RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 HOMER2Q9NSB8 354 aa16.88■□□□□ 0.29
VTI1A-209ENST00000496445 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
VTI1A-209ENST00000496445 KBTBD13C9JR72 458 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 SNAI1O95863 264 aaPredicted RBP16.87■□□□□ 0.29
VTI1A-209ENST00000496445 FDX1P10109 184 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 PDE4AP27815 886 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 SNAP25P60880 206 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 RCSD1Q6JBY9 416 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 MSL3Q8N5Y2 521 aaKnown RBP16.87■□□□□ 0.29
VTI1A-209ENST00000496445 CHURC1Q8WUH1 139 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 DDX11Q96FC9 970 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 AGBL1Q96MI9 1066 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 TMEM47Q9BQJ4 181 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 XPNPEP3Q9NQH7 507 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 TCP11L1Q9NUJ3 509 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 FBXO40Q9UH90 709 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 PRR12Q9ULL5 1215 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 MTMR7Q9Y216 660 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 NEDD4P46934 1319 aa16.87■□□□□ 0.29
VTI1A-209ENST00000496445 COL6A3P12111 3177 aa16.86■□□□□ 0.29
VTI1A-209ENST00000496445 MYCNP04198 464 aaPredicted RBP16.86■□□□□ 0.29
VTI1A-209ENST00000496445 RARBP10826 455 aa16.86■□□□□ 0.29
VTI1A-209ENST00000496445 AKR1A1P14550 325 aa16.86■□□□□ 0.29
VTI1A-209ENST00000496445 RTP1P59025 263 aa16.86■□□□□ 0.29
VTI1A-209ENST00000496445 IKQ13123 557 aaPredicted RBP16.86■□□□□ 0.29
VTI1A-209ENST00000496445 SNX17Q15036 470 aa16.86■□□□□ 0.29
VTI1A-209ENST00000496445 AKNAD1Q5T1N1 836 aa16.86■□□□□ 0.29
VTI1A-209ENST00000496445 CWC27Q6UX04 472 aaKnown RBP16.86■□□□□ 0.29
VTI1A-209ENST00000496445 ZNF467Q7Z7K2 595 aaPredicted RBP16.86■□□□□ 0.29
VTI1A-209ENST00000496445 ANKRD35Q8N283 1001 aa16.86■□□□□ 0.29
VTI1A-209ENST00000496445 DCAF4Q8WV16 495 aa16.86■□□□□ 0.29
VTI1A-209ENST00000496445 ACAD9Q9H845 621 aa16.86■□□□□ 0.29
VTI1A-209ENST00000496445 RNF146Q9NTX7 359 aa16.86■□□□□ 0.29
VTI1A-209ENST00000496445 CNPY2Q9Y2B0 182 aa16.86■□□□□ 0.29
VTI1A-209ENST00000496445 ADAMTS4O75173 837 aa16.85■□□□□ 0.29
VTI1A-209ENST00000496445 PGK1P00558 417 aa16.85■□□□□ 0.29
VTI1A-209ENST00000496445 MFAP1P55081 439 aaKnown RBP16.85■□□□□ 0.29
VTI1A-209ENST00000496445 IRX6P78412 446 aaPredicted RBP16.85■□□□□ 0.29
VTI1A-209ENST00000496445 CNTN2Q02246 1040 aa16.85■□□□□ 0.29
VTI1A-209ENST00000496445 CCDC96Q2M329 555 aa16.85■□□□□ 0.29
VTI1A-209ENST00000496445 TTBK2Q6IQ55 1244 aa16.85■□□□□ 0.29
VTI1A-209ENST00000496445 CCDC174Q6PII3 467 aa16.85■□□□□ 0.29
VTI1A-209ENST00000496445 SLC39A5Q6ZMH5 540 aa16.85■□□□□ 0.29
VTI1A-209ENST00000496445 IL25Q9H293 177 aa16.85■□□□□ 0.29
VTI1A-209ENST00000496445 DIAPH3Q9NSV4 1193 aa16.85■□□□□ 0.29
VTI1A-209ENST00000496445 ZHX1Q9UKY1 873 aaPredicted RBP16.85■□□□□ 0.29
VTI1A-209ENST00000496445 PHF24Q9UPV7 400 aa16.85■□□□□ 0.29
VTI1A-209ENST00000496445 ADCY6O43306 1168 aa16.84■□□□□ 0.29
VTI1A-209ENST00000496445 TOP1P11387 765 aaKnown RBP16.84■□□□□ 0.29
VTI1A-209ENST00000496445 GSPT1P15170 499 aaKnown RBP16.84■□□□□ 0.29
VTI1A-209ENST00000496445 ADCYAP1R1P41586 468 aa16.84■□□□□ 0.29
VTI1A-209ENST00000496445 MFSD6Q6ZSS7 791 aa16.84■□□□□ 0.29
VTI1A-209ENST00000496445 ARMCX2Q7L311 632 aa16.84■□□□□ 0.29
VTI1A-209ENST00000496445 FAM133AQ8N9E0 248 aa16.84■□□□□ 0.29
VTI1A-209ENST00000496445 FERMT2Q96AC1 680 aa16.84■□□□□ 0.29
VTI1A-209ENST00000496445 LRCH3Q96II8 777 aa16.84■□□□□ 0.29
VTI1A-209ENST00000496445 KATNBL1Q9H079 304 aa16.84■□□□□ 0.29
VTI1A-209ENST00000496445 RANBP17Q9H2T7 1088 aaKnown RBP16.84■□□□□ 0.29
VTI1A-209ENST00000496445 A1CFQ9NQ94 594 aaKnown RBP16.84■□□□□ 0.29
VTI1A-209ENST00000496445 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.84■□□□□ 0.29
VTI1A-209ENST00000496445 ATP11BQ9Y2G3 1177 aa16.84■□□□□ 0.29
VTI1A-209ENST00000496445 ASTN1O14525 1302 aa16.84■□□□□ 0.29
VTI1A-209ENST00000496445 FRMPD2Q68DX3 1309 aaPredicted RBP16.84■□□□□ 0.29
VTI1A-209ENST00000496445 SYNRGQ9UMZ2 1314 aa16.84■□□□□ 0.29
VTI1A-209ENST00000496445 CDH23Q9H251 3354 aa16.84■□□□□ 0.29
VTI1A-209ENST00000496445 PDHBP11177 359 aa16.83■□□□□ 0.28
VTI1A-209ENST00000496445 PCP11498 1178 aaKnown RBP16.83■□□□□ 0.28
VTI1A-209ENST00000496445 SLC16A2P36021 539 aa16.83■□□□□ 0.28
VTI1A-209ENST00000496445 MDM2Q00987 491 aaPredicted RBP16.83■□□□□ 0.28
VTI1A-209ENST00000496445 TKFCQ3LXA3 575 aa16.83■□□□□ 0.28
VTI1A-209ENST00000496445 TRIM60Q495X7 471 aa16.83■□□□□ 0.28
VTI1A-209ENST00000496445 MUM1L1Q5H9M0 696 aa16.83■□□□□ 0.28
VTI1A-209ENST00000496445 BTNL9Q6UXG8 535 aa16.83■□□□□ 0.28
VTI1A-209ENST00000496445 TRERF1Q96PN7 1200 aa16.83■□□□□ 0.28
VTI1A-209ENST00000496445 A0A1W2PQ45 241 aaPredicted RBP16.82■□□□□ 0.28
VTI1A-209ENST00000496445 A0A1W2PQY0 241 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 MYADML2A6NDP7 307 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 SOWAHBA6NEL2 793 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 POTEB2H3BUK9 544 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 HIP1O00291 1037 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 ICAM1P05362 532 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 SNHG28P0DPA3 235 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 ALAS1P13196 640 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 ACVR2BQ13705 512 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 TTC22Q5TAA0 569 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 C1orf53Q5VUE5 145 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 RNF180Q86T96 592 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 CCDC144CPQ8IYA2 1237 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 TDHQ8IZJ6 230 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 UBE2OQ9C0C9 1292 aaKnown RBP16.82■□□□□ 0.28
VTI1A-209ENST00000496445 RNF41Q9H4P4 317 aaPredicted RBP16.82■□□□□ 0.28
VTI1A-209ENST00000496445 FAM184BQ9ULE4 1060 aa16.82■□□□□ 0.28
VTI1A-209ENST00000496445 ZNF213O14771 459 aa16.81■□□□□ 0.28
VTI1A-209ENST00000496445 IRX5P78411 483 aaPredicted RBP16.81■□□□□ 0.28
VTI1A-209ENST00000496445 SYDE2Q5VT97 1194 aa16.81■□□□□ 0.28
VTI1A-209ENST00000496445 CCSAPQ6IQ19 270 aaPredicted RBP16.81■□□□□ 0.28
VTI1A-209ENST00000496445 KLHDC9Q8NEP7 349 aa16.81■□□□□ 0.28
VTI1A-209ENST00000496445 ESR2Q92731 530 aa16.81■□□□□ 0.28
VTI1A-209ENST00000496445 ZKSCAN3Q9BRR0 538 aa16.81■□□□□ 0.28
VTI1A-209ENST00000496445 DSCC1Q9BVC3 393 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms