RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 ALX1Q15699 326 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 NEK8Q86SG6 692 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 CCDC42Q96M95 316 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 CSRNP1Q96S65 589 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 ALDH8A1Q9H2A2 487 aaPredicted RBP12.33□□□□□ -0.44
COL2A1-208ENST00000493991 SPTLC3Q9NUV7 552 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 SRPRBQ9Y5M8 271 aaKnown RBP12.33□□□□□ -0.44
COL2A1-208ENST00000493991 TCRBV5S4A2TA0A5A2 114 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 FOXP2O15409 715 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 RPN1P04843 607 aaKnown RBP12.33□□□□□ -0.44
COL2A1-208ENST00000493991 HNRNPH2P55795 449 aaKnown RBP12.33□□□□□ -0.44
COL2A1-208ENST00000493991 PRPF4BQ13523 1007 aaKnown RBP12.33□□□□□ -0.44
COL2A1-208ENST00000493991 RESP18Q5W5W9 173 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 SLFN13Q68D06 897 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 NSMFQ6X4W1 530 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 JDP2Q8WYK2 163 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 CTAGE1Q96RT6 745 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 IRX2Q9BZI1 471 aaPredicted RBP12.33□□□□□ -0.44
COL2A1-208ENST00000493991 SOWAHDA6NJG2 315 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 TMCO5BA8MYB1 307 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 OR52Z1P0C646 297 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 SLFN14P0C7P3 912 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 CLCN6P51797 869 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 MORC3Q14149 939 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 TERF2Q15554 542 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 CCDC122Q5T0U0 273 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 RIOK1Q9BRS2 568 aaKnown RBP12.32□□□□□ -0.44
COL2A1-208ENST00000493991 FUCA2Q9BTY2 467 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 EIF3JO75822 258 aaKnown RBP12.32□□□□□ -0.44
COL2A1-208ENST00000493991 RAPGEF1Q13905 1077 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 PPP2R5BQ15173 497 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 AOC3Q16853 763 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 KRT25Q7Z3Z0 450 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 ENGASEQ8NFI3 743 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 STK32BQ9NY57 414 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 PCDHA12Q9UN75 941 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 BCS1LQ9Y276 419 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 KCNJ18B7U540 433 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 TAL1P17542 331 aaPredicted RBP12.32□□□□□ -0.44
COL2A1-208ENST00000493991 ALDH1B1P30837 517 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 SPAG1Q07617 926 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 KCNJ12Q14500 433 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 DLGAP5Q15398 846 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 VPS72Q15906 364 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 FBXO33Q7Z6M2 555 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 TBC1D16Q8TBP0 767 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 FAM217BQ9NTX9 383 aaPredicted RBP12.32□□□□□ -0.44
COL2A1-208ENST00000493991 DDX41Q9UJV9 622 aaKnown RBP12.32□□□□□ -0.44
COL2A1-208ENST00000493991 PCDHA4Q9UN74 947 aa12.32□□□□□ -0.44
COL2A1-208ENST00000493991 ENC1O14682 589 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 MYCLP12524 364 aaPredicted RBP12.31□□□□□ -0.44
COL2A1-208ENST00000493991 PLCG1P19174 1290 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 TOB1P50616 345 aaPredicted RBP12.31□□□□□ -0.44
COL2A1-208ENST00000493991 EN1Q05925 392 aaPredicted RBP12.31□□□□□ -0.44
COL2A1-208ENST00000493991 TROAPQ12815 778 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 MTF1Q14872 753 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 C12orf60Q5U649 245 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 ACBD3Q9H3P7 528 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
COL2A1-208ENST00000493991 SRCAPQ6ZRS2 3230 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 B4DLN1 442 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 SEMA3EO15041 775 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 MRPS25P82663 173 aaKnown RBP12.31□□□□□ -0.44
COL2A1-208ENST00000493991 PABPC4Q13310 644 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL2A1-208ENST00000493991 SEPT2Q15019 361 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 TPH2Q8IWU9 490 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 ACRBPQ8NEB7 543 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 PPP1R13BQ96KQ4 1090 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 NWD1Q149M9 1564 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 PNPLA7Q6ZV29 1317 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 USP17L10C9JJH3 530 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 RBL2Q08999 1139 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 SMC1AQ14683 1233 aaKnown RBP12.31□□□□□ -0.44
COL2A1-208ENST00000493991 NTRK3Q16288 839 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 AMIGO3Q86WK7 504 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 HDAC9Q9UKV0 1011 aa12.31□□□□□ -0.44
COL2A1-208ENST00000493991 ATP2C2O75185 946 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 SSR1P43307 286 aaKnown RBP12.3□□□□□ -0.44
COL2A1-208ENST00000493991 TYW1BQ6NUM6 668 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 KCNQ5Q9NR82 932 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 POLLQ9UGP5 575 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 KIAA1024Q9UPX6 916 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 SFI1A8K8P3 1242 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 TDP2O95551 362 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 GH2P01242 217 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 PDE6BP35913 854 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 ETF1P62495 437 aaKnown RBP12.3□□□□□ -0.44
COL2A1-208ENST00000493991 SYCP1Q15431 976 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 SH2D3AQ9BRG2 576 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.3□□□□□ -0.44
COL2A1-208ENST00000493991 FBXO2Q9UK22 296 aaPredicted RBP12.3□□□□□ -0.44
COL2A1-208ENST00000493991 PPP2R2CQ9Y2T4 447 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 PCDHB13Q9Y5F0 798 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 RFX7Q2KHR2 1363 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 NFIAQ12857 509 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 PLA2G4DQ86XP0 818 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 TMEM60Q9H2L4 133 aa12.3□□□□□ -0.44
COL2A1-208ENST00000493991 ARHGAP6O43182 974 aa12.29□□□□□ -0.44
COL2A1-208ENST00000493991 ZBTB7AO95365 584 aa12.29□□□□□ -0.44
COL2A1-208ENST00000493991 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms