RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 C12orf49Q9H741 205 aa8.12□□□□□ -1.11
TRA2B-216ENST00000493864 ANKRD36CQ5JPF3 1778 aa8.12□□□□□ -1.11
TRA2B-216ENST00000493864 CHD4Q14839 1912 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 CDHR2Q9BYE9 1310 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 FAM181BA6NEQ2 426 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 POLRMTO00411 1230 aaKnown RBP8.11□□□□□ -1.11
TRA2B-216ENST00000493864 GNB5O14775 395 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 GIPC1O14908 333 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 SRGAP3O43295 1099 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 PDE8AO60658 829 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 CSF1RP07333 972 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 EPHA1P21709 976 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 EIF4BP23588 611 aaKnown RBP8.11□□□□□ -1.11
TRA2B-216ENST00000493864 MTX1Q13505 466 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 RABL6Q3YEC7 729 aaPredicted RBP8.11□□□□□ -1.11
TRA2B-216ENST00000493864 TXNDC11Q6PKC3 985 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 TPTE2Q6XPS3 522 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 TMC4Q7Z404 712 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 CACTIN-AS1Q8N1I8 211 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 BEND7Q8N7W2 519 aaPredicted RBP8.11□□□□□ -1.11
TRA2B-216ENST00000493864 SSH3Q8TE77 659 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 TRIM11Q96F44 468 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 PLA2G12BQ9BX93 195 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 PLVAPQ9BX97 442 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 NYXQ9GZU5 481 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 BCL11AQ9H165 835 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 MUC3BQ9H195 1237 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 SOX13Q9UN79 622 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 PPME1Q9Y570 386 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 AK5Q9Y6K8 562 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 SCN7AQ01118 1682 aa8.11□□□□□ -1.11
TRA2B-216ENST00000493864 KDM2BQ8NHM5 1336 aa8.1□□□□□ -1.11
TRA2B-216ENST00000493864 LINC01387J3KSC0 135 aa8.1□□□□□ -1.11
TRA2B-216ENST00000493864 PIK3R2O00459 728 aa8.1□□□□□ -1.11
TRA2B-216ENST00000493864 HMMRO75330 724 aa8.1□□□□□ -1.11
TRA2B-216ENST00000493864 MMP10P09238 476 aa8.1□□□□□ -1.11
TRA2B-216ENST00000493864 PRR5LQ6MZQ0 368 aa8.1□□□□□ -1.11
TRA2B-216ENST00000493864 DTHD1Q6ZMT9 781 aa8.1□□□□□ -1.11
TRA2B-216ENST00000493864 CENPQQ7L2Z9 268 aaPredicted RBP8.1□□□□□ -1.11
TRA2B-216ENST00000493864 TTLL11Q8NHH1 800 aa8.1□□□□□ -1.11
TRA2B-216ENST00000493864 DCTPP1Q9H773 170 aa8.1□□□□□ -1.11
TRA2B-216ENST00000493864 PA2G4Q9UQ80 394 aaKnown RBP8.1□□□□□ -1.11
TRA2B-216ENST00000493864 CARMIL3Q8ND23 1372 aa8.1□□□□□ -1.11
TRA2B-216ENST00000493864 KIF13BQ9NQT8 1826 aa8.09□□□□□ -1.11
TRA2B-216ENST00000493864 SORBS3O60504 671 aa8.09□□□□□ -1.11
TRA2B-216ENST00000493864 USP17L7P0C7H9 530 aa8.09□□□□□ -1.11
TRA2B-216ENST00000493864 GSTT1P30711 240 aa8.09□□□□□ -1.11
TRA2B-216ENST00000493864 RFX5P48382 616 aaPredicted RBP8.09□□□□□ -1.11
TRA2B-216ENST00000493864 CTSWP56202 376 aa8.09□□□□□ -1.11
TRA2B-216ENST00000493864 SMC5Q8IY18 1101 aa8.09□□□□□ -1.11
TRA2B-216ENST00000493864 CNBD1Q8NA66 436 aa8.09□□□□□ -1.11
TRA2B-216ENST00000493864 KLHDC4Q8TBB5 520 aa8.09□□□□□ -1.11
TRA2B-216ENST00000493864 SCARF2Q96GP6 870 aaPredicted RBP8.09□□□□□ -1.11
TRA2B-216ENST00000493864 FAM8A1Q9UBU6 413 aa8.09□□□□□ -1.11
TRA2B-216ENST00000493864 VTI1BQ9UEU0 232 aa8.09□□□□□ -1.11
TRA2B-216ENST00000493864 AKAP2Q9Y2D5 859 aa8.09□□□□□ -1.11
TRA2B-216ENST00000493864 KIAA1551Q9HCM1 1747 aa8.09□□□□□ -1.11
TRA2B-216ENST00000493864 ABCC12Q96J65 1359 aa8.09□□□□□ -1.12
TRA2B-216ENST00000493864 NPHP1O15259 732 aa8.08□□□□□ -1.12
TRA2B-216ENST00000493864 SURF6O75683 361 aaKnown RBP8.08□□□□□ -1.12
TRA2B-216ENST00000493864 HSP90B1P14625 803 aaKnown RBP8.08□□□□□ -1.12
TRA2B-216ENST00000493864 ITPKAP23677 461 aa8.08□□□□□ -1.12
TRA2B-216ENST00000493864 PTPN12Q05209 780 aaKnown RBP8.08□□□□□ -1.12
TRA2B-216ENST00000493864 SF3B3Q15393 1217 aaKnown RBP8.08□□□□□ -1.12
TRA2B-216ENST00000493864 ANKRD45Q5TZF3 282 aa8.08□□□□□ -1.12
TRA2B-216ENST00000493864 VN1R5Q7Z5H4 357 aa8.08□□□□□ -1.12
TRA2B-216ENST00000493864 SKAP1Q86WV1 359 aa8.08□□□□□ -1.12
TRA2B-216ENST00000493864 GREM2Q9H772 168 aa8.08□□□□□ -1.12
TRA2B-216ENST00000493864 SEC31BQ9NQW1 1179 aa8.08□□□□□ -1.12
TRA2B-216ENST00000493864 EXOC6BQ9Y2D4 811 aa8.08□□□□□ -1.12
TRA2B-216ENST00000493864 NOP58Q9Y2X3 529 aaKnown RBP8.08□□□□□ -1.12
TRA2B-216ENST00000493864 BRCA1P38398 1863 aaKnown RBP8.07□□□□□ -1.12
TRA2B-216ENST00000493864 CACNA1SQ13698 1873 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 FAM229AH3BQW9 127 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 H3BRJ5 948 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 SMARCA5O60264 1052 aaPredicted RBP8.07□□□□□ -1.12
TRA2B-216ENST00000493864 POLD1P28340 1107 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 RBM25P49756 843 aaKnown RBP8.07□□□□□ -1.12
TRA2B-216ENST00000493864 IFIT5Q13325 482 aaKnown RBP8.07□□□□□ -1.12
TRA2B-216ENST00000493864 IKBKEQ14164 716 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 CCDC57Q2TAC2 916 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 CCDC152Q4G0S7 254 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 FAM117BQ6P1L5 589 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 NLGN2Q8NFZ4 835 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 SLC7A3Q8WY07 619 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 GCC1Q96CN9 775 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 SYT17Q9BSW7 474 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 PUS3Q9BZE2 481 aaKnown RBP8.07□□□□□ -1.12
TRA2B-216ENST00000493864 SIL1Q9H173 461 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 CLEC4MQ9H2X3 399 aaPredicted RBP8.07□□□□□ -1.12
TRA2B-216ENST00000493864 ZNF576Q9H609 170 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 COPRSQ9NQ92 184 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 STK17AQ9UEE5 414 aa8.07□□□□□ -1.12
TRA2B-216ENST00000493864 A0A0A0MRY4 1105 aa8.06□□□□□ -1.12
TRA2B-216ENST00000493864 ANKRD18BA2A2Z9 1011 aa8.06□□□□□ -1.12
TRA2B-216ENST00000493864 UNCXA6NJT0 531 aa8.06□□□□□ -1.12
TRA2B-216ENST00000493864 SPDYE3A6NKU9 549 aa8.06□□□□□ -1.12
TRA2B-216ENST00000493864 RAB11FIP3O75154 756 aa8.06□□□□□ -1.12
TRA2B-216ENST00000493864 XRCC5P13010 732 aaKnown RBP8.06□□□□□ -1.12
TRA2B-216ENST00000493864 RAC1P63000 192 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms