RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 AGTPBP1Q9UPW5 1226 aa13.14□□□□□ -0.31
MCF2L-231ENST00000494043 TLL2Q9Y6L7 1015 aa13.14□□□□□ -0.31
MCF2L-231ENST00000494043 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 TMEM88BA6NKF7 163 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 FDX1P10109 184 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 CETPP11597 493 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 CALML3P27482 149 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 HOXA7P31268 230 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-231ENST00000494043 DSG3P32926 999 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 GTF2A2P52657 109 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 NAPAP54920 295 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 KIF23Q02241 960 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-231ENST00000494043 RESTQ13127 1097 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 SAFBQ15424 915 aaKnown RBP eCLIP13.13□□□□□ -0.31
MCF2L-231ENST00000494043 MCTP1Q6DN14 999 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 FERMT3Q86UX7 667 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 FBXO11Q86XK2 927 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 RASAL3Q86YV0 1011 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 AMNQ9BXJ7 453 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 SLC38A10Q9HBR0 1119 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 PARP14Q460N5 1801 aa13.13□□□□□ -0.31
MCF2L-231ENST00000494043 ESYT2A0FGR8 921 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 VWA5AO00534 786 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 ZNF157P51786 506 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-231ENST00000494043 NLRP5P59047 1200 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 MKRN3Q13064 507 aaKnown RBP13.12□□□□□ -0.31
MCF2L-231ENST00000494043 TRAF1Q13077 416 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 COG2Q14746 738 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 NPY5RQ15761 445 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 GPAT2Q6NUI2 795 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 RGMBQ6NW40 437 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 CCDC174Q6PII3 467 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 DIS3L2Q8IYB7 885 aaKnown RBP13.12□□□□□ -0.31
MCF2L-231ENST00000494043 TNPO1Q92973 898 aaKnown RBP13.12□□□□□ -0.31
MCF2L-231ENST00000494043 COA7Q96BR5 231 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 ATG4CQ96DT6 458 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 MS4A4AQ96JQ5 239 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 ZMYND12Q9H0C1 365 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 ZSCAN16Q9H4T2 348 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-231ENST00000494043 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 PCDHA1Q9Y5I3 950 aa13.12□□□□□ -0.31
MCF2L-231ENST00000494043 RLFQ13129 1914 aa13.11□□□□□ -0.31
MCF2L-231ENST00000494043 CCL15-CCL14A0A0B4J2E2 113 aa13.11□□□□□ -0.31
MCF2L-231ENST00000494043 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-231ENST00000494043 KIF28PB7ZC32 967 aa13.11□□□□□ -0.31
MCF2L-231ENST00000494043 ZBED4O75132 1171 aa13.11□□□□□ -0.31
MCF2L-231ENST00000494043 U2AF2P26368 475 aaKnown RBP eCLIP13.11□□□□□ -0.31
MCF2L-231ENST00000494043 KRT2P35908 639 aa13.11□□□□□ -0.31
MCF2L-231ENST00000494043 PABPC4Q13310 644 aaKnown RBP eCLIP13.11□□□□□ -0.31
MCF2L-231ENST00000494043 CCL15Q16663 113 aa13.11□□□□□ -0.31
MCF2L-231ENST00000494043 GALNT17Q6IS24 598 aa13.11□□□□□ -0.31
MCF2L-231ENST00000494043 DAGLBQ8NCG7 672 aa13.11□□□□□ -0.31
MCF2L-231ENST00000494043 BRI3BPQ8WY22 251 aa13.11□□□□□ -0.31
MCF2L-231ENST00000494043 FOXP1Q9H334 677 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-231ENST00000494043 HOXC10Q9NYD6 342 aa13.11□□□□□ -0.31
MCF2L-231ENST00000494043 ABT1Q9ULW3 272 aaKnown RBP13.11□□□□□ -0.31
MCF2L-231ENST00000494043 PCDHA4Q9UN74 947 aa13.11□□□□□ -0.31
MCF2L-231ENST00000494043 ADAMTS5Q9UNA0 930 aa13.11□□□□□ -0.31
MCF2L-231ENST00000494043 ZNF536O15090 1300 aa13.11□□□□□ -0.31
MCF2L-231ENST00000494043 SMCO2A6NFE2 343 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 BTBD18B2RXH4 712 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 ICAM1P05362 532 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 SLC10A3P09131 477 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 ADCY7P51828 1080 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-231ENST00000494043 GNL2Q13823 731 aaKnown RBP13.1□□□□□ -0.31
MCF2L-231ENST00000494043 USH1GQ495M9 461 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 BRAPQ7Z569 592 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 REPS2Q8NFH8 660 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 OXER1Q8TDS5 423 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 HHIPL1Q96JK4 782 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 ASCC2Q9H1I8 757 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-231ENST00000494043 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 PNMA2Q9UL42 364 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 SLC45A1Q9Y2W3 748 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 CTDP1Q9Y5B0 961 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-231ENST00000494043 ATP6V1DQ9Y5K8 247 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 A0A0G2JMZ2 1700 aa13.1□□□□□ -0.31
MCF2L-231ENST00000494043 BTBD19C9JJ37 291 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 ADAMTS3O15072 1205 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 TAL1P17542 331 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-231ENST00000494043 OSBPP22059 807 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 GNA11P29992 359 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 OAZ1P54368 228 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 NR5A1Q13285 461 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 LBX2Q6XYB7 198 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 CLEC17AQ6ZS10 378 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 ANKRD23Q86SG2 305 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 NOSTRINQ8IVI9 506 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 BICD2Q8TD16 824 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 TNFRSF25Q93038 417 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 AGBL1Q96MI9 1066 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 GLT8D2Q9H1C3 349 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 RAVER2Q9HCJ3 691 aaKnown RBP13.09□□□□□ -0.31
MCF2L-231ENST00000494043 RIC8AQ9NPQ8 531 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 CCPG1Q9ULG6 757 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 ABCB11O95342 1321 aa13.09□□□□□ -0.31
MCF2L-231ENST00000494043 TESPA1A2RU30 521 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-231ENST00000494043 FAM155AB1AL88 458 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms