RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 TSPY3P0CV98 308 aa20.68■□□□□ 0.9
COL9A1-210ENST00000493682 TSPY8P0CW00 308 aa20.68■□□□□ 0.9
COL9A1-210ENST00000493682 BMP3P12645 472 aa20.68■□□□□ 0.9
COL9A1-210ENST00000493682 CST5P28325 142 aaPredicted RBP20.68■□□□□ 0.9
COL9A1-210ENST00000493682 FPGSQ05932 587 aa20.68■□□□□ 0.9
COL9A1-210ENST00000493682 PDE4BQ07343 736 aa20.68■□□□□ 0.9
COL9A1-210ENST00000493682 PI4K2BQ8TCG2 481 aa20.68■□□□□ 0.9
COL9A1-210ENST00000493682 ABHD16BQ9H3Z7 469 aa20.68■□□□□ 0.9
COL9A1-210ENST00000493682 ERC2O15083 957 aa20.67■□□□□ 0.9
COL9A1-210ENST00000493682 C6orf222P0C671 652 aaPredicted RBP20.67■□□□□ 0.9
COL9A1-210ENST00000493682 TFAP4Q01664 338 aa20.67■□□□□ 0.9
COL9A1-210ENST00000493682 CCDC144BQ3MJ40 725 aa20.67■□□□□ 0.9
COL9A1-210ENST00000493682 ARMCX2Q7L311 632 aa20.67■□□□□ 0.9
COL9A1-210ENST00000493682 OTUD7AQ8TE49 926 aaPredicted RBP20.67■□□□□ 0.9
COL9A1-210ENST00000493682 COL25A1Q9BXS0 654 aaPredicted RBP20.67■□□□□ 0.9
COL9A1-210ENST00000493682 NAPBQ9H115 298 aa20.67■□□□□ 0.9
COL9A1-210ENST00000493682 HOMER2Q9NSB8 354 aa20.67■□□□□ 0.9
COL9A1-210ENST00000493682 CUL9Q8IWT3 2517 aa20.66■□□□□ 0.9
COL9A1-210ENST00000493682 TMEM232C9JQI7 657 aa20.66■□□□□ 0.9
COL9A1-210ENST00000493682 SLC3A2P08195 630 aaKnown RBP20.66■□□□□ 0.9
COL9A1-210ENST00000493682 FDX1P10109 184 aa20.66■□□□□ 0.9
COL9A1-210ENST00000493682 PPARAQ07869 468 aa20.66■□□□□ 0.9
COL9A1-210ENST00000493682 ZMYM1Q5SVZ6 1142 aa20.66■□□□□ 0.9
COL9A1-210ENST00000493682 CCDC144CPQ8IYA2 1237 aa20.66■□□□□ 0.9
COL9A1-210ENST00000493682 PCSK9Q8NBP7 692 aaKnown RBP20.66■□□□□ 0.9
COL9A1-210ENST00000493682 MYLIPQ8WY64 445 aa20.66■□□□□ 0.9
COL9A1-210ENST00000493682 GLT1D1Q96MS3 346 aa20.66■□□□□ 0.9
COL9A1-210ENST00000493682 FSD1Q9BTV5 496 aa20.66■□□□□ 0.9
COL9A1-210ENST00000493682 UPF3AQ9H1J1 476 aaKnown RBP20.66■□□□□ 0.9
COL9A1-210ENST00000493682 TBX21Q9UL17 535 aa20.66■□□□□ 0.9
COL9A1-210ENST00000493682 ISY1Q9ULR0 285 aaKnown RBP20.66■□□□□ 0.9
COL9A1-210ENST00000493682 PCDHB15Q9Y5E8 787 aa20.66■□□□□ 0.9
COL9A1-210ENST00000493682 ELP1O95163 1332 aa20.66■□□□□ 0.9
COL9A1-210ENST00000493682 TIMP1P01033 207 aa20.65■□□□□ 0.9
COL9A1-210ENST00000493682 ASGR1P07306 291 aa20.65■□□□□ 0.9
COL9A1-210ENST00000493682 CDK7P50613 346 aa20.65■□□□□ 0.9
COL9A1-210ENST00000493682 STAT2P52630 851 aa20.65■□□□□ 0.9
COL9A1-210ENST00000493682 GJA9P57773 515 aa20.65■□□□□ 0.9
COL9A1-210ENST00000493682 CNTN2Q02246 1040 aa20.65■□□□□ 0.9
COL9A1-210ENST00000493682 MAFAQ8NHW3 353 aaPredicted RBP20.65■□□□□ 0.9
COL9A1-210ENST00000493682 GMCL1Q96IK5 515 aa20.65■□□□□ 0.9
COL9A1-210ENST00000493682 KATNBL1Q9H079 304 aa20.65■□□□□ 0.9
COL9A1-210ENST00000493682 SPC25Q9HBM1 224 aa20.65■□□□□ 0.9
COL9A1-210ENST00000493682 ZNF536O15090 1300 aa20.64■□□□□ 0.89
COL9A1-210ENST00000493682 MROH7Q68CQ1 1323 aa20.64■□□□□ 0.89
COL9A1-210ENST00000493682 GNASQ5JWF2 1037 aa20.64■□□□□ 0.89
COL9A1-210ENST00000493682 FAM160B2Q86V87 743 aa20.64■□□□□ 0.89
COL9A1-210ENST00000493682 FAM133AQ8N9E0 248 aa20.64■□□□□ 0.89
COL9A1-210ENST00000493682 CHURC1Q8WUH1 139 aa20.64■□□□□ 0.89
COL9A1-210ENST00000493682 STAG1Q8WVM7 1258 aa20.64■□□□□ 0.89
COL9A1-210ENST00000493682 VTI1AQ96AJ9 217 aa20.64■□□□□ 0.89
COL9A1-210ENST00000493682 CHMP4CQ96CF2 233 aa20.64■□□□□ 0.89
COL9A1-210ENST00000493682 AGBL1Q96MI9 1066 aa20.64■□□□□ 0.89
COL9A1-210ENST00000493682 ACAD9Q9H845 621 aa20.64■□□□□ 0.89
COL9A1-210ENST00000493682 MCM3APO60318 1980 aa20.63■□□□□ 0.89
COL9A1-210ENST00000493682 TMEM265A0A087WTH1 108 aa20.63■□□□□ 0.89
COL9A1-210ENST00000493682 MCCP23508 829 aa20.63■□□□□ 0.89
COL9A1-210ENST00000493682 SLC1A4P43007 532 aa20.63■□□□□ 0.89
COL9A1-210ENST00000493682 IKQ13123 557 aaPredicted RBP20.63■□□□□ 0.89
COL9A1-210ENST00000493682 A1CFQ9NQ94 594 aaKnown RBP20.63■□□□□ 0.89
COL9A1-210ENST00000493682 RNF146Q9NTX7 359 aa20.63■□□□□ 0.89
COL9A1-210ENST00000493682 EYSQ5T1H1 3165 aa20.63■□□□□ 0.89
COL9A1-210ENST00000493682 CTAGE5O15320 804 aa20.62■□□□□ 0.89
COL9A1-210ENST00000493682 FOXP2O15409 715 aa20.62■□□□□ 0.89
COL9A1-210ENST00000493682 NKX3-2P78367 333 aa20.62■□□□□ 0.89
COL9A1-210ENST00000493682 MFSD5Q6N075 450 aa20.62■□□□□ 0.89
COL9A1-210ENST00000493682 INCENPQ9NQS7 918 aa20.62■□□□□ 0.89
COL9A1-210ENST00000493682 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.62■□□□□ 0.89
COL9A1-210ENST00000493682 A0A0U1RQG5 324 aaPredicted RBP20.61■□□□□ 0.89
COL9A1-210ENST00000493682 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.61■□□□□ 0.89
COL9A1-210ENST00000493682 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.61■□□□□ 0.89
COL9A1-210ENST00000493682 SOWAHBA6NEL2 793 aa20.61■□□□□ 0.89
COL9A1-210ENST00000493682 ARVCFO00192 962 aa20.61■□□□□ 0.89
COL9A1-210ENST00000493682 PLA2G6O60733 806 aa20.61■□□□□ 0.89
COL9A1-210ENST00000493682 FOSL2P15408 326 aa20.61■□□□□ 0.89
COL9A1-210ENST00000493682 MX1P20591 662 aa20.61■□□□□ 0.89
COL9A1-210ENST00000493682 TKFCQ3LXA3 575 aa20.61■□□□□ 0.89
COL9A1-210ENST00000493682 PPP4R3BQ5MIZ7 849 aa20.61■□□□□ 0.89
COL9A1-210ENST00000493682 CCDC129Q6ZRS4 1044 aa20.61■□□□□ 0.89
COL9A1-210ENST00000493682 TRERF1Q96PN7 1200 aa20.61■□□□□ 0.89
COL9A1-210ENST00000493682 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.61■□□□□ 0.89
COL9A1-210ENST00000493682 IL17RBQ9NRM6 502 aa20.61■□□□□ 0.89
COL9A1-210ENST00000493682 STX8Q9UNK0 236 aa20.61■□□□□ 0.89
COL9A1-210ENST00000493682 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.6■□□□□ 0.89
COL9A1-210ENST00000493682 TSPY2A6NKD2 308 aa20.6■□□□□ 0.89
COL9A1-210ENST00000493682 NMT2O60551 498 aa20.6■□□□□ 0.89
COL9A1-210ENST00000493682 ALAS1P13196 640 aa20.6■□□□□ 0.89
COL9A1-210ENST00000493682 DNAJB2P25686 324 aa20.6■□□□□ 0.89
COL9A1-210ENST00000493682 SNAP25P60880 206 aa20.6■□□□□ 0.89
COL9A1-210ENST00000493682 BEX3Q00994 111 aa20.6■□□□□ 0.89
COL9A1-210ENST00000493682 TNFAIP2Q03169 654 aa20.6■□□□□ 0.89
COL9A1-210ENST00000493682 CTDSPL2Q05D32 466 aa20.6■□□□□ 0.89
COL9A1-210ENST00000493682 RCSD1Q6JBY9 416 aa20.6■□□□□ 0.89
COL9A1-210ENST00000493682 KCTD1Q719H9 257 aa20.6■□□□□ 0.89
COL9A1-210ENST00000493682 FAM126BQ8IXS8 530 aa20.6■□□□□ 0.89
COL9A1-210ENST00000493682 ASTN1O14525 1302 aa20.59■□□□□ 0.89
COL9A1-210ENST00000493682 ASB14A6NK59 587 aa20.59■□□□□ 0.89
COL9A1-210ENST00000493682 PPIGQ13427 754 aaKnown RBP eCLIP20.59■□□□□ 0.89
COL9A1-210ENST00000493682 CCDC174Q6PII3 467 aa20.59■□□□□ 0.89
COL9A1-210ENST00000493682 NOL8Q76FK4 1167 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms