RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 ATL3Q6DD88 541 aa20.12■□□□□ 0.81
PSMB4-206ENST00000495288 C2orf69Q8N8R5 385 aa20.12■□□□□ 0.81
PSMB4-206ENST00000495288 RBM46Q8TBY0 533 aaKnown RBP20.12■□□□□ 0.81
PSMB4-206ENST00000495288 SPATA32Q96LK8 384 aa20.12■□□□□ 0.81
PSMB4-206ENST00000495288 USP28Q96RU2 1077 aa20.12■□□□□ 0.81
PSMB4-206ENST00000495288 SCAND2PQ9GZW5 306 aaPredicted RBP20.12■□□□□ 0.81
PSMB4-206ENST00000495288 GBA2Q9HCG7 927 aaPredicted RBP20.12■□□□□ 0.81
PSMB4-206ENST00000495288 CTDP1Q9Y5B0 961 aaPredicted RBP20.12■□□□□ 0.81
PSMB4-206ENST00000495288 FLOT1O75955 427 aa20.11■□□□□ 0.81
PSMB4-206ENST00000495288 ADCY7P51828 1080 aa20.11■□□□□ 0.81
PSMB4-206ENST00000495288 NPY5RQ15761 445 aa20.11■□□□□ 0.81
PSMB4-206ENST00000495288 USH1GQ495M9 461 aa20.11■□□□□ 0.81
PSMB4-206ENST00000495288 GADL1Q6ZQY3 521 aa20.11■□□□□ 0.81
PSMB4-206ENST00000495288 PRPF38AQ8NAV1 312 aaKnown RBP20.11■□□□□ 0.81
PSMB4-206ENST00000495288 C12orf42Q96LP6 360 aa20.11■□□□□ 0.81
PSMB4-206ENST00000495288 FTOQ9C0B1 505 aaKnown RBP eCLIP20.11■□□□□ 0.81
PSMB4-206ENST00000495288 ZMYND12Q9H0C1 365 aa20.11■□□□□ 0.81
PSMB4-206ENST00000495288 LMBRD1Q9NUN5 540 aa20.11■□□□□ 0.81
PSMB4-206ENST00000495288 SPDYE5A6NIY4 337 aa20.1■□□□□ 0.81
PSMB4-206ENST00000495288 SH3D19Q5HYK7 790 aa20.1■□□□□ 0.81
PSMB4-206ENST00000495288 PPP1R18Q6NYC8 613 aa20.1■□□□□ 0.81
PSMB4-206ENST00000495288 DAGLBQ8NCG7 672 aa20.1■□□□□ 0.81
PSMB4-206ENST00000495288 BICD2Q8TD16 824 aa20.1■□□□□ 0.81
PSMB4-206ENST00000495288 RASGRP4Q8TDF6 673 aa20.1■□□□□ 0.81
PSMB4-206ENST00000495288 LEO1Q8WVC0 666 aaPredicted RBP20.1■□□□□ 0.81
PSMB4-206ENST00000495288 OPTNQ96CV9 577 aa20.1■□□□□ 0.81
PSMB4-206ENST00000495288 RANBP17Q9H2T7 1088 aaKnown RBP20.1■□□□□ 0.81
PSMB4-206ENST00000495288 NOL7Q9UMY1 257 aaKnown RBP20.1■□□□□ 0.81
PSMB4-206ENST00000495288 CLIC4Q9Y696 253 aa20.1■□□□□ 0.81
PSMB4-206ENST00000495288 CCDC194A0A1B0GVG4 234 aa20.09■□□□□ 0.81
PSMB4-206ENST00000495288 ESYT2A0FGR8 921 aa20.09■□□□□ 0.81
PSMB4-206ENST00000495288 FAM205CA6NFA0 338 aa20.09■□□□□ 0.81
PSMB4-206ENST00000495288 CXCL11O14625 94 aa20.09■□□□□ 0.81
PSMB4-206ENST00000495288 ZBED4O75132 1171 aa20.09■□□□□ 0.81
PSMB4-206ENST00000495288 MRPL12P52815 198 aaKnown RBP20.09■□□□□ 0.81
PSMB4-206ENST00000495288 TRAF1Q13077 416 aa20.09■□□□□ 0.81
PSMB4-206ENST00000495288 PPIL2Q13356 520 aa20.09■□□□□ 0.81
PSMB4-206ENST00000495288 STK38Q15208 465 aa20.09■□□□□ 0.81
PSMB4-206ENST00000495288 NOM1Q5C9Z4 860 aaKnown RBP20.09■□□□□ 0.81
PSMB4-206ENST00000495288 EARS2Q5JPH6 523 aaKnown RBP20.09■□□□□ 0.81
PSMB4-206ENST00000495288 ANO1Q5XXA6 986 aa20.09■□□□□ 0.81
PSMB4-206ENST00000495288 PIK3AP1Q6ZUJ8 805 aa20.09■□□□□ 0.81
PSMB4-206ENST00000495288 GPBP1L1Q9HC44 474 aaPredicted RBP20.09■□□□□ 0.81
PSMB4-206ENST00000495288 RTEL1Q9NZ71 1219 aa20.09■□□□□ 0.81
PSMB4-206ENST00000495288 BIN2Q9UBW5 565 aaPredicted RBP20.09■□□□□ 0.81
PSMB4-206ENST00000495288 PCDHA6Q9UN73 950 aa20.09■□□□□ 0.81
PSMB4-206ENST00000495288 PCDHA8Q9Y5H6 950 aa20.09■□□□□ 0.81
PSMB4-206ENST00000495288 USP17L15C9J2P7 530 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 USP17L13C9JLJ4 530 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 USP17L11C9JVI0 530 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 USP17L18D6R9N7 530 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 USP17L22D6RA61 530 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 USP17L17D6RBQ6 530 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 USP17L19D6RCP7 530 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 USP17L20D6RJB6 530 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 IRF6O14896 467 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 GADD45BO75293 160 aaPredicted RBP20.08■□□□□ 0.81
PSMB4-206ENST00000495288 FKBP1BP68106 108 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 USP17L24Q0WX57 530 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 SF3A1Q15459 793 aaKnown RBP20.08■□□□□ 0.81
PSMB4-206ENST00000495288 JAKMIP3Q5VZ66 844 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 CUL5Q93034 780 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 TNFRSF25Q93038 417 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 PSTPIP2Q9H939 334 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 RIC8AQ9NPQ8 531 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 RCOR1Q9UKL0 485 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 PPP1R9AQ9ULJ8 1098 aa20.08■□□□□ 0.81
PSMB4-206ENST00000495288 TRAK2O60296 914 aa20.07■□□□□ 0.8
PSMB4-206ENST00000495288 ITGBL1O95965 494 aaPredicted RBP20.07■□□□□ 0.8
PSMB4-206ENST00000495288 TAL1P17542 331 aaPredicted RBP20.07■□□□□ 0.8
PSMB4-206ENST00000495288 TOB1P50616 345 aaPredicted RBP20.07■□□□□ 0.8
PSMB4-206ENST00000495288 RILPL1Q5EBL4 403 aa20.07■□□□□ 0.8
PSMB4-206ENST00000495288 CATSPERGQ6ZRH7 1159 aa20.07■□□□□ 0.8
PSMB4-206ENST00000495288 CPXCR1Q8N123 301 aa20.07■□□□□ 0.8
PSMB4-206ENST00000495288 REXO1Q8N1G1 1221 aaKnown RBP20.07■□□□□ 0.8
PSMB4-206ENST00000495288 TMEM87AQ8NBN3 555 aa20.07■□□□□ 0.8
PSMB4-206ENST00000495288 TMEM260Q9NX78 707 aa20.07■□□□□ 0.8
PSMB4-206ENST00000495288 UTRNP46939 3433 aa20.07■□□□□ 0.8
PSMB4-206ENST00000495288 UNCXA6NJT0 531 aa20.06■□□□□ 0.8
PSMB4-206ENST00000495288 COG2Q14746 738 aa20.06■□□□□ 0.8
PSMB4-206ENST00000495288 UBE2SQ16763 222 aa20.06■□□□□ 0.8
PSMB4-206ENST00000495288 KRT25Q7Z3Z0 450 aa20.06■□□□□ 0.8
PSMB4-206ENST00000495288 GLT8D2Q9H1C3 349 aa20.06■□□□□ 0.8
PSMB4-206ENST00000495288 PHIPQ8WWQ0 1821 aa20.05■□□□□ 0.8
PSMB4-206ENST00000495288 A0A0G2JLL6 359 aaPredicted RBP20.05■□□□□ 0.8
PSMB4-206ENST00000495288 GOLGA6L4A6NEF3 574 aa20.05■□□□□ 0.8
PSMB4-206ENST00000495288 DSG3P32926 999 aa20.05■□□□□ 0.8
PSMB4-206ENST00000495288 SKOR2Q2VWA4 1001 aaPredicted RBP20.05■□□□□ 0.8
PSMB4-206ENST00000495288 TREML2Q5T2D2 321 aa20.05■□□□□ 0.8
PSMB4-206ENST00000495288 PRRT2Q7Z6L0 340 aaPredicted RBP20.05■□□□□ 0.8
PSMB4-206ENST00000495288 ATG4CQ96DT6 458 aa20.05■□□□□ 0.8
PSMB4-206ENST00000495288 AGBL1Q96MI9 1066 aa20.05■□□□□ 0.8
PSMB4-206ENST00000495288 RAVER2Q9HCJ3 691 aaKnown RBP20.05■□□□□ 0.8
PSMB4-206ENST00000495288 POLR3EQ9NVU0 708 aa20.05■□□□□ 0.8
PSMB4-206ENST00000495288 HOXC10Q9NYD6 342 aa20.05■□□□□ 0.8
PSMB4-206ENST00000495288 CCPG1Q9ULG6 757 aa20.05■□□□□ 0.8
PSMB4-206ENST00000495288 MRPL11Q9Y3B7 192 aaKnown RBP20.05■□□□□ 0.8
PSMB4-206ENST00000495288 DDX49Q9Y6V7 483 aaKnown RBP20.05■□□□□ 0.8
PSMB4-206ENST00000495288 OTOFQ9HC10 1997 aa20.04■□□□□ 0.8
PSMB4-206ENST00000495288 M0R2N6 131 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms