RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 PALD1Q9ULE6 856 aa11.8□□□□□ -0.52
SMARCAL1-213ENST00000496037 UMODL1Q5DID0 1318 aa11.8□□□□□ -0.52
SMARCAL1-213ENST00000496037 MYADML2A6NDP7 307 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 KIF28PB7ZC32 967 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 DUSP11O75319 330 aaKnown RBP11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 CIAO1O76071 339 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 CD4P01730 458 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 PFKMP08237 780 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 RFX5P48382 616 aaPredicted RBP11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 TAP1Q03518 808 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 KCTD2Q14681 263 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 PUS10Q3MIT2 529 aaKnown RBP11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 PRSS33Q8NF86 280 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 ACER1Q8TDN7 264 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 ANKS1AQ92625 1134 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 SLC9A7Q96T83 725 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 AATFQ9NY61 560 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 LMCD1Q9NZU5 365 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 ZHX1Q9UKY1 873 aaPredicted RBP11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 LHX6Q9UPM6 363 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 DIS3Q9Y2L1 958 aaKnown RBP11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 IL16Q14005 1332 aa11.79□□□□□ -0.52
SMARCAL1-213ENST00000496037 ZNF318Q5VUA4 2279 aa11.78□□□□□ -0.52
SMARCAL1-213ENST00000496037 SLC25A27O95847 323 aa11.78□□□□□ -0.52
SMARCAL1-213ENST00000496037 PGK2P07205 417 aa11.78□□□□□ -0.52
SMARCAL1-213ENST00000496037 ACTN1P12814 892 aa11.78□□□□□ -0.52
SMARCAL1-213ENST00000496037 MVPQ14764 893 aaKnown RBP11.78□□□□□ -0.52
SMARCAL1-213ENST00000496037 E2F4Q16254 413 aa11.78□□□□□ -0.52
SMARCAL1-213ENST00000496037 CCDC27Q2M243 656 aa11.78□□□□□ -0.52
SMARCAL1-213ENST00000496037 ZNF687Q8N1G0 1237 aa11.78□□□□□ -0.52
SMARCAL1-213ENST00000496037 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.78□□□□□ -0.52
SMARCAL1-213ENST00000496037 CABP5Q9NP86 173 aa11.78□□□□□ -0.52
SMARCAL1-213ENST00000496037 SAP30BPQ9UHR5 308 aaKnown RBP11.78□□□□□ -0.52
SMARCAL1-213ENST00000496037 COL4A4P53420 1690 aaPredicted RBP11.78□□□□□ -0.52
SMARCAL1-213ENST00000496037 SMCHD1A6NHR9 2005 aa11.77□□□□□ -0.52
SMARCAL1-213ENST00000496037 A6NJR5 290 aa11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 LPXNO60711 386 aa11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 IL15P40933 162 aaPredicted RBP11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 EXOSC9Q06265 439 aaKnown RBP11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 TTLL4Q14679 1199 aa11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 ABCB5Q2M3G0 1257 aa11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 ZNF792Q3KQV3 632 aa11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 GNASQ5JWF2 1037 aa11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 WWC1Q8IX03 1113 aa11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 GDPD5Q8WTR4 605 aa11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 NOC4LQ9BVI4 516 aaKnown RBP11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 UPF3BQ9BZI7 483 aaKnown RBP11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 WNT8AQ9H1J5 351 aa11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 LRP2BPQ9P2M1 347 aa11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 FAM50BQ9Y247 325 aa11.77□□□□□ -0.53
SMARCAL1-213ENST00000496037 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.76□□□□□ -0.53
SMARCAL1-213ENST00000496037 GRXCR2A6NFK2 248 aa11.76□□□□□ -0.53
SMARCAL1-213ENST00000496037 FLOT1O75955 427 aa11.76□□□□□ -0.53
SMARCAL1-213ENST00000496037 CAMK2BQ13554 666 aa11.76□□□□□ -0.53
SMARCAL1-213ENST00000496037 CERKLQ49MI3 558 aaPredicted RBP11.76□□□□□ -0.53
SMARCAL1-213ENST00000496037 TBC1D9Q6ZT07 1266 aa11.76□□□□□ -0.53
SMARCAL1-213ENST00000496037 MSL3Q8N5Y2 521 aaKnown RBP11.76□□□□□ -0.53
SMARCAL1-213ENST00000496037 PHOSPHO2Q8TCD6 241 aa11.76□□□□□ -0.53
SMARCAL1-213ENST00000496037 SCLYQ96I15 445 aa11.76□□□□□ -0.53
SMARCAL1-213ENST00000496037 TRIOO75962 3097 aa11.76□□□□□ -0.53
SMARCAL1-213ENST00000496037 MYO15AQ9UKN7 3530 aa11.76□□□□□ -0.53
SMARCAL1-213ENST00000496037 ARHGEF15O94989 841 aa11.75□□□□□ -0.53
SMARCAL1-213ENST00000496037 PKN1Q16512 942 aa11.75□□□□□ -0.53
SMARCAL1-213ENST00000496037 NAA16Q6N069 864 aaPredicted RBP11.75□□□□□ -0.53
SMARCAL1-213ENST00000496037 TATDN1Q6P1N9 297 aa11.75□□□□□ -0.53
SMARCAL1-213ENST00000496037 HERC6Q8IVU3 1022 aa11.75□□□□□ -0.53
SMARCAL1-213ENST00000496037 SUGP1Q8IWZ8 645 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-213ENST00000496037 SPATA5Q8NB90 893 aa11.75□□□□□ -0.53
SMARCAL1-213ENST00000496037 ATG4CQ96DT6 458 aa11.75□□□□□ -0.53
SMARCAL1-213ENST00000496037 HMG20BQ9P0W2 317 aa11.75□□□□□ -0.53
SMARCAL1-213ENST00000496037 PRKAG3Q9UGI9 489 aa11.75□□□□□ -0.53
SMARCAL1-213ENST00000496037 SERPINB13Q9UIV8 391 aa11.75□□□□□ -0.53
SMARCAL1-213ENST00000496037 DCHS1Q96JQ0 3298 aa11.75□□□□□ -0.53
SMARCAL1-213ENST00000496037 A0A1B0GUL7 405 aa11.74□□□□□ -0.53
SMARCAL1-213ENST00000496037 CABYRO75952 493 aa11.74□□□□□ -0.53
SMARCAL1-213ENST00000496037 GJA9P57773 515 aa11.74□□□□□ -0.53
SMARCAL1-213ENST00000496037 TIMM10P62072 90 aa11.74□□□□□ -0.53
SMARCAL1-213ENST00000496037 ZP2Q05996 745 aa11.74□□□□□ -0.53
SMARCAL1-213ENST00000496037 PI16Q6UXB8 463 aa11.74□□□□□ -0.53
SMARCAL1-213ENST00000496037 DEFB128Q7Z7B8 93 aa11.74□□□□□ -0.53
SMARCAL1-213ENST00000496037 KRI1Q8N9T8 703 aaKnown RBP11.74□□□□□ -0.53
SMARCAL1-213ENST00000496037 XAGE2Q96GT9 111 aa11.74□□□□□ -0.53
SMARCAL1-213ENST00000496037 SEZ6LQ9BYH1 1024 aa11.74□□□□□ -0.53
SMARCAL1-213ENST00000496037 UPF3AQ9H1J1 476 aaKnown RBP11.74□□□□□ -0.53
SMARCAL1-213ENST00000496037 FAM86C1Q9NVL1 165 aa11.74□□□□□ -0.53
SMARCAL1-213ENST00000496037 TRAK2O60296 914 aa11.73□□□□□ -0.53
SMARCAL1-213ENST00000496037 COPB2P35606 906 aa11.73□□□□□ -0.53
SMARCAL1-213ENST00000496037 TCF15Q12870 199 aa11.73□□□□□ -0.53
SMARCAL1-213ENST00000496037 ITGA7Q13683 1181 aa11.73□□□□□ -0.53
SMARCAL1-213ENST00000496037 TMEM132BQ14DG7 1078 aa11.73□□□□□ -0.53
SMARCAL1-213ENST00000496037 GORABQ5T7V8 394 aa11.73□□□□□ -0.53
SMARCAL1-213ENST00000496037 IRF2BPLQ9H1B7 796 aa11.73□□□□□ -0.53
SMARCAL1-213ENST00000496037 TRPV6Q9H1D0 765 aa11.73□□□□□ -0.53
SMARCAL1-213ENST00000496037 BRWD1Q9NSI6 2320 aa11.73□□□□□ -0.53
SMARCAL1-213ENST00000496037 MTMR7Q9Y216 660 aa11.73□□□□□ -0.53
SMARCAL1-213ENST00000496037 AKAP2Q9Y2D5 859 aa11.73□□□□□ -0.53
SMARCAL1-213ENST00000496037 ZFHX2Q9C0A1 2572 aaPredicted RBP11.73□□□□□ -0.53
SMARCAL1-213ENST00000496037 SPTBN4Q9H254 2564 aa11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 H3BQ06 376 aaPredicted RBP11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 B4GALT4O60513 344 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms