RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 KCNQ5Q9NR82 932 aa8.35□□□□□ -1.07
MSH5-219ENST00000497269 THRAP3Q9Y2W1 955 aaKnown RBP8.35□□□□□ -1.07
MSH5-219ENST00000497269 PCDHB14Q9Y5E9 798 aa8.35□□□□□ -1.07
MSH5-219ENST00000497269 KTN1Q86UP2 1357 aaKnown RBP8.35□□□□□ -1.07
MSH5-219ENST00000497269 PIK3C2AO00443 1686 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 EXOC5O00471 708 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 H2AFB1P0C5Y9 115 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 H2AFB2P0C5Z0 115 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 ADMP35318 185 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 PDE4BQ07343 736 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 ARHGEF25Q86VW2 580 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 NT5C1AQ9BXI3 368 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 SLC12A5Q9H2X9 1139 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 SPON1Q9HCB6 807 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 IGSF5Q9NSI5 407 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 PRKAG2Q9UGJ0 569 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 NUP188Q5SRE5 1749 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 AATKQ6ZMQ8 1374 aa8.34□□□□□ -1.07
MSH5-219ENST00000497269 WDR17Q8IZU2 1322 aa8.33□□□□□ -1.08
MSH5-219ENST00000497269 DISP2A7MBM2 1401 aa8.33□□□□□ -1.08
MSH5-219ENST00000497269 YY1P25490 414 aa8.33□□□□□ -1.08
MSH5-219ENST00000497269 CLCQ05315 142 aa8.33□□□□□ -1.08
MSH5-219ENST00000497269 NFIAQ12857 509 aa8.33□□□□□ -1.08
MSH5-219ENST00000497269 FBXW10Q5XX13 1052 aa8.33□□□□□ -1.08
MSH5-219ENST00000497269 TOP6BLQ8N6T0 577 aa8.33□□□□□ -1.08
MSH5-219ENST00000497269 GPRASP2Q96D09 838 aa8.33□□□□□ -1.08
MSH5-219ENST00000497269 CARD11Q9BXL7 1154 aa8.33□□□□□ -1.08
MSH5-219ENST00000497269 C1GALT1Q9NS00 363 aa8.33□□□□□ -1.08
MSH5-219ENST00000497269 REV1Q9UBZ9 1251 aa8.33□□□□□ -1.08
MSH5-219ENST00000497269 COL18A1P39060 1754 aa8.33□□□□□ -1.08
MSH5-219ENST00000497269 TRPM1Q7Z4N2 1603 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 FAM170BA6NMN3 283 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 UPK3BL1B0FP48 263 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 WDR64B1ANS9 1081 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 UPK3BL2E5RIL1 263 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 HTR3BO95264 441 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 IGLV1-40P01703 118 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 TXNRD1Q16881 649 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 PRSS36Q5K4E3 855 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 RNF43Q68DV7 783 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 CCDC81Q6ZN84 652 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 ARMCX6Q7L4S7 300 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 HID1Q8IV36 788 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 KCNH5Q8NCM2 988 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 FAM13CQ8NE31 585 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 TJP2Q9UDY2 1190 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 RREB1Q92766 1687 aa8.32□□□□□ -1.08
MSH5-219ENST00000497269 SBF2Q86WG5 1849 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 OVOS2A0A0G2JMS6 1433 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 OVOS2A0A0J9YW53 1432 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 CPSF1Q10570 1443 aaKnown RBP8.31□□□□□ -1.08
MSH5-219ENST00000497269 OVOS2Q6IE36 1432 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 SLIT3O75094 1523 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 RBAK-RBAKDNI3L0D1 243 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 LEFTY1O75610 366 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 FAM87AP0C7U9 286 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 PRAMEF13Q5VWM6 474 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 SHKBP1Q8TBC3 707 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 ACSF2Q96CM8 615 aaPredicted RBP8.31□□□□□ -1.08
MSH5-219ENST00000497269 LRRC3Q9BY71 257 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 GINM1Q9NU53 330 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 PPT2Q9UMR5 302 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 EFR3BQ9Y2G0 817 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 LRRC37A3O60309 1634 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 PARP4Q9UKK3 1724 aaKnown RBP8.31□□□□□ -1.08
MSH5-219ENST00000497269 KAT6BQ8WYB5 2073 aa8.31□□□□□ -1.08
MSH5-219ENST00000497269 K7ELQ4 463 aaPredicted RBP8.3□□□□□ -1.08
MSH5-219ENST00000497269 PLSCR1O15162 318 aa8.3□□□□□ -1.08
MSH5-219ENST00000497269 F13BP05160 661 aa8.3□□□□□ -1.08
MSH5-219ENST00000497269 SLBPQ14493 270 aaKnown RBP eCLIP8.3□□□□□ -1.08
MSH5-219ENST00000497269 SEZ6L2Q6UXD5 910 aa8.3□□□□□ -1.08
MSH5-219ENST00000497269 ZAR1Q86SH2 424 aa8.3□□□□□ -1.08
MSH5-219ENST00000497269 KCT2Q8NC54 265 aa8.3□□□□□ -1.08
MSH5-219ENST00000497269 TMEM87BQ96K49 555 aa8.3□□□□□ -1.08
MSH5-219ENST00000497269 FERD3LQ96RJ6 166 aa8.3□□□□□ -1.08
MSH5-219ENST00000497269 MIPEPQ99797 713 aa8.3□□□□□ -1.08
MSH5-219ENST00000497269 DBNDD2Q9BQY9 259 aa8.3□□□□□ -1.08
MSH5-219ENST00000497269 PEAK1Q9H792 1746 aa8.29□□□□□ -1.08
MSH5-219ENST00000497269 CHURC1-FNTBB4DL54 471 aa8.29□□□□□ -1.08
MSH5-219ENST00000497269 DNAJA2O60884 412 aa8.29□□□□□ -1.08
MSH5-219ENST00000497269 ZNF165P49910 485 aa8.29□□□□□ -1.08
MSH5-219ENST00000497269 ZNF765Q7L2R6 523 aa8.29□□□□□ -1.08
MSH5-219ENST00000497269 HDGFL2Q7Z4V5 671 aaPredicted RBP8.29□□□□□ -1.08
MSH5-219ENST00000497269 SLITRK4Q8IW52 837 aa8.29□□□□□ -1.08
MSH5-219ENST00000497269 SYTL4Q96C24 671 aaPredicted RBP8.29□□□□□ -1.08
MSH5-219ENST00000497269 FOXQ1Q9C009 403 aa8.29□□□□□ -1.08
MSH5-219ENST00000497269 ANTXR1Q9H6X2 564 aa8.29□□□□□ -1.08
MSH5-219ENST00000497269 STK32BQ9NY57 414 aa8.29□□□□□ -1.08
MSH5-219ENST00000497269 PARD3Q8TEW0 1356 aa8.29□□□□□ -1.08
MSH5-219ENST00000497269 AKAP12Q02952 1782 aa8.29□□□□□ -1.08
MSH5-219ENST00000497269 TTC21AQ8NDW8 1320 aa8.29□□□□□ -1.08
MSH5-219ENST00000497269 BRD4O60885 1362 aaPredicted RBP8.28□□□□□ -1.08
MSH5-219ENST00000497269 FAM86C2PA6NEL3 165 aa8.28□□□□□ -1.08
MSH5-219ENST00000497269 NASPP49321 788 aaPredicted RBP8.28□□□□□ -1.08
MSH5-219ENST00000497269 SLC15A2Q16348 729 aa8.28□□□□□ -1.08
MSH5-219ENST00000497269 OSBPL1AQ9BXW6 950 aa8.28□□□□□ -1.08
MSH5-219ENST00000497269 LRRC4CQ9HCJ2 640 aa8.28□□□□□ -1.08
MSH5-219ENST00000497269 ATG3Q9NT62 314 aa8.28□□□□□ -1.08
MSH5-219ENST00000497269 ST20-MTHFSA0A0A6YYL1 179 aa8.27□□□□□ -1.09
MSH5-219ENST00000497269 LRIG2O94898 1065 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms