RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 FLT4P35916 1363 aa6.59□□□□□ -1.35
CSMD3-208ENST00000497026 KIF24Q5T7B8 1368 aa6.59□□□□□ -1.35
CSMD3-208ENST00000497026 EIF4BP23588 611 aaKnown RBP6.59□□□□□ -1.36
CSMD3-208ENST00000497026 NTF4P34130 210 aa6.59□□□□□ -1.36
CSMD3-208ENST00000497026 CD96P40200 585 aa6.59□□□□□ -1.36
CSMD3-208ENST00000497026 CDK8P49336 464 aa6.59□□□□□ -1.36
CSMD3-208ENST00000497026 LRRC14Q15048 493 aa6.59□□□□□ -1.36
CSMD3-208ENST00000497026 MAP3K11Q16584 847 aa6.59□□□□□ -1.36
CSMD3-208ENST00000497026 ERICH6BQ5W0A0 696 aa6.59□□□□□ -1.36
CSMD3-208ENST00000497026 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.59□□□□□ -1.36
CSMD3-208ENST00000497026 ARHGAP27Q6ZUM4 889 aa6.59□□□□□ -1.36
CSMD3-208ENST00000497026 SND1Q7KZF4 910 aaKnown RBP eCLIP6.59□□□□□ -1.36
CSMD3-208ENST00000497026 DEFB132Q7Z7B7 95 aa6.59□□□□□ -1.36
CSMD3-208ENST00000497026 BCL7CQ8WUZ0 217 aaPredicted RBP6.59□□□□□ -1.36
CSMD3-208ENST00000497026 FBXL18Q96ME1 805 aa6.59□□□□□ -1.36
CSMD3-208ENST00000497026 MEGF6O75095 1541 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 RGPD3A6NKT7 1758 aaPredicted RBP6.58□□□□□ -1.36
CSMD3-208ENST00000497026 RGPD4Q7Z3J3 1758 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 OVOS2A0A0G2JMS6 1433 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 NCAPD2Q15021 1401 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 NUP188Q5SRE5 1749 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 NSD2O96028 1365 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 INSRP06213 1382 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 NHSQ6T4R5 1651 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 PATL2C9JE40 543 aaKnown RBP6.58□□□□□ -1.36
CSMD3-208ENST00000497026 RBAK-RBAKDNI3L0D1 243 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 PRPF40AO75400 957 aaKnown RBP6.58□□□□□ -1.36
CSMD3-208ENST00000497026 ITIH2P19823 946 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 GNA15P30679 374 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 AMPHP49418 695 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 HSP90AB2PQ58FF8 381 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 ELMO3Q96BJ8 720 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 SLC5A6Q9Y289 635 aa6.58□□□□□ -1.36
CSMD3-208ENST00000497026 PKD1L3Q7Z443 1732 aa6.57□□□□□ -1.36
CSMD3-208ENST00000497026 BCL9O00512 1426 aa6.57□□□□□ -1.36
CSMD3-208ENST00000497026 PRAMEF27A3QJZ7 478 aa6.57□□□□□ -1.36
CSMD3-208ENST00000497026 DDB1Q16531 1140 aa6.57□□□□□ -1.36
CSMD3-208ENST00000497026 EAPPQ56P03 285 aaPredicted RBP6.57□□□□□ -1.36
CSMD3-208ENST00000497026 ZBTB37Q5TC79 503 aa6.57□□□□□ -1.36
CSMD3-208ENST00000497026 TTBK2Q6IQ55 1244 aa6.57□□□□□ -1.36
CSMD3-208ENST00000497026 LRFN4Q6PJG9 635 aa6.57□□□□□ -1.36
CSMD3-208ENST00000497026 FAM196AQ6ZSG2 479 aa6.57□□□□□ -1.36
CSMD3-208ENST00000497026 MARCH10Q8NA82 808 aaPredicted RBP6.57□□□□□ -1.36
CSMD3-208ENST00000497026 LTV1Q96GA3 475 aaPredicted RBP6.57□□□□□ -1.36
CSMD3-208ENST00000497026 CYP8B1Q9UNU6 501 aa6.57□□□□□ -1.36
CSMD3-208ENST00000497026 DOT1LQ8TEK3 1739 aa6.57□□□□□ -1.36
CSMD3-208ENST00000497026 IL2RBP14784 551 aa6.56□□□□□ -1.36
CSMD3-208ENST00000497026 RING1Q06587 406 aa6.56□□□□□ -1.36
CSMD3-208ENST00000497026 CCDC85BQ15834 202 aaPredicted RBP6.56□□□□□ -1.36
CSMD3-208ENST00000497026 MEI1Q5TIA1 1274 aa6.56□□□□□ -1.36
CSMD3-208ENST00000497026 NBPF6Q5VWK0 638 aa6.56□□□□□ -1.36
CSMD3-208ENST00000497026 SV2BQ7L1I2 683 aa6.56□□□□□ -1.36
CSMD3-208ENST00000497026 CDC37L1Q7L3B6 337 aa6.56□□□□□ -1.36
CSMD3-208ENST00000497026 PTF1AQ7RTS3 328 aa6.56□□□□□ -1.36
CSMD3-208ENST00000497026 WFDC3Q8IUB2 231 aa6.56□□□□□ -1.36
CSMD3-208ENST00000497026 NETO1Q8TDF5 533 aa6.56□□□□□ -1.36
CSMD3-208ENST00000497026 PLPPR2Q96GM1 343 aa6.56□□□□□ -1.36
CSMD3-208ENST00000497026 NBPF4Q96M43 638 aa6.56□□□□□ -1.36
CSMD3-208ENST00000497026 HEXIM2Q96MH2 286 aaKnown RBP6.56□□□□□ -1.36
CSMD3-208ENST00000497026 POLKQ9UBT6 870 aa6.56□□□□□ -1.36
CSMD3-208ENST00000497026 PCDHB5Q9Y5E4 795 aa6.56□□□□□ -1.36
CSMD3-208ENST00000497026 TOGARAM1Q9Y4F4 1720 aa6.55□□□□□ -1.36
CSMD3-208ENST00000497026 BTAF1O14981 1849 aa6.55□□□□□ -1.36
CSMD3-208ENST00000497026 OXCT1P55809 520 aa6.55□□□□□ -1.36
CSMD3-208ENST00000497026 SEPT6Q14141 434 aa6.55□□□□□ -1.36
CSMD3-208ENST00000497026 PLCL1Q15111 1095 aa6.55□□□□□ -1.36
CSMD3-208ENST00000497026 USHBP1Q8N6Y0 703 aa6.55□□□□□ -1.36
CSMD3-208ENST00000497026 FAM161BQ96MY7 647 aa6.55□□□□□ -1.36
CSMD3-208ENST00000497026 PRDM10Q9NQV6 1147 aa6.55□□□□□ -1.36
CSMD3-208ENST00000497026 PLAGL2Q9UPG8 496 aa6.55□□□□□ -1.36
CSMD3-208ENST00000497026 AK5Q9Y6K8 562 aa6.55□□□□□ -1.36
CSMD3-208ENST00000497026 EXOC5O00471 708 aa6.54□□□□□ -1.36
CSMD3-208ENST00000497026 CD8BP10966 210 aa6.54□□□□□ -1.36
CSMD3-208ENST00000497026 TNNT2P45379 298 aaPredicted RBP6.54□□□□□ -1.36
CSMD3-208ENST00000497026 WIPI1Q5MNZ9 446 aaPredicted RBP6.54□□□□□ -1.36
CSMD3-208ENST00000497026 GAL3ST3Q96A11 431 aa6.54□□□□□ -1.36
CSMD3-208ENST00000497026 FRMD6Q96NE9 622 aa6.54□□□□□ -1.36
CSMD3-208ENST00000497026 FBRSQ9HAH7 460 aa6.54□□□□□ -1.36
CSMD3-208ENST00000497026 PARP2Q9UGN5 583 aa6.54□□□□□ -1.36
CSMD3-208ENST00000497026 FANCGO15287 622 aa6.53□□□□□ -1.36
CSMD3-208ENST00000497026 PPM1GO15355 546 aaPredicted RBP6.53□□□□□ -1.36
CSMD3-208ENST00000497026 TAGLNQ01995 201 aaKnown RBP6.53□□□□□ -1.36
CSMD3-208ENST00000497026 EZH2Q15910 746 aaKnown RBP6.53□□□□□ -1.36
CSMD3-208ENST00000497026 AOC3Q16853 763 aa6.53□□□□□ -1.36
CSMD3-208ENST00000497026 ARMCX6Q7L4S7 300 aa6.53□□□□□ -1.36
CSMD3-208ENST00000497026 AGBL5Q8NDL9 886 aa6.53□□□□□ -1.36
CSMD3-208ENST00000497026 CAMKK2Q96RR4 588 aa6.53□□□□□ -1.36
CSMD3-208ENST00000497026 KRTAP4-11Q9BYQ6 195 aa6.53□□□□□ -1.36
CSMD3-208ENST00000497026 KNSTRNQ9Y448 316 aa6.53□□□□□ -1.36
CSMD3-208ENST00000497026 NPC1L1Q9UHC9 1359 aa6.53□□□□□ -1.36
CSMD3-208ENST00000497026 F6X3S4 739 aa6.52□□□□□ -1.37
CSMD3-208ENST00000497026 KCNQ2O43526 872 aa6.52□□□□□ -1.37
CSMD3-208ENST00000497026 CEACAM5P06731 702 aa6.52□□□□□ -1.37
CSMD3-208ENST00000497026 EIF4A2Q14240 407 aaKnown RBP6.52□□□□□ -1.37
CSMD3-208ENST00000497026 NKG7Q16617 165 aa6.52□□□□□ -1.37
CSMD3-208ENST00000497026 IFI16Q16666 785 aaKnown RBP6.52□□□□□ -1.37
CSMD3-208ENST00000497026 CBLL1Q75N03 491 aa6.52□□□□□ -1.37
CSMD3-208ENST00000497026 CYFIP1Q7L576 1253 aa6.52□□□□□ -1.37
CSMD3-208ENST00000497026 FAM214BQ7L5A3 538 aa6.52□□□□□ -1.37
CSMD3-208ENST00000497026 HDXQ7Z353 690 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms