RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 HTATIP2Q9BUP3 242 aa17.01■□□□□ 0.31
PDAP1-204ENST00000496335 FBXO40Q9UH90 709 aa17.01■□□□□ 0.31
PDAP1-204ENST00000496335 DDX20Q9UHI6 824 aaKnown RBP17.01■□□□□ 0.31
PDAP1-204ENST00000496335 DIS3Q9Y2L1 958 aaKnown RBP17.01■□□□□ 0.31
PDAP1-204ENST00000496335 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
PDAP1-204ENST00000496335 TNKSO95271 1327 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 DNAJC25-GNG10A0A024R161 153 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 GOLGA8HP0CJ92 632 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 SNHG28P0DPA3 235 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 ALAS1P13196 640 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 NT5C2P49902 561 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 ZNF543Q08ER8 600 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 CCDC178Q5BJE1 867 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 SYDE2Q5VT97 1194 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 ANO1Q5XXA6 986 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 CYB5R4Q7L1T6 521 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 PNMA1Q8ND90 353 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 ANKS1AQ92625 1134 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 MAP4K1Q92918 833 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 TINF2Q9BSI4 451 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 RNF146Q9NTX7 359 aa17■□□□□ 0.31
PDAP1-204ENST00000496335 H0YGN5 161 aa16.99■□□□□ 0.31
PDAP1-204ENST00000496335 BMP2KLQ5H9B9 411 aa16.99■□□□□ 0.31
PDAP1-204ENST00000496335 MUM1L1Q5H9M0 696 aa16.99■□□□□ 0.31
PDAP1-204ENST00000496335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.99■□□□□ 0.31
PDAP1-204ENST00000496335 TRERF1Q96PN7 1200 aa16.99■□□□□ 0.31
PDAP1-204ENST00000496335 UBAC1Q9BSL1 405 aa16.99■□□□□ 0.31
PDAP1-204ENST00000496335 RANBP17Q9H2T7 1088 aaKnown RBP16.99■□□□□ 0.31
PDAP1-204ENST00000496335 C11orf49Q9H6J7 331 aa16.99■□□□□ 0.31
PDAP1-204ENST00000496335 ACAD9Q9H845 621 aa16.99■□□□□ 0.31
PDAP1-204ENST00000496335 KAT14Q9H8E8 782 aa16.99■□□□□ 0.31
PDAP1-204ENST00000496335 SEPT4O43236 478 aa16.98■□□□□ 0.31
PDAP1-204ENST00000496335 MSCO60682 206 aa16.98■□□□□ 0.31
PDAP1-204ENST00000496335 CNTN2Q02246 1040 aa16.98■□□□□ 0.31
PDAP1-204ENST00000496335 FGD4Q96M96 766 aa16.98■□□□□ 0.31
PDAP1-204ENST00000496335 ESYT1Q9BSJ8 1104 aa16.98■□□□□ 0.31
PDAP1-204ENST00000496335 UBA5Q9GZZ9 404 aa16.98■□□□□ 0.31
PDAP1-204ENST00000496335 CPVLQ9H3G5 476 aa16.98■□□□□ 0.31
PDAP1-204ENST00000496335 A1CFQ9NQ94 594 aaKnown RBP16.98■□□□□ 0.31
PDAP1-204ENST00000496335 CCPG1Q9ULG6 757 aa16.98■□□□□ 0.31
PDAP1-204ENST00000496335 RBM8AQ9Y5S9 174 aaKnown RBP16.98■□□□□ 0.31
PDAP1-204ENST00000496335 PFASO15067 1338 aa16.97■□□□□ 0.31
PDAP1-204ENST00000496335 E7EWF7 191 aa16.97■□□□□ 0.31
PDAP1-204ENST00000496335 SNAI1O95863 264 aaPredicted RBP16.97■□□□□ 0.31
PDAP1-204ENST00000496335 ICAM1P05362 532 aa16.97■□□□□ 0.31
PDAP1-204ENST00000496335 TRDNQ13061 729 aa16.97■□□□□ 0.31
PDAP1-204ENST00000496335 SEC23AQ15436 765 aa16.97■□□□□ 0.31
PDAP1-204ENST00000496335 TKFCQ3LXA3 575 aa16.97■□□□□ 0.31
PDAP1-204ENST00000496335 KIAA1211Q6ZU35 1233 aa16.97■□□□□ 0.31
PDAP1-204ENST00000496335 STOX1Q6ZVD7 989 aa16.97■□□□□ 0.31
PDAP1-204ENST00000496335 LSG1Q9H089 658 aaKnown RBP16.97■□□□□ 0.31
PDAP1-204ENST00000496335 NEFLP07196 543 aa16.96■□□□□ 0.31
PDAP1-204ENST00000496335 GPATCH4Q5T3I0 446 aaKnown RBP16.96■□□□□ 0.31
PDAP1-204ENST00000496335 IFIT1BQ5T764 474 aaKnown RBP16.96■□□□□ 0.31
PDAP1-204ENST00000496335 CHST3Q7LGC8 479 aa16.96■□□□□ 0.31
PDAP1-204ENST00000496335 CNPY2Q9Y2B0 182 aa16.96■□□□□ 0.31
PDAP1-204ENST00000496335 POTEB2H3BUK9 544 aa16.95■□□□□ 0.3
PDAP1-204ENST00000496335 EVI5O60447 810 aa16.95■□□□□ 0.3
PDAP1-204ENST00000496335 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
PDAP1-204ENST00000496335 ZNF865P0CJ78 1059 aaPredicted RBP16.95■□□□□ 0.3
PDAP1-204ENST00000496335 COL6A1P12109 1028 aa16.95■□□□□ 0.3
PDAP1-204ENST00000496335 GJC2Q5T442 439 aaPredicted RBP16.95■□□□□ 0.3
PDAP1-204ENST00000496335 MAMDC4Q6UXC1 1216 aa16.95■□□□□ 0.3
PDAP1-204ENST00000496335 NSMFQ6X4W1 530 aa16.95■□□□□ 0.3
PDAP1-204ENST00000496335 ZNF467Q7Z7K2 595 aaPredicted RBP16.95■□□□□ 0.3
PDAP1-204ENST00000496335 RALYLQ86SE5 291 aaKnown RBP16.95■□□□□ 0.3
PDAP1-204ENST00000496335 FAM133AQ8N9E0 248 aa16.95■□□□□ 0.3
PDAP1-204ENST00000496335 NCOA7Q8NI08 942 aa16.95■□□□□ 0.3
PDAP1-204ENST00000496335 SENP2Q9HC62 589 aa16.95■□□□□ 0.3
PDAP1-204ENST00000496335 NRBP1Q9UHY1 535 aa16.95■□□□□ 0.3
PDAP1-204ENST00000496335 LCTP09848 1927 aa16.95■□□□□ 0.3
PDAP1-204ENST00000496335 MYH6P13533 1939 aa16.95■□□□□ 0.3
PDAP1-204ENST00000496335 SYNGAP1Q96PV0 1343 aa16.95■□□□□ 0.3
PDAP1-204ENST00000496335 DNAH12Q6ZR08 3092 aa16.94■□□□□ 0.3
PDAP1-204ENST00000496335 SOWAHBA6NEL2 793 aa16.94■□□□□ 0.3
PDAP1-204ENST00000496335 IFIT3O14879 490 aaKnown RBP16.94■□□□□ 0.3
PDAP1-204ENST00000496335 MSL3Q8N5Y2 521 aaKnown RBP16.94■□□□□ 0.3
PDAP1-204ENST00000496335 LENG1Q96BZ8 264 aaPredicted RBP16.94■□□□□ 0.3
PDAP1-204ENST00000496335 ANO2Q9NQ90 1003 aa16.94■□□□□ 0.3
PDAP1-204ENST00000496335 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.94■□□□□ 0.3
PDAP1-204ENST00000496335 CYP39A1Q9NYL5 469 aa16.94■□□□□ 0.3
PDAP1-204ENST00000496335 NR2E3Q9Y5X4 410 aa16.94■□□□□ 0.3
PDAP1-204ENST00000496335 DDX49Q9Y6V7 483 aaKnown RBP16.94■□□□□ 0.3
PDAP1-204ENST00000496335 BAZ2BQ9UIF8 2168 aaKnown RBP16.94■□□□□ 0.3
PDAP1-204ENST00000496335 NFIBO00712 420 aa16.93■□□□□ 0.3
PDAP1-204ENST00000496335 PARP1P09874 1014 aaKnown RBP16.93■□□□□ 0.3
PDAP1-204ENST00000496335 ANTXR2P58335 489 aa16.93■□□□□ 0.3
PDAP1-204ENST00000496335 ASPRV1Q53RT3 343 aa16.93■□□□□ 0.3
PDAP1-204ENST00000496335 ARMCX2Q7L311 632 aa16.93■□□□□ 0.3
PDAP1-204ENST00000496335 CCDC144CPQ8IYA2 1237 aa16.93■□□□□ 0.3
PDAP1-204ENST00000496335 C7orf61Q8IZ16 206 aa16.93■□□□□ 0.3
PDAP1-204ENST00000496335 ADGRF4Q8IZF3 695 aa16.93■□□□□ 0.3
PDAP1-204ENST00000496335 ARRDC4Q8NCT1 418 aa16.93■□□□□ 0.3
PDAP1-204ENST00000496335 PURBQ96QR8 312 aaKnown RBP16.93■□□□□ 0.3
PDAP1-204ENST00000496335 SENP6Q9GZR1 1112 aaPredicted RBP16.93■□□□□ 0.3
PDAP1-204ENST00000496335 ZHX1Q9UKY1 873 aaPredicted RBP16.93■□□□□ 0.3
PDAP1-204ENST00000496335 ASTN1O14525 1302 aa16.93■□□□□ 0.3
PDAP1-204ENST00000496335 TRIOBPQ9H2D6 2365 aa16.92■□□□□ 0.3
PDAP1-204ENST00000496335 DNM1LO00429 736 aa16.92■□□□□ 0.3
PDAP1-204ENST00000496335 SLC27A2O14975 620 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms