RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 CPXCR1Q8N123 301 aa13.67□□□□□ -0.22
UBA3-211ENST00000493957 USP6NLQ92738 828 aa13.67□□□□□ -0.22
UBA3-211ENST00000493957 LRRC2Q9BYS8 371 aa13.67□□□□□ -0.22
UBA3-211ENST00000493957 KAT14Q9H8E8 782 aa13.67□□□□□ -0.22
UBA3-211ENST00000493957 SLC38A10Q9HBR0 1119 aa13.67□□□□□ -0.22
UBA3-211ENST00000493957 PRR12Q9ULL5 1215 aa13.67□□□□□ -0.22
UBA3-211ENST00000493957 ZNF536O15090 1300 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 PRC1O43663 620 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 ADCY3O60266 1144 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 CPA1P15085 419 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 CYP2B6P20813 491 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 HSPA4P34932 840 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 SLC4A3P48751 1232 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 NT5C2P49902 561 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 PRMT2P55345 433 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 CCNA1P78396 465 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 TRIM32Q13049 653 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 CCL14Q16627 93 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 SLC9C1Q4G0N8 1177 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 CCDC178Q5BJE1 867 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 SNRNP48Q6IEG0 339 aaKnown RBP13.66□□□□□ -0.22
UBA3-211ENST00000493957 CCDC174Q6PII3 467 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 FAM160B2Q86V87 743 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 RIOX2Q8IUF8 465 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 CCAR1Q8IX12 1150 aaKnown RBP13.66□□□□□ -0.22
UBA3-211ENST00000493957 IGDCC4Q8TDY8 1250 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 ARMC5Q96C12 935 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 TCEANC2Q96MN5 208 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 UBA5Q9GZZ9 404 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 LY9Q9HBG7 655 aa13.66□□□□□ -0.22
UBA3-211ENST00000493957 CWC22Q9HCG8 908 aaKnown RBP13.66□□□□□ -0.22
UBA3-211ENST00000493957 ZBED4O75132 1171 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 PTPREP23469 700 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 GRK4P32298 578 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 STAT3P40763 770 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 SOX10P56693 466 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 IRF5Q13568 498 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 GRB14Q14449 540 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 WTAPQ15007 396 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 MTFR1Q15390 333 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 TMEM67Q5HYA8 995 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 SYDE2Q5VT97 1194 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 BTNL9Q6UXG8 535 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 STAG2Q8N3U4 1231 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 SHCBP1Q8NEM2 672 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 CHURC1Q8WUH1 139 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 TRIB2Q92519 343 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 KCNB2Q92953 911 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 ZNF333Q96JL9 665 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 AGBL1Q96MI9 1066 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 NUDT12Q9BQG2 462 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 SNX14Q9Y5W7 946 aa13.65□□□□□ -0.22
UBA3-211ENST00000493957 SLC15A5A6NIM6 579 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 SH2B2O14492 632 aaPredicted RBP13.64□□□□□ -0.23
UBA3-211ENST00000493957 PLA2G6O60733 806 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 REC8O95072 547 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 MCM5P33992 734 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 MAP2K5Q13163 448 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 SLC35G1Q2M3R5 365 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 TSGA10IPQ3SY00 556 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 RNF20Q5VTR2 975 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 RAB11FIP4Q86YS3 637 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 NPLOC4Q8TAT6 608 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 SOCS4Q8WXH5 440 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 MYL10Q9BUA6 226 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 TEX13BQ9BXU2 312 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 USP26Q9BXU7 913 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 HOMER2Q9NSB8 354 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 FLRT1Q9NZU1 646 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 BRCA2P51587 3418 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 LRRC37A2A6NM11 1700 aa13.64□□□□□ -0.23
UBA3-211ENST00000493957 FAM205CA6NFA0 338 aa13.63□□□□□ -0.23
UBA3-211ENST00000493957 ATP2A1O14983 1001 aa13.63□□□□□ -0.23
UBA3-211ENST00000493957 COBLO75128 1261 aa13.63□□□□□ -0.23
UBA3-211ENST00000493957 INHAP05111 366 aa13.63□□□□□ -0.23
UBA3-211ENST00000493957 ADORA2AP29274 412 aa13.63□□□□□ -0.23
UBA3-211ENST00000493957 IFFO2Q5TF58 517 aa13.63□□□□□ -0.23
UBA3-211ENST00000493957 PDCD7Q8N8D1 485 aaKnown RBP13.63□□□□□ -0.23
UBA3-211ENST00000493957 NEK1Q96PY6 1258 aa13.63□□□□□ -0.23
UBA3-211ENST00000493957 RANBP17Q9H2T7 1088 aaKnown RBP13.63□□□□□ -0.23
UBA3-211ENST00000493957 MROH8Q9H579 483 aa13.63□□□□□ -0.23
UBA3-211ENST00000493957 MAD2L2Q9UI95 211 aa13.63□□□□□ -0.23
UBA3-211ENST00000493957 CTDP1Q9Y5B0 961 aaPredicted RBP13.63□□□□□ -0.23
UBA3-211ENST00000493957 IVNS1ABPQ9Y6Y0 642 aa13.63□□□□□ -0.23
UBA3-211ENST00000493957 ERICH2A1L162 156 aa13.62□□□□□ -0.23
UBA3-211ENST00000493957 SLC25A27O95847 323 aa13.62□□□□□ -0.23
UBA3-211ENST00000493957 PGK2P07205 417 aa13.62□□□□□ -0.23
UBA3-211ENST00000493957 PARP1P09874 1014 aaKnown RBP13.62□□□□□ -0.23
UBA3-211ENST00000493957 PYGBP11216 843 aa13.62□□□□□ -0.23
UBA3-211ENST00000493957 RXRAP19793 462 aa13.62□□□□□ -0.23
UBA3-211ENST00000493957 RGS2P41220 211 aa13.62□□□□□ -0.23
UBA3-211ENST00000493957 EXOSC10Q01780 885 aaKnown RBP13.62□□□□□ -0.23
UBA3-211ENST00000493957 GRM4Q14833 912 aa13.62□□□□□ -0.23
UBA3-211ENST00000493957 SART3Q15020 963 aaKnown RBP13.62□□□□□ -0.23
UBA3-211ENST00000493957 ASPRV1Q53RT3 343 aa13.62□□□□□ -0.23
UBA3-211ENST00000493957 MUM1L1Q5H9M0 696 aa13.62□□□□□ -0.23
UBA3-211ENST00000493957 JAKMIP1Q96N16 626 aaKnown RBP13.62□□□□□ -0.23
UBA3-211ENST00000493957 MMP19Q99542 508 aa13.62□□□□□ -0.23
UBA3-211ENST00000493957 APBA2Q99767 749 aa13.62□□□□□ -0.23
UBA3-211ENST00000493957 UNC93B1Q9H1C4 597 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms