RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 FERP16591 822 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 NR1D1P20393 614 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 IL6STP40189 918 aaPredicted RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 KRT83P78385 493 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 HLFQ16534 295 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 MCMDC2Q4G0Z9 681 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 ATRIPQ8WXE1 791 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 JAKMIP2Q96AA8 810 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 CYFIP2Q96F07 1278 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 RNPC3Q96LT9 517 aaKnown RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 EPN1Q9Y6I3 576 aaPredicted RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 KRT86O43790 486 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 BUB1BO60566 1050 aaPredicted RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 ECM2O94769 699 aaPredicted RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 TFRCP02786 760 aaKnown RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 GYPCP04921 128 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 HOXB7P09629 217 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 CDC27P30260 824 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 FOSBP53539 338 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 ERVK-24P63145 666 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 CCT2P78371 535 aaKnown RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 FMR1Q06787 632 aaKnown RBP eCLIP10.09□□□□□ -0.79
HPS4-217ENST00000496385 PDIA5Q14554 519 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 POSTNQ15063 836 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 PTPAQ15257 358 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 E2F5Q15329 346 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 PTPN21Q16825 1174 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 LONRF3Q496Y0 759 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 IQCKQ8N0W5 287 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 CCDC24Q8N4L8 307 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 SPDYE1Q8NFV5 336 aaPredicted RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 CAGE1Q8TC20 777 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 PARD3BQ8TEW8 1205 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 ZFAND2BQ8WV99 257 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 DSCC1Q9BVC3 393 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 RABEP2Q9H5N1 569 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 NOD2Q9HC29 1040 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 LRRC10BA6NIK2 292 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 H7C1W4 665 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 TEX33O43247 280 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 SETSIPP0DME0 302 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 GYS1P13807 737 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 SCTRP47872 440 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 HDLBPQ00341 1268 aaKnown RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 LMNB2Q03252 620 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 G3BP1Q13283 466 aaKnown RBP eCLIP10.09□□□□□ -0.79
HPS4-217ENST00000496385 MKRN4PQ13434 485 aaPredicted RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 KIAA0753Q2KHM9 967 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 CDKAL1Q5VV42 579 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 SLC30A9Q6PML9 568 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 LRP10Q7Z4F1 713 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 SPATA20Q8TB22 786 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 NSMCE1Q8WV22 266 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.09□□□□□ -0.79
HPS4-217ENST00000496385 SEC62Q99442 399 aaKnown RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 OSBPL7Q9BZF2 842 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 SLC39A2Q9NP94 309 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 DDX21Q9NR30 783 aaKnown RBP eCLIP10.09□□□□□ -0.79
HPS4-217ENST00000496385 DBF4Q9UBU7 674 aaPredicted RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 PPP1R1BQ9UD71 204 aaPredicted RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 CICQ96RK0 1608 aaPredicted RBP10.08□□□□□ -0.8
HPS4-217ENST00000496385 GMNCA6NCL1 334 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 CFAP73A6NFT4 308 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 ABLIM1O14639 778 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 AP1G2O75843 785 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 SASH1O94885 1247 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 NDUFA10O95299 355 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 RPSAP08865 295 aaKnown RBP10.08□□□□□ -0.8
HPS4-217ENST00000496385 ROR2Q01974 943 aaKnown RBP10.08□□□□□ -0.8
HPS4-217ENST00000496385 SPAG1Q07617 926 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.08□□□□□ -0.8
HPS4-217ENST00000496385 SDCCAG8Q86SQ7 713 aaPredicted RBP10.08□□□□□ -0.8
HPS4-217ENST00000496385 EAF2Q96CJ1 260 aaPredicted RBP10.08□□□□□ -0.8
HPS4-217ENST00000496385 SAMSN1Q9NSI8 373 aaKnown RBP10.08□□□□□ -0.8
HPS4-217ENST00000496385 HAUS2Q9NVX0 235 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 RIPOR2Q9Y4F9 1068 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 FRMD3A2A2Y4 597 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 DNM1LO00429 736 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 PPP1R12BO60237 982 aaPredicted RBP10.08□□□□□ -0.8
HPS4-217ENST00000496385 CAND2O75155 1236 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 ATP1A1P05023 1023 aaKnown RBP10.08□□□□□ -0.8
HPS4-217ENST00000496385 GCLCP48506 637 aaPredicted RBP10.08□□□□□ -0.8
HPS4-217ENST00000496385 ELF3P78545 371 aaPredicted RBP10.08□□□□□ -0.8
HPS4-217ENST00000496385 CFAP58Q5T655 872 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 TEX9Q8N6V9 391 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 SH3TC1Q8TE82 1336 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 CPLX3Q8WVH0 158 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 ATP6V1G3Q96LB4 118 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 GDAP1L1Q96MZ0 367 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 CHCHD3Q9NX63 227 aaKnown RBP10.08□□□□□ -0.8
HPS4-217ENST00000496385 NOP53Q9NZM5 478 aaKnown RBP10.08□□□□□ -0.8
HPS4-217ENST00000496385 GUCA1BQ9UMX6 200 aa10.08□□□□□ -0.8
HPS4-217ENST00000496385 E7EVH7 732 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 CAMTA2O94983 1202 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 FXR1P51114 621 aaKnown RBP eCLIP10.07□□□□□ -0.8
HPS4-217ENST00000496385 VAV2P52735 878 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 CWF19L1Q69YN2 538 aaKnown RBP10.07□□□□□ -0.8
HPS4-217ENST00000496385 STOX1Q6ZVD7 989 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 CACNA2D3Q8IZS8 1091 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 ZBTB10Q96DT7 871 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms