RNA–Protein interactions for RNA: ENST00000495175.6

TRIT1-213, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best)

Gene TRIT1, Length 1,156 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-213ENST00000495175 FDX1P10109 184 aa12.97□□□□□ -0.33
TRIT1-213ENST00000495175 ADD1P35611 737 aaKnown RBP12.97□□□□□ -0.33
TRIT1-213ENST00000495175 OAZ1P54368 228 aa12.97□□□□□ -0.33
TRIT1-213ENST00000495175 LACTBP83111 547 aaPredicted RBP12.97□□□□□ -0.33
TRIT1-213ENST00000495175 ME3Q16798 604 aa12.97□□□□□ -0.33
TRIT1-213ENST00000495175 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.97□□□□□ -0.33
TRIT1-213ENST00000495175 RIOX2Q8IUF8 465 aa12.97□□□□□ -0.33
TRIT1-213ENST00000495175 CMTR1Q8N1G2 835 aaKnown RBP12.97□□□□□ -0.33
TRIT1-213ENST00000495175 GPRC5AQ8NFJ5 357 aa12.97□□□□□ -0.33
TRIT1-213ENST00000495175 PAGR1Q9BTK6 254 aa12.97□□□□□ -0.33
TRIT1-213ENST00000495175 SPATC1LQ9H0A9 340 aa12.97□□□□□ -0.33
TRIT1-213ENST00000495175 MYH6P13533 1939 aa12.97□□□□□ -0.33
TRIT1-213ENST00000495175 GOLGA8AA7E2F4 631 aa12.96□□□□□ -0.33
TRIT1-213ENST00000495175 PFKFB2O60825 505 aa12.96□□□□□ -0.33
TRIT1-213ENST00000495175 KIF5BP33176 963 aa12.96□□□□□ -0.33
TRIT1-213ENST00000495175 METAP2P50579 478 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRIT1-213ENST00000495175 SP3Q02447 781 aa12.96□□□□□ -0.33
TRIT1-213ENST00000495175 SCRN1Q12765 414 aa12.96□□□□□ -0.33
TRIT1-213ENST00000495175 RTN1Q16799 776 aa12.96□□□□□ -0.33
TRIT1-213ENST00000495175 QRICH1Q2TAL8 776 aa12.96□□□□□ -0.33
TRIT1-213ENST00000495175 SHCBP1Q8NEM2 672 aa12.96□□□□□ -0.33
TRIT1-213ENST00000495175 CTCFLQ8NI51 663 aaPredicted RBP12.96□□□□□ -0.33
TRIT1-213ENST00000495175 TRIM47Q96LD4 638 aa12.96□□□□□ -0.33
TRIT1-213ENST00000495175 AGBL1Q96MI9 1066 aa12.96□□□□□ -0.33
TRIT1-213ENST00000495175 BEGAINQ9BUH8 593 aa12.96□□□□□ -0.33
TRIT1-213ENST00000495175 NCOA5Q9HCD5 579 aaKnown RBP12.96□□□□□ -0.33
TRIT1-213ENST00000495175 RAVER2Q9HCJ3 691 aaKnown RBP12.96□□□□□ -0.33
TRIT1-213ENST00000495175 RBM28Q9NW13 759 aaKnown RBP12.96□□□□□ -0.33
TRIT1-213ENST00000495175 RBBP6Q7Z6E9 1792 aaKnown RBP12.96□□□□□ -0.34
TRIT1-213ENST00000495175 FKTNO75072 461 aa12.95□□□□□ -0.34
TRIT1-213ENST00000495175 CTDNEP1O95476 244 aa12.95□□□□□ -0.34
TRIT1-213ENST00000495175 ICAM1P05362 532 aa12.95□□□□□ -0.34
TRIT1-213ENST00000495175 CTCFP49711 727 aaPredicted RBP12.95□□□□□ -0.34
TRIT1-213ENST00000495175 LBX1P52954 281 aa12.95□□□□□ -0.34
TRIT1-213ENST00000495175 FGD1P98174 961 aa12.95□□□□□ -0.34
TRIT1-213ENST00000495175 PPP2R5BQ15173 497 aa12.95□□□□□ -0.34
TRIT1-213ENST00000495175 ANKRD1Q15327 319 aa12.95□□□□□ -0.34
TRIT1-213ENST00000495175 CDC37Q16543 378 aaPredicted RBP12.95□□□□□ -0.34
TRIT1-213ENST00000495175 IL27Q8NEV9 243 aa12.95□□□□□ -0.34
TRIT1-213ENST00000495175 CD99L2Q8TCZ2 262 aa12.95□□□□□ -0.34
TRIT1-213ENST00000495175 PIGSQ96S52 555 aa12.95□□□□□ -0.34
TRIT1-213ENST00000495175 LZTS2Q9BRK4 669 aa12.95□□□□□ -0.34
TRIT1-213ENST00000495175 TEX13BQ9BXU2 312 aa12.95□□□□□ -0.34
TRIT1-213ENST00000495175 EFCC1Q9HA90 598 aa12.95□□□□□ -0.34
TRIT1-213ENST00000495175 OPLAHO14841 1288 aa12.94□□□□□ -0.34
TRIT1-213ENST00000495175 ZBTB5O15062 677 aa12.94□□□□□ -0.34
TRIT1-213ENST00000495175 ZBED4O75132 1171 aa12.94□□□□□ -0.34
TRIT1-213ENST00000495175 STAT3P40763 770 aa12.94□□□□□ -0.34
TRIT1-213ENST00000495175 GNAQP50148 359 aa12.94□□□□□ -0.34
TRIT1-213ENST00000495175 CCT2P78371 535 aaKnown RBP12.94□□□□□ -0.34
TRIT1-213ENST00000495175 IKQ13123 557 aaPredicted RBP12.94□□□□□ -0.34
TRIT1-213ENST00000495175 SNRNP48Q6IEG0 339 aaKnown RBP12.94□□□□□ -0.34
TRIT1-213ENST00000495175 CCDC174Q6PII3 467 aa12.94□□□□□ -0.34
TRIT1-213ENST00000495175 SYNE3Q6ZMZ3 975 aa12.94□□□□□ -0.34
TRIT1-213ENST00000495175 CLEC4DQ8WXI8 215 aa12.94□□□□□ -0.34
TRIT1-213ENST00000495175 USP6NLQ92738 828 aa12.94□□□□□ -0.34
TRIT1-213ENST00000495175 GTF3C6Q969F1 213 aa12.94□□□□□ -0.34
TRIT1-213ENST00000495175 SHISA4Q96DD7 197 aa12.94□□□□□ -0.34
TRIT1-213ENST00000495175 GJD2Q9UKL4 321 aa12.94□□□□□ -0.34
TRIT1-213ENST00000495175 ISY1Q9ULR0 285 aaKnown RBP12.94□□□□□ -0.34
TRIT1-213ENST00000495175 IGHA2P01877 340 aa12.93□□□□□ -0.34
TRIT1-213ENST00000495175 IFNAR1P17181 557 aa12.93□□□□□ -0.34
TRIT1-213ENST00000495175 ERCC3P19447 782 aa12.93□□□□□ -0.34
TRIT1-213ENST00000495175 PKN1Q16512 942 aa12.93□□□□□ -0.34
TRIT1-213ENST00000495175 MUM1L1Q5H9M0 696 aa12.93□□□□□ -0.34
TRIT1-213ENST00000495175 MORN1Q5T089 497 aa12.93□□□□□ -0.34
TRIT1-213ENST00000495175 NOL8Q76FK4 1167 aaKnown RBP12.93□□□□□ -0.34
TRIT1-213ENST00000495175 GPR142Q7Z601 462 aa12.93□□□□□ -0.34
TRIT1-213ENST00000495175 CPXCR1Q8N123 301 aa12.93□□□□□ -0.34
TRIT1-213ENST00000495175 VAT1LQ9HCJ6 419 aa12.93□□□□□ -0.34
TRIT1-213ENST00000495175 LIMCH1Q9UPQ0 1083 aa12.93□□□□□ -0.34
TRIT1-213ENST00000495175 ZNFX1Q9P2E3 1918 aaKnown RBP12.93□□□□□ -0.34
TRIT1-213ENST00000495175 PNMA6FA0A0J9YX94 578 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 hCG_1642624A0A1W2PR95 340 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 CAPN15O75808 1086 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 SLC25A27O95847 323 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 MAPK4P31152 587 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 PSMC4P43686 418 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 GHRHRQ02643 423 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 STK3Q13188 491 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 GRB14Q14449 540 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 TYW1BQ6NUM6 668 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 NECAB1Q8N987 351 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 MROH8Q9H579 483 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 PRDM10Q9NQV6 1147 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 CCPG1Q9ULG6 757 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 CENPFP49454 3210 aa12.92□□□□□ -0.34
TRIT1-213ENST00000495175 LRRC37A2A6NM11 1700 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 DNAJC25-GNG10A0A024R161 153 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 CCDC196A0A1B0GTZ2 297 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 NFIBO00712 420 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 PRPF3O43395 683 aaKnown RBP12.91□□□□□ -0.34
TRIT1-213ENST00000495175 DTNBO60941 627 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 FDPSP14324 419 aaKnown RBP12.91□□□□□ -0.34
TRIT1-213ENST00000495175 PTPREP23469 700 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 CCNA1P78396 465 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 PLS1Q14651 629 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 TKFCQ3LXA3 575 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 OTOP1Q7RTM1 612 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms