RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 RCSD1Q6JBY9 416 aa17.32■□□□□ 0.36
ATG4B-223ENST00000493618 FAM160B2Q86V87 743 aa17.32■□□□□ 0.36
ATG4B-223ENST00000493618 TDHQ8IZJ6 230 aa17.32■□□□□ 0.36
ATG4B-223ENST00000493618 CHST13Q8NET6 341 aa17.32■□□□□ 0.36
ATG4B-223ENST00000493618 CHURC1Q8WUH1 139 aa17.32■□□□□ 0.36
ATG4B-223ENST00000493618 FGD4Q96M96 766 aa17.32■□□□□ 0.36
ATG4B-223ENST00000493618 PRDM5Q9NQX1 630 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-223ENST00000493618 SYNGAP1Q96PV0 1343 aa17.31■□□□□ 0.36
ATG4B-223ENST00000493618 FGRP09769 529 aa17.31■□□□□ 0.36
ATG4B-223ENST00000493618 ALAS1P13196 640 aa17.31■□□□□ 0.36
ATG4B-223ENST00000493618 CNTN2Q02246 1040 aa17.31■□□□□ 0.36
ATG4B-223ENST00000493618 PPP4R3BQ5MIZ7 849 aa17.31■□□□□ 0.36
ATG4B-223ENST00000493618 RNF146Q9NTX7 359 aa17.31■□□□□ 0.36
ATG4B-223ENST00000493618 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-223ENST00000493618 PRKAG2Q9UGJ0 569 aa17.31■□□□□ 0.36
ATG4B-223ENST00000493618 FBXO40Q9UH90 709 aa17.31■□□□□ 0.36
ATG4B-223ENST00000493618 PRR12Q9ULL5 1215 aa17.31■□□□□ 0.36
ATG4B-223ENST00000493618 SUPT16HQ9Y5B9 1047 aaKnown RBP17.31■□□□□ 0.36
ATG4B-223ENST00000493618 LAMA3Q16787 3333 aa17.3■□□□□ 0.36
ATG4B-223ENST00000493618 FRMPD2Q68DX3 1309 aaPredicted RBP17.3■□□□□ 0.36
ATG4B-223ENST00000493618 SLC16A2P36021 539 aa17.3■□□□□ 0.36
ATG4B-223ENST00000493618 IRX5P78411 483 aaPredicted RBP17.3■□□□□ 0.36
ATG4B-223ENST00000493618 TTBK2Q6IQ55 1244 aa17.3■□□□□ 0.36
ATG4B-223ENST00000493618 MAMDC4Q6UXC1 1216 aa17.3■□□□□ 0.36
ATG4B-223ENST00000493618 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.3■□□□□ 0.36
ATG4B-223ENST00000493618 RNF180Q86T96 592 aa17.3■□□□□ 0.36
ATG4B-223ENST00000493618 TBC1D10CQ8IV04 446 aa17.3■□□□□ 0.36
ATG4B-223ENST00000493618 TRERF1Q96PN7 1200 aa17.3■□□□□ 0.36
ATG4B-223ENST00000493618 LBHD1Q9BQE6 289 aaPredicted RBP17.3■□□□□ 0.36
ATG4B-223ENST00000493618 ACAD9Q9H845 621 aa17.3■□□□□ 0.36
ATG4B-223ENST00000493618 FAM184BQ9ULE4 1060 aa17.3■□□□□ 0.36
ATG4B-223ENST00000493618 PHF24Q9UPV7 400 aa17.3■□□□□ 0.36
ATG4B-223ENST00000493618 SYNRGQ9UMZ2 1314 aa17.29■□□□□ 0.36
ATG4B-223ENST00000493618 ADCY6O43306 1168 aa17.29■□□□□ 0.36
ATG4B-223ENST00000493618 FDX1P10109 184 aa17.29■□□□□ 0.36
ATG4B-223ENST00000493618 NOVP48745 357 aa17.29■□□□□ 0.36
ATG4B-223ENST00000493618 ACVR2BQ13705 512 aa17.29■□□□□ 0.36
ATG4B-223ENST00000493618 MUM1L1Q5H9M0 696 aa17.29■□□□□ 0.36
ATG4B-223ENST00000493618 CWC27Q6UX04 472 aaKnown RBP17.29■□□□□ 0.36
ATG4B-223ENST00000493618 ARMCX2Q7L311 632 aa17.29■□□□□ 0.36
ATG4B-223ENST00000493618 SH3RF1Q7Z6J0 888 aa17.29■□□□□ 0.36
ATG4B-223ENST00000493618 ZNF467Q7Z7K2 595 aaPredicted RBP17.29■□□□□ 0.36
ATG4B-223ENST00000493618 MSL3Q8N5Y2 521 aaKnown RBP17.29■□□□□ 0.36
ATG4B-223ENST00000493618 TMEM47Q9BQJ4 181 aa17.29■□□□□ 0.36
ATG4B-223ENST00000493618 GPCPD1Q9NPB8 672 aa17.29■□□□□ 0.36
ATG4B-223ENST00000493618 A1CFQ9NQ94 594 aaKnown RBP17.29■□□□□ 0.36
ATG4B-223ENST00000493618 DDX49Q9Y6V7 483 aaKnown RBP17.29■□□□□ 0.36
ATG4B-223ENST00000493618 MYH6P13533 1939 aa17.29■□□□□ 0.36
ATG4B-223ENST00000493618 ZMYM6O95789 1325 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 NEDD4P46934 1319 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 A0A1W2PQ45 241 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-223ENST00000493618 A0A1W2PQY0 241 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 MYADML2A6NDP7 307 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 POTEB2H3BUK9 544 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 PLA2G6O60733 806 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 ADAMTS4O75173 837 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 TOP1P11387 765 aaKnown RBP17.28■□□□□ 0.36
ATG4B-223ENST00000493618 IRX6P78412 446 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-223ENST00000493618 SNX17Q15036 470 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 AKNAD1Q5T1N1 836 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 MFSD6Q6ZSS7 791 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 CCDC144CPQ8IYA2 1237 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 DCAF4Q8WV16 495 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 ZKSCAN3Q9BRR0 538 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 OSBPL3Q9H4L5 887 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 DIAPH3Q9NSV4 1193 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 CCPG1Q9ULG6 757 aa17.28■□□□□ 0.36
ATG4B-223ENST00000493618 SOWAHBA6NEL2 793 aa17.27■□□□□ 0.36
ATG4B-223ENST00000493618 TLE2Q04725 743 aa17.27■□□□□ 0.36
ATG4B-223ENST00000493618 CCDC144BQ3MJ40 725 aa17.27■□□□□ 0.36
ATG4B-223ENST00000493618 Q7L0L9 218 aa17.27■□□□□ 0.36
ATG4B-223ENST00000493618 TICAM2Q86XR7 235 aa17.27■□□□□ 0.36
ATG4B-223ENST00000493618 FAM133AQ8N9E0 248 aa17.27■□□□□ 0.36
ATG4B-223ENST00000493618 PDLIM7Q9NR12 457 aa17.27■□□□□ 0.36
ATG4B-223ENST00000493618 TRIM43BA6NCK2 446 aa17.26■□□□□ 0.35
ATG4B-223ENST00000493618 MFAP1P55081 439 aaKnown RBP17.26■□□□□ 0.35
ATG4B-223ENST00000493618 TKFCQ3LXA3 575 aa17.26■□□□□ 0.35
ATG4B-223ENST00000493618 LRIT3Q3SXY7 679 aa17.26■□□□□ 0.35
ATG4B-223ENST00000493618 SYDE2Q5VT97 1194 aa17.26■□□□□ 0.35
ATG4B-223ENST00000493618 NSMFQ6X4W1 530 aa17.26■□□□□ 0.35
ATG4B-223ENST00000493618 BADQ92934 168 aa17.26■□□□□ 0.35
ATG4B-223ENST00000493618 TRIM43Q96BQ3 446 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-223ENST00000493618 PURBQ96QR8 312 aaKnown RBP17.26■□□□□ 0.35
ATG4B-223ENST00000493618 ABHD16BQ9H3Z7 469 aa17.26■□□□□ 0.35
ATG4B-223ENST00000493618 TCP11L1Q9NUJ3 509 aa17.26■□□□□ 0.35
ATG4B-223ENST00000493618 ZNF213O14771 459 aa17.25■□□□□ 0.35
ATG4B-223ENST00000493618 PQBP1O60828 265 aaKnown RBP17.25■□□□□ 0.35
ATG4B-223ENST00000493618 DUSP11O75319 330 aaKnown RBP17.25■□□□□ 0.35
ATG4B-223ENST00000493618 C6orf222P0C671 652 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-223ENST00000493618 ACLYP53396 1101 aa17.25■□□□□ 0.35
ATG4B-223ENST00000493618 KCNA10Q16322 511 aa17.25■□□□□ 0.35
ATG4B-223ENST00000493618 KLHDC9Q8NEP7 349 aa17.25■□□□□ 0.35
ATG4B-223ENST00000493618 KATNBL1Q9H079 304 aa17.25■□□□□ 0.35
ATG4B-223ENST00000493618 RANBP17Q9H2T7 1088 aaKnown RBP17.25■□□□□ 0.35
ATG4B-223ENST00000493618 ASTN1O14525 1302 aa17.24■□□□□ 0.35
ATG4B-223ENST00000493618 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-223ENST00000493618 ICAM1P05362 532 aa17.24■□□□□ 0.35
ATG4B-223ENST00000493618 PDHBP11177 359 aa17.24■□□□□ 0.35
ATG4B-223ENST00000493618 PTGS1P23219 599 aa17.24■□□□□ 0.35
ATG4B-223ENST00000493618 PDE4AP27815 886 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms