0.39
TOM1-217ENST00000497448 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.63□□□□□ -0.39
TOM1-217ENST00000497448 DEFB128Q7Z7B8 93 aa12.63□□□□□ -0.39
TOM1-217ENST00000497448 TLK2Q86UE8 772 aa12.63□□□□□ -0.39
TOM1-217ENST00000497448 GDPD5Q8WTR4 605 aa12.63□□□□□ -0.39
TOM1-217ENST00000497448 SDR42E1Q8WUS8 393 aa12.63□□□□□ -0.39
TOM1-217ENST00000497448 UBE2ZQ9H832 354 aaPredicted RBP12.63□□□□□ -0.39
TOM1-217ENST00000497448 DCP1AQ9NPI6 582 aaPredicted RBP12.63□□□□□ -0.39
TOM1-217ENST00000497448 GNAI2P04899 355 aa12.62□□□□□ -0.39
TOM1-217ENST00000497448 EEF2P13639 858 aaKnown RBP12.62□□□□□ -0.39
TOM1-217ENST00000497448 ALADP13716 330 aa12.62□□□□□ -0.39
TOM1-217ENST00000497448 IL9P15248 144 aa12.62□□□□□ -0.39
TOM1-217ENST00000497448 PSMC6P62333 389 aa12.62□□□□□ -0.39
TOM1-217ENST00000497448 SLFN5Q08AF3 891 aa12.62□□□□□ -0.39
TOM1-217ENST00000497448 TMED8Q6PL24 325 aaPredicted RBP12.62□□□□□ -0.39
TOM1-217ENST00000497448 HERC6Q8IVU3 1022 aa12.62□□□□□ -0.39
TOM1-217ENST00000497448 CCDC144CPQ8IYA2 1237 aa12.62□□□□□ -0.39
TOM1-217ENST00000497448 CRNKL1Q9BZJ0 848 aaKnown RBP12.62□□□□□ -0.39
TOM1-217ENST00000497448 GOPCQ9HD26 462 aa12.62□□□□□ -0.39
TOM1-217ENST00000497448 GNEQ9Y223 722 aaKnown RBP12.62□□□□□ -0.39
TOM1-217ENST00000497448 TET1Q8NFU7 2136 aa12.61□□□□□ -0.39
TOM1-217ENST00000497448 LCTP09848 1927 aa12.61□□□□□ -0.39
TOM1-217ENST00000497448 CYP2C9P11712 490 aa12.61□□□□□ -0.39
TOM1-217ENST00000497448 ACTN1P12814 892 aa12.61□□□□□ -0.39
TOM1-217ENST00000497448 HNRNPUQ00839 825 aaKnown RBP eCLIP12.61□□□□□ -0.39
TOM1-217ENST00000497448 TNFAIP2Q03169 654 aa12.61□□□□□ -0.39
TOM1-217ENST00000497448 OS9Q13438 667 aaPredicted RBP12.61□□□□□ -0.39
TOM1-217ENST00000497448 FSCN1Q16658 493 aaKnown RBP12.61□□□□□ -0.39
TOM1-217ENST00000497448 LEXMQ3ZCV2 418 aa12.61□□□□□ -0.39
TOM1-217ENST00000497448 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.61□□□□□ -0.39
TOM1-217ENST00000497448 PHOSPHO2Q8TCD6 241 aa12.61□□□□□ -0.39
TOM1-217ENST00000497448 PHOX2BQ99453 314 aa12.61□□□□□ -0.39
TOM1-217ENST00000497448 NUP88Q99567 741 aaPredicted RBP12.61□□□□□ -0.39
TOM1-217ENST00000497448 SLF1Q9BQI6 1058 aa12.61□□□□□ -0.39
TOM1-217ENST00000497448 SEZ6LQ9BYH1 1024 aa12.61□□□□□ -0.39
TOM1-217ENST00000497448 CCDC8Q9H0W5 538 aaPredicted RBP12.61□□□□□ -0.39
TOM1-217ENST00000497448 ALDH8A1Q9H2A2 487 aaPredicted RBP12.61□□□□□ -0.39
TOM1-217ENST00000497448 CFAP54Q96N23 3096 aa12.61□□□□□ -0.39
TOM1-217ENST00000497448 MYH4Q9Y623 1939 aa12.6□□□□□ -0.39
TOM1-217ENST00000497448 RAD21O60216 631 aa12.6□□□□□ -0.39
TOM1-217ENST00000497448 SLC4A3P48751 1232 aa12.6□□□□□ -0.39
TOM1-217ENST00000497448 POLA2Q14181 598 aa12.6□□□□□ -0.39
TOM1-217ENST00000497448 NOL8Q76FK4 1167 aaKnown RBP12.6□□□□□ -0.39
TOM1-217ENST00000497448 ANKRD35Q8N283 1001 aa12.6□□□□□ -0.39
TOM1-217ENST00000497448 LCORLQ8N3X6 602 aa12.6□□□□□ -0.39
TOM1-217ENST00000497448 ANKS1AQ92625 1134 aa12.6□□□□□ -0.39
TOM1-217ENST00000497448 TRMT13Q9NUP7 481 aaKnown RBP12.6□□□□□ -0.39
TOM1-217ENST00000497448 LMCD1Q9NZU5 365 aa12.6□□□□□ -0.39
TOM1-217ENST00000497448 ZNF536O15090 1300 aa12.6□□□□□ -0.39
TOM1-217ENST00000497448 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.59□□□□□ -0.39
TOM1-217ENST00000497448 LCHNA4D1U4 455 aa12.59□□□□□ -0.39
TOM1-217ENST00000497448 ATP2A1O14983 1001 aa12.59□□□□□ -0.39
TOM1-217ENST00000497448 DCXO43602 365 aa12.59□□□□□ -0.39
TOM1-217ENST00000497448 KCNA5P22460 613 aa12.59□□□□□ -0.39
TOM1-217ENST00000497448 CPXCR1Q8N123 301 aa12.59□□□□□ -0.39
TOM1-217ENST00000497448 EAF2Q96CJ1 260 aaPredicted RBP12.59□□□□□ -0.39
TOM1-217ENST00000497448 CCDC17Q96LX7 622 aa12.59□□□□□ -0.39
TOM1-217ENST00000497448 SCN10AQ9Y5Y9 1956 aa12.59□□□□□ -0.39
TOM1-217ENST00000497448 TNKSO95271 1327 aa12.59□□□□□ -0.39
TOM1-217ENST00000497448 KIF28PB7ZC32 967 aa12.58□□□□□ -0.4
TOM1-217ENST00000497448 ZEB2O60315 1214 aa12.58□□□□□ -0.4
TOM1-217ENST00000497448 PDE6AP16499 860 aa12.58□□□□□ -0.4
TOM1-217ENST00000497448 SMPD1P17405 629 aa12.58□□□□□ -0.4
TOM1-217ENST00000497448 RFC2P35250 354 aa12.58□□□□□ -0.4
TOM1-217ENST00000497448 CDK8P49336 464 aa12.58□□□□□ -0.4
TOM1-217ENST00000497448 CNTN2Q02246 1040 aa12.58□□□□□ -0.4
TOM1-217ENST00000497448 PTCRAQ6ISU1 281 aaPredicted RBP12.58□□□□□ -0.4
TOM1-217ENST00000497448 AP5M1Q9H0R1 490 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms