RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 RANBP17Q9H2T7 1088 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 RIPK3Q9Y572 518 aa20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 ZNF536O15090 1300 aa20.79■□□□□ 0.92
PDLIM7-208ENST00000493815 A0A0G2JMZ2 1700 aa20.79■□□□□ 0.92
PDLIM7-208ENST00000493815 PPFIA3O75145 1194 aa20.79■□□□□ 0.92
PDLIM7-208ENST00000493815 PSMC4P43686 418 aa20.79■□□□□ 0.92
PDLIM7-208ENST00000493815 HOMER1Q86YM7 354 aa20.79■□□□□ 0.92
PDLIM7-208ENST00000493815 TRIM47Q96LD4 638 aa20.79■□□□□ 0.92
PDLIM7-208ENST00000493815 COL11A1P12107 1806 aaPredicted RBP20.79■□□□□ 0.92
PDLIM7-208ENST00000493815 ZSWIM8A7E2V4 1837 aa20.78■□□□□ 0.92
PDLIM7-208ENST00000493815 hCG_1642624A0A1W2PR95 340 aa20.78■□□□□ 0.92
PDLIM7-208ENST00000493815 ERCC3P19447 782 aa20.78■□□□□ 0.92
PDLIM7-208ENST00000493815 CDC37Q16543 378 aaPredicted RBP20.78■□□□□ 0.92
PDLIM7-208ENST00000493815 TMTC3Q6ZXV5 915 aa20.78■□□□□ 0.92
PDLIM7-208ENST00000493815 NCAPG2Q86XI2 1143 aa20.78■□□□□ 0.92
PDLIM7-208ENST00000493815 TEX13BQ9BXU2 312 aa20.78■□□□□ 0.92
PDLIM7-208ENST00000493815 HOMER2Q9NSB8 354 aa20.78■□□□□ 0.92
PDLIM7-208ENST00000493815 CASP8AP2Q9UKL3 1982 aa20.78■□□□□ 0.92
PDLIM7-208ENST00000493815 DTNBO60941 627 aa20.77■□□□□ 0.92
PDLIM7-208ENST00000493815 LARGE1O95461 756 aa20.77■□□□□ 0.92
PDLIM7-208ENST00000493815 FMNL1O95466 1100 aaPredicted RBP20.77■□□□□ 0.92
PDLIM7-208ENST00000493815 ANKRD1Q15327 319 aa20.77■□□□□ 0.92
PDLIM7-208ENST00000493815 CCAR1Q8IX12 1150 aaKnown RBP20.77■□□□□ 0.92
PDLIM7-208ENST00000493815 ZNF274Q96GC6 653 aaPredicted RBP20.77■□□□□ 0.92
PDLIM7-208ENST00000493815 PIGSQ96S52 555 aa20.77■□□□□ 0.92
PDLIM7-208ENST00000493815 GNAQP50148 359 aa20.77■□□□□ 0.91
PDLIM7-208ENST00000493815 RCAN1P53805 252 aa20.77■□□□□ 0.91
PDLIM7-208ENST00000493815 CCNA1P78396 465 aa20.77■□□□□ 0.91
PDLIM7-208ENST00000493815 KIF22Q14807 665 aa20.77■□□□□ 0.91
PDLIM7-208ENST00000493815 QRICH1Q2TAL8 776 aa20.77■□□□□ 0.91
PDLIM7-208ENST00000493815 ERO1AQ96HE7 468 aa20.77■□□□□ 0.91
PDLIM7-208ENST00000493815 RIOX1Q9H6W3 641 aa20.77■□□□□ 0.91
PDLIM7-208ENST00000493815 RBM28Q9NW13 759 aaKnown RBP20.77■□□□□ 0.91
PDLIM7-208ENST00000493815 CCPG1Q9ULG6 757 aa20.77■□□□□ 0.91
PDLIM7-208ENST00000493815 BAZ2BQ9UIF8 2168 aaKnown RBP20.76■□□□□ 0.91
PDLIM7-208ENST00000493815 CD2BP2O95400 341 aaKnown RBP20.76■□□□□ 0.91
PDLIM7-208ENST00000493815 FDX1P10109 184 aa20.76■□□□□ 0.91
PDLIM7-208ENST00000493815 ME3Q16798 604 aa20.76■□□□□ 0.91
PDLIM7-208ENST00000493815 USH1GQ495M9 461 aa20.76■□□□□ 0.91
PDLIM7-208ENST00000493815 RIOX2Q8IUF8 465 aa20.76■□□□□ 0.91
PDLIM7-208ENST00000493815 NECAB1Q8N987 351 aa20.76■□□□□ 0.91
PDLIM7-208ENST00000493815 TNPO2O14787 897 aaKnown RBP20.75■□□□□ 0.91
PDLIM7-208ENST00000493815 ATP2A1O14983 1001 aa20.75■□□□□ 0.91
PDLIM7-208ENST00000493815 PPP1R11O60927 126 aaPredicted RBP20.75■□□□□ 0.91
PDLIM7-208ENST00000493815 ICAM1P05362 532 aa20.75■□□□□ 0.91
PDLIM7-208ENST00000493815 ALAS1P13196 640 aa20.75■□□□□ 0.91
PDLIM7-208ENST00000493815 OAZ1P54368 228 aa20.75■□□□□ 0.91
PDLIM7-208ENST00000493815 FCGRTP55899 365 aa20.75■□□□□ 0.91
PDLIM7-208ENST00000493815 LZTS2Q9BRK4 669 aa20.75■□□□□ 0.91
PDLIM7-208ENST00000493815 SPZ1Q9BXG8 430 aa20.75■□□□□ 0.91
PDLIM7-208ENST00000493815 FUT2Q10981 343 aa20.74■□□□□ 0.91
PDLIM7-208ENST00000493815 SCRN1Q12765 414 aa20.74■□□□□ 0.91
PDLIM7-208ENST00000493815 GPR142Q7Z601 462 aa20.74■□□□□ 0.91
PDLIM7-208ENST00000493815 MTMR8Q96EF0 704 aa20.74■□□□□ 0.91
PDLIM7-208ENST00000493815 SLKQ9H2G2 1235 aaPredicted RBP20.74■□□□□ 0.91
PDLIM7-208ENST00000493815 CWC22Q9HCG8 908 aaKnown RBP20.74■□□□□ 0.91
PDLIM7-208ENST00000493815 NID2Q14112 1375 aa20.74■□□□□ 0.91
PDLIM7-208ENST00000493815 HTTP42858 3142 aa20.74■□□□□ 0.91
PDLIM7-208ENST00000493815 ZBTB5O15062 677 aa20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 MAPK4P31152 587 aa20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 TRIM17Q9Y577 477 aa20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 CNTNAP5Q8WYK1 1306 aa20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 CCDC196A0A1B0GTZ2 297 aa20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 SLC25A27O95847 323 aa20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 MUM1L1Q5H9M0 696 aa20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 PLEKHH3Q7Z736 793 aa20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 PHKBQ93100 1093 aa20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 RRP36Q96EU6 259 aaKnown RBP20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 TRERF1Q96PN7 1200 aa20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 LIMCH1Q9UPQ0 1083 aa20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 V9GY48 417 aaPredicted RBP20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 CENPFP49454 3210 aa20.73■□□□□ 0.91
PDLIM7-208ENST00000493815 ST18O60284 1047 aa20.72■□□□□ 0.91
PDLIM7-208ENST00000493815 PFKFB2O60825 505 aa20.72■□□□□ 0.91
PDLIM7-208ENST00000493815 SMARCA1P28370 1054 aa20.72■□□□□ 0.91
PDLIM7-208ENST00000493815 NTRK3Q16288 839 aa20.72■□□□□ 0.91
PDLIM7-208ENST00000493815 OTOP1Q7RTM1 612 aa20.72■□□□□ 0.91
PDLIM7-208ENST00000493815 FBXO11Q86XK2 927 aa20.72■□□□□ 0.91
PDLIM7-208ENST00000493815 SHCBP1Q8NEM2 672 aa20.72■□□□□ 0.91
PDLIM7-208ENST00000493815 MROH8Q9H579 483 aa20.72■□□□□ 0.91
PDLIM7-208ENST00000493815 RNF146Q9NTX7 359 aa20.72■□□□□ 0.91
PDLIM7-208ENST00000493815 GABRQQ9UN88 632 aa20.72■□□□□ 0.91
PDLIM7-208ENST00000493815 SMCHD1A6NHR9 2005 aa20.71■□□□□ 0.91
PDLIM7-208ENST00000493815 PNMA6FA0A0J9YX94 578 aa20.71■□□□□ 0.91
PDLIM7-208ENST00000493815 PRKCZQ05513 592 aa20.71■□□□□ 0.91
PDLIM7-208ENST00000493815 PPP2R5BQ15173 497 aa20.71■□□□□ 0.91
PDLIM7-208ENST00000493815 COA7Q96BR5 231 aa20.71■□□□□ 0.91
PDLIM7-208ENST00000493815 AMNQ9BXJ7 453 aa20.7■□□□□ 0.91
PDLIM7-208ENST00000493815 PRDM10Q9NQV6 1147 aa20.7■□□□□ 0.91
PDLIM7-208ENST00000493815 SEC63Q9UGP8 760 aaKnown RBP20.7■□□□□ 0.91
PDLIM7-208ENST00000493815 IVNS1ABPQ9Y6Y0 642 aa20.7■□□□□ 0.91
PDLIM7-208ENST00000493815 NFIBO00712 420 aa20.7■□□□□ 0.9
PDLIM7-208ENST00000493815 CPLX1O14810 134 aa20.7■□□□□ 0.9
PDLIM7-208ENST00000493815 ST3GAL1Q11201 340 aa20.7■□□□□ 0.9
PDLIM7-208ENST00000493815 SLC26A6Q9BXS9 759 aa20.7■□□□□ 0.9
PDLIM7-208ENST00000493815 GJD2Q9UKL4 321 aa20.7■□□□□ 0.9
PDLIM7-208ENST00000493815 PCDHA1Q9Y5I3 950 aa20.7■□□□□ 0.9
PDLIM7-208ENST00000493815 PGK2P07205 417 aa20.69■□□□□ 0.9
PDLIM7-208ENST00000493815 FCER1AP12319 257 aa20.69■□□□□ 0.9
PDLIM7-208ENST00000493815 PTPREP23469 700 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms