RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 CCDC174Q6PII3 467 aa18.37■□□□□ 0.53
LIMS2-216ENST00000494613 DGKHQ86XP1 1220 aa18.37■□□□□ 0.53
LIMS2-216ENST00000494613 MSL3Q8N5Y2 521 aaKnown RBP18.37■□□□□ 0.53
LIMS2-216ENST00000494613 TRERF1Q96PN7 1200 aa18.37■□□□□ 0.53
LIMS2-216ENST00000494613 ZSWIM5Q9P217 1185 aa18.37■□□□□ 0.53
LIMS2-216ENST00000494613 ZNF236Q9UL36 1845 aa18.37■□□□□ 0.53
LIMS2-216ENST00000494613 CEP290O15078 2479 aa18.37■□□□□ 0.53
LIMS2-216ENST00000494613 DNM1LO00429 736 aa18.36■□□□□ 0.53
LIMS2-216ENST00000494613 KDM4AO75164 1064 aa18.36■□□□□ 0.53
LIMS2-216ENST00000494613 ALAS1P13196 640 aa18.36■□□□□ 0.53
LIMS2-216ENST00000494613 NEDD4P46934 1319 aa18.36■□□□□ 0.53
LIMS2-216ENST00000494613 CNTN2Q02246 1040 aa18.36■□□□□ 0.53
LIMS2-216ENST00000494613 TKFCQ3LXA3 575 aa18.36■□□□□ 0.53
LIMS2-216ENST00000494613 FRMPD2Q68DX3 1309 aaPredicted RBP18.36■□□□□ 0.53
LIMS2-216ENST00000494613 ZNF467Q7Z7K2 595 aaPredicted RBP18.36■□□□□ 0.53
LIMS2-216ENST00000494613 PRO3102Q9H379 93 aa18.36■□□□□ 0.53
LIMS2-216ENST00000494613 ZMYND8Q9ULU4 1186 aaPredicted RBP18.36■□□□□ 0.53
LIMS2-216ENST00000494613 CNPY2Q9Y2B0 182 aa18.36■□□□□ 0.53
LIMS2-216ENST00000494613 B4E1Z4 1266 aa18.35■□□□□ 0.53
LIMS2-216ENST00000494613 MYCNP04198 464 aaPredicted RBP18.35■□□□□ 0.53
LIMS2-216ENST00000494613 PDHBP11177 359 aa18.35■□□□□ 0.53
LIMS2-216ENST00000494613 LRRC41Q15345 812 aa18.35■□□□□ 0.53
LIMS2-216ENST00000494613 CCDC178Q5BJE1 867 aa18.35■□□□□ 0.53
LIMS2-216ENST00000494613 RUFY2Q8WXA3 655 aa18.35■□□□□ 0.53
LIMS2-216ENST00000494613 ANKS1AQ92625 1134 aa18.35■□□□□ 0.53
LIMS2-216ENST00000494613 FGD4Q96M96 766 aa18.35■□□□□ 0.53
LIMS2-216ENST00000494613 ACAD9Q9H845 621 aa18.35■□□□□ 0.53
LIMS2-216ENST00000494613 RNF146Q9NTX7 359 aa18.35■□□□□ 0.53
LIMS2-216ENST00000494613 SMCHD1A6NHR9 2005 aa18.35■□□□□ 0.53
LIMS2-216ENST00000494613 SYNGAP1Q96PV0 1343 aa18.34■□□□□ 0.53
LIMS2-216ENST00000494613 POTEB2H3BUK9 544 aa18.34■□□□□ 0.53
LIMS2-216ENST00000494613 RARBP10826 455 aa18.34■□□□□ 0.53
LIMS2-216ENST00000494613 SYN1P17600 705 aa18.34■□□□□ 0.53
LIMS2-216ENST00000494613 NT5C2P49902 561 aa18.34■□□□□ 0.53
LIMS2-216ENST00000494613 ATN1P54259 1190 aaPredicted RBP18.34■□□□□ 0.53
LIMS2-216ENST00000494613 PTH1RQ03431 593 aa18.34■□□□□ 0.53
LIMS2-216ENST00000494613 MUM1L1Q5H9M0 696 aa18.34■□□□□ 0.53
LIMS2-216ENST00000494613 SYDE2Q5VT97 1194 aa18.34■□□□□ 0.53
LIMS2-216ENST00000494613 IQCA1Q86XH1 822 aa18.34■□□□□ 0.53
LIMS2-216ENST00000494613 RANBP17Q9H2T7 1088 aaKnown RBP18.34■□□□□ 0.53
LIMS2-216ENST00000494613 FAM184BQ9ULE4 1060 aa18.34■□□□□ 0.53
LIMS2-216ENST00000494613 KBTBD13C9JR72 458 aa18.33■□□□□ 0.52
LIMS2-216ENST00000494613 PGK1P00558 417 aa18.33■□□□□ 0.52
LIMS2-216ENST00000494613 ICAM1P05362 532 aa18.33■□□□□ 0.52
LIMS2-216ENST00000494613 SNHG28P0DPA3 235 aa18.33■□□□□ 0.52
LIMS2-216ENST00000494613 ADCYAP1R1P41586 468 aa18.33■□□□□ 0.52
LIMS2-216ENST00000494613 ZNF543Q08ER8 600 aa18.33■□□□□ 0.52
LIMS2-216ENST00000494613 ACVR2BQ13705 512 aa18.33■□□□□ 0.52
LIMS2-216ENST00000494613 SLC39A5Q6ZMH5 540 aa18.33■□□□□ 0.52
LIMS2-216ENST00000494613 FAM133AQ8N9E0 248 aa18.33■□□□□ 0.52
LIMS2-216ENST00000494613 ZSCAN10Q96SZ4 725 aaPredicted RBP18.33■□□□□ 0.52
LIMS2-216ENST00000494613 KRT23Q9C075 422 aa18.33■□□□□ 0.52
LIMS2-216ENST00000494613 A1CFQ9NQ94 594 aaKnown RBP18.33■□□□□ 0.52
LIMS2-216ENST00000494613 XPNPEP3Q9NQH7 507 aa18.33■□□□□ 0.52
LIMS2-216ENST00000494613 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.33■□□□□ 0.52
LIMS2-216ENST00000494613 CCPG1Q9ULG6 757 aa18.33■□□□□ 0.52
LIMS2-216ENST00000494613 SOWAHBA6NEL2 793 aa18.32■□□□□ 0.52
LIMS2-216ENST00000494613 AKR1A1P14550 325 aa18.32■□□□□ 0.52
LIMS2-216ENST00000494613 FXR1P51114 621 aaKnown RBP eCLIP18.32■□□□□ 0.52
LIMS2-216ENST00000494613 CCDC144CPQ8IYA2 1237 aa18.32■□□□□ 0.52
LIMS2-216ENST00000494613 FERMT2Q96AC1 680 aa18.32■□□□□ 0.52
LIMS2-216ENST00000494613 GDF15Q99988 308 aa18.32■□□□□ 0.52
LIMS2-216ENST00000494613 ABHD16BQ9H3Z7 469 aa18.32■□□□□ 0.52
LIMS2-216ENST00000494613 GOLGA8HP0CJ92 632 aa18.31■□□□□ 0.52
LIMS2-216ENST00000494613 ARMCX2Q7L311 632 aa18.31■□□□□ 0.52
LIMS2-216ENST00000494613 PNMA1Q8ND90 353 aa18.31■□□□□ 0.52
LIMS2-216ENST00000494613 UBA5Q9GZZ9 404 aa18.31■□□□□ 0.52
LIMS2-216ENST00000494613 KAT14Q9H8E8 782 aa18.31■□□□□ 0.52
LIMS2-216ENST00000494613 CNNM2Q9H8M5 875 aa18.31■□□□□ 0.52
LIMS2-216ENST00000494613 CYP39A1Q9NYL5 469 aa18.31■□□□□ 0.52
LIMS2-216ENST00000494613 SGSM2O43147 1006 aa18.3■□□□□ 0.52
LIMS2-216ENST00000494613 BMP8BP34820 402 aa18.3■□□□□ 0.52
LIMS2-216ENST00000494613 CCDC144BQ3MJ40 725 aa18.3■□□□□ 0.52
LIMS2-216ENST00000494613 GPATCH4Q5T3I0 446 aaKnown RBP18.3■□□□□ 0.52
LIMS2-216ENST00000494613 RNF180Q86T96 592 aa18.3■□□□□ 0.52
LIMS2-216ENST00000494613 ENAHQ8N8S7 591 aaPredicted RBP18.3■□□□□ 0.52
LIMS2-216ENST00000494613 ZHX1Q9UKY1 873 aaPredicted RBP18.3■□□□□ 0.52
LIMS2-216ENST00000494613 ALPK3Q96L96 1907 aa18.29■□□□□ 0.52
LIMS2-216ENST00000494613 DNAH12Q6ZR08 3092 aa18.29■□□□□ 0.52
LIMS2-216ENST00000494613 RAD50Q92878 1312 aa18.29■□□□□ 0.52
LIMS2-216ENST00000494613 PLXNA1Q9UIW2 1896 aa18.29■□□□□ 0.52
LIMS2-216ENST00000494613 ASB14A6NK59 587 aa18.29■□□□□ 0.52
LIMS2-216ENST00000494613 DUSP11O75319 330 aaKnown RBP18.29■□□□□ 0.52
LIMS2-216ENST00000494613 BAATQ14032 418 aaPredicted RBP18.29■□□□□ 0.52
LIMS2-216ENST00000494613 NSMFQ6X4W1 530 aa18.29■□□□□ 0.52
LIMS2-216ENST00000494613 CYB5R4Q7L1T6 521 aa18.29■□□□□ 0.52
LIMS2-216ENST00000494613 LENG1Q96BZ8 264 aaPredicted RBP18.29■□□□□ 0.52
LIMS2-216ENST00000494613 PURBQ96QR8 312 aaKnown RBP18.29■□□□□ 0.52
LIMS2-216ENST00000494613 CPVLQ9H3G5 476 aa18.29■□□□□ 0.52
LIMS2-216ENST00000494613 PCDH10Q9P2E7 1040 aa18.29■□□□□ 0.52
LIMS2-216ENST00000494613 PHF24Q9UPV7 400 aa18.29■□□□□ 0.52
LIMS2-216ENST00000494613 U3KPZ7 1027 aaPredicted RBP18.29■□□□□ 0.52
LIMS2-216ENST00000494613 CYP21A2P08686 494 aa18.28■□□□□ 0.52
LIMS2-216ENST00000494613 MAGEA10P43363 369 aaPredicted RBP18.28■□□□□ 0.52
LIMS2-216ENST00000494613 RTP1P59025 263 aa18.28■□□□□ 0.52
LIMS2-216ENST00000494613 KLHDC9Q8NEP7 349 aa18.28■□□□□ 0.52
LIMS2-216ENST00000494613 CLEC4DQ8WXI8 215 aa18.28■□□□□ 0.52
LIMS2-216ENST00000494613 MAP4K1Q92918 833 aa18.28■□□□□ 0.52
LIMS2-216ENST00000494613 TSEN34Q9BSV6 310 aaKnown RBP18.28■□□□□ 0.52
LIMS2-216ENST00000494613 KATNBL1Q9H079 304 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms