RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 CHST3Q7LGC8 479 aa18.94■□□□□ 0.62
SATB1-217ENST00000493952 MB21D2Q8IYB1 491 aaPredicted RBP18.94■□□□□ 0.62
SATB1-217ENST00000493952 U2AF1L4Q8WU68 220 aaKnown RBP18.94■□□□□ 0.62
SATB1-217ENST00000493952 DEFB118Q96PH6 123 aa18.94■□□□□ 0.62
SATB1-217ENST00000493952 HMX1Q9NP08 348 aaPredicted RBP18.94■□□□□ 0.62
SATB1-217ENST00000493952 LRRC37A2A6NM11 1700 aa18.94■□□□□ 0.62
SATB1-217ENST00000493952 IGHA2P01877 340 aa18.93■□□□□ 0.62
SATB1-217ENST00000493952 GOLGA8HP0CJ92 632 aa18.93■□□□□ 0.62
SATB1-217ENST00000493952 ANTXR2P58335 489 aa18.93■□□□□ 0.62
SATB1-217ENST00000493952 AGBL1Q96MI9 1066 aa18.93■□□□□ 0.62
SATB1-217ENST00000493952 RANBP17Q9H2T7 1088 aaKnown RBP18.93■□□□□ 0.62
SATB1-217ENST00000493952 IFIT3O14879 490 aaKnown RBP18.92■□□□□ 0.62
SATB1-217ENST00000493952 SGPL1O95470 568 aa18.92■□□□□ 0.62
SATB1-217ENST00000493952 TAL1P17542 331 aaPredicted RBP18.92■□□□□ 0.62
SATB1-217ENST00000493952 CCND3P30281 292 aaPredicted RBP18.92■□□□□ 0.62
SATB1-217ENST00000493952 CYP2C19P33261 490 aa18.92■□□□□ 0.62
SATB1-217ENST00000493952 GPATCH4Q5T3I0 446 aaKnown RBP18.92■□□□□ 0.62
SATB1-217ENST00000493952 MFSD14CQ5VZR4 134 aa18.92■□□□□ 0.62
SATB1-217ENST00000493952 OLFML2BQ68BL8 750 aa18.92■□□□□ 0.62
SATB1-217ENST00000493952 CHST13Q8NET6 341 aa18.92■□□□□ 0.62
SATB1-217ENST00000493952 MAML3Q96JK9 1138 aa18.92■□□□□ 0.62
SATB1-217ENST00000493952 CPVLQ9H3G5 476 aa18.92■□□□□ 0.62
SATB1-217ENST00000493952 SENP2Q9HC62 589 aa18.92■□□□□ 0.62
SATB1-217ENST00000493952 HOMER2Q9NSB8 354 aa18.92■□□□□ 0.62
SATB1-217ENST00000493952 SLC5A4Q9NY91 659 aa18.92■□□□□ 0.62
SATB1-217ENST00000493952 COL9A3Q14050 684 aaPredicted RBP18.91■□□□□ 0.62
SATB1-217ENST00000493952 ZNF792Q3KQV3 632 aa18.91■□□□□ 0.62
SATB1-217ENST00000493952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.91■□□□□ 0.62
SATB1-217ENST00000493952 RNF146Q9NTX7 359 aa18.91■□□□□ 0.62
SATB1-217ENST00000493952 FBXO40Q9UH90 709 aa18.91■□□□□ 0.62
SATB1-217ENST00000493952 ERICH2A1L162 156 aa18.9■□□□□ 0.62
SATB1-217ENST00000493952 ICAM1P05362 532 aa18.9■□□□□ 0.62
SATB1-217ENST00000493952 ALAS1P13196 640 aa18.9■□□□□ 0.62
SATB1-217ENST00000493952 WTAPQ15007 396 aa18.9■□□□□ 0.62
SATB1-217ENST00000493952 ASPRV1Q53RT3 343 aa18.9■□□□□ 0.62
SATB1-217ENST00000493952 CRISPLD2Q9H0B8 497 aa18.9■□□□□ 0.62
SATB1-217ENST00000493952 ACAD9Q9H845 621 aa18.9■□□□□ 0.62
SATB1-217ENST00000493952 CCPG1Q9ULG6 757 aa18.9■□□□□ 0.62
SATB1-217ENST00000493952 DNAJC25-GNG10A0A024R161 153 aa18.89■□□□□ 0.61
SATB1-217ENST00000493952 PARP1P09874 1014 aaKnown RBP18.89■□□□□ 0.61
SATB1-217ENST00000493952 SART3Q15020 963 aaKnown RBP18.89■□□□□ 0.61
SATB1-217ENST00000493952 TKFCQ3LXA3 575 aa18.89■□□□□ 0.61
SATB1-217ENST00000493952 TMEM67Q5HYA8 995 aa18.89■□□□□ 0.61
SATB1-217ENST00000493952 RNF20Q5VTR2 975 aa18.89■□□□□ 0.61
SATB1-217ENST00000493952 ANKRD35Q8N283 1001 aa18.89■□□□□ 0.61
SATB1-217ENST00000493952 TRPV1Q8NER1 839 aa18.89■□□□□ 0.61
SATB1-217ENST00000493952 DDX11Q96FC9 970 aa18.89■□□□□ 0.61
SATB1-217ENST00000493952 TRERF1Q96PN7 1200 aa18.89■□□□□ 0.61
SATB1-217ENST00000493952 UBA5Q9GZZ9 404 aa18.89■□□□□ 0.61
SATB1-217ENST00000493952 DIS3Q9Y2L1 958 aaKnown RBP18.89■□□□□ 0.61
SATB1-217ENST00000493952 CYBAP13498 195 aa18.88■□□□□ 0.61
SATB1-217ENST00000493952 MUM1L1Q5H9M0 696 aa18.88■□□□□ 0.61
SATB1-217ENST00000493952 STAG2Q8N3U4 1231 aa18.88■□□□□ 0.61
SATB1-217ENST00000493952 IGDCC4Q8TDY8 1250 aa18.88■□□□□ 0.61
SATB1-217ENST00000493952 GPHNQ9NQX3 736 aaPredicted RBP18.88■□□□□ 0.61
SATB1-217ENST00000493952 MKI67P46013 3256 aaKnown RBP18.87■□□□□ 0.61
SATB1-217ENST00000493952 PRC1O43663 620 aa18.87■□□□□ 0.61
SATB1-217ENST00000493952 TFRCP02786 760 aaKnown RBP18.87■□□□□ 0.61
SATB1-217ENST00000493952 MCM5P33992 734 aa18.87■□□□□ 0.61
SATB1-217ENST00000493952 RASEFQ8IZ41 740 aa18.87■□□□□ 0.61
SATB1-217ENST00000493952 TINF2Q9BSI4 451 aa18.87■□□□□ 0.61
SATB1-217ENST00000493952 LY9Q9HBG7 655 aa18.87■□□□□ 0.61
SATB1-217ENST00000493952 A1CFQ9NQ94 594 aaKnown RBP18.87■□□□□ 0.61
SATB1-217ENST00000493952 WDR19Q8NEZ3 1342 aa18.86■□□□□ 0.61
SATB1-217ENST00000493952 CNGA1P29973 690 aa18.86■□□□□ 0.61
SATB1-217ENST00000493952 PRAMEF19Q5SWL8 479 aa18.86■□□□□ 0.61
SATB1-217ENST00000493952 UBE2Q1Q7Z7E8 422 aa18.86■□□□□ 0.61
SATB1-217ENST00000493952 ADGRF4Q8IZF3 695 aa18.86■□□□□ 0.61
SATB1-217ENST00000493952 FGD4Q96M96 766 aa18.86■□□□□ 0.61
SATB1-217ENST00000493952 MTA3Q9BTC8 594 aa18.86■□□□□ 0.61
SATB1-217ENST00000493952 MAD2L2Q9UI95 211 aa18.86■□□□□ 0.61
SATB1-217ENST00000493952 PALM3A6NDB9 673 aaPredicted RBP18.85■□□□□ 0.61
SATB1-217ENST00000493952 FARP2O94887 1054 aaPredicted RBP18.85■□□□□ 0.61
SATB1-217ENST00000493952 TROAPQ12815 778 aa18.85■□□□□ 0.61
SATB1-217ENST00000493952 GRM4Q14833 912 aa18.85■□□□□ 0.61
SATB1-217ENST00000493952 CDC37Q16543 378 aaPredicted RBP18.85■□□□□ 0.61
SATB1-217ENST00000493952 LHX8Q68G74 356 aa18.85■□□□□ 0.61
SATB1-217ENST00000493952 TMEM87BQ96K49 555 aa18.85■□□□□ 0.61
SATB1-217ENST00000493952 OGDHLQ9ULD0 1010 aa18.85■□□□□ 0.61
SATB1-217ENST00000493952 PFASO15067 1338 aa18.84■□□□□ 0.61
SATB1-217ENST00000493952 KLRF2D3W0D1 207 aa18.84■□□□□ 0.61
SATB1-217ENST00000493952 NFIBO00712 420 aa18.84■□□□□ 0.61
SATB1-217ENST00000493952 SH2B2O14492 632 aaPredicted RBP18.84■□□□□ 0.61
SATB1-217ENST00000493952 DHX16O60231 1041 aaKnown RBP18.84■□□□□ 0.61
SATB1-217ENST00000493952 CAPN2P17655 700 aa18.84■□□□□ 0.61
SATB1-217ENST00000493952 CNTN2Q02246 1040 aa18.84■□□□□ 0.61
SATB1-217ENST00000493952 ADCK5Q3MIX3 580 aa18.84■□□□□ 0.61
SATB1-217ENST00000493952 TSGA10IPQ3SY00 556 aa18.84■□□□□ 0.61
SATB1-217ENST00000493952 ZNF467Q7Z7K2 595 aaPredicted RBP18.84■□□□□ 0.61
SATB1-217ENST00000493952 ZNF654Q8IZM8 581 aa18.84■□□□□ 0.61
SATB1-217ENST00000493952 FAM133AQ8N9E0 248 aa18.84■□□□□ 0.61
SATB1-217ENST00000493952 NEK1Q96PY6 1258 aa18.84■□□□□ 0.61
SATB1-217ENST00000493952 LRRC2Q9BYS8 371 aa18.84■□□□□ 0.61
SATB1-217ENST00000493952 JMJD4Q9H9V9 463 aa18.84■□□□□ 0.61
SATB1-217ENST00000493952 DDX20Q9UHI6 824 aaKnown RBP18.84■□□□□ 0.61
SATB1-217ENST00000493952 KIAA1217Q5T5P2 1943 aa18.84■□□□□ 0.61
SATB1-217ENST00000493952 POTEB2H3BUK9 544 aa18.83■□□□□ 0.6
SATB1-217ENST00000493952 REC8O95072 547 aa18.83■□□□□ 0.6
SATB1-217ENST00000493952 HSPA4P34932 840 aa18.83■□□□□ 0.6
SATB1-217ENST00000493952 QRICH1Q2TAL8 776 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms