RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 C9orf50Q5SZB4 431 aa16.04■□□□□ 0.16
TRIM50-204ENST00000493498 CCDC174Q6PII3 467 aa16.04■□□□□ 0.16
TRIM50-204ENST00000493498 ANKRD33Q7Z3H0 272 aa16.04■□□□□ 0.16
TRIM50-204ENST00000493498 GMCL1P1Q8NEA9 526 aa16.04■□□□□ 0.16
TRIM50-204ENST00000493498 FAM161BQ96MY7 647 aa16.04■□□□□ 0.16
TRIM50-204ENST00000493498 CLIP2Q9UDT6 1046 aa16.04■□□□□ 0.16
TRIM50-204ENST00000493498 LAMA2P24043 3122 aaKnown RBP16.03■□□□□ 0.16
TRIM50-204ENST00000493498 ELP1O95163 1332 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 SYNRGQ9UMZ2 1314 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 IGKV6D-41A0A0C4DH26 115 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 APPP05067 770 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 TAL1P17542 331 aaPredicted RBP16.03■□□□□ 0.16
TRIM50-204ENST00000493498 CST5P28325 142 aaPredicted RBP16.03■□□□□ 0.16
TRIM50-204ENST00000493498 FPGSQ05932 587 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 SH3RF1Q7Z6J0 888 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 ANKRD35Q8N283 1001 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 KLHDC9Q8NEP7 349 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 RUFY2Q8WXA3 655 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 OSBP2Q969R2 916 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 RNPC3Q96LT9 517 aaKnown RBP16.03■□□□□ 0.16
TRIM50-204ENST00000493498 GLT1D1Q96MS3 346 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 NUP88Q99567 741 aaPredicted RBP16.03■□□□□ 0.16
TRIM50-204ENST00000493498 SEMA6BQ9H3T3 888 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 ABHD16BQ9H3Z7 469 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 UPF2Q9HAU5 1272 aaKnown RBP16.03■□□□□ 0.16
TRIM50-204ENST00000493498 SLC38A10Q9HBR0 1119 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 TMEM39AQ9NV64 488 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 MTMR4Q9NYA4 1195 aa16.03■□□□□ 0.16
TRIM50-204ENST00000493498 ZHX1Q9UKY1 873 aaPredicted RBP16.03■□□□□ 0.16
TRIM50-204ENST00000493498 PLIN4Q96Q06 1357 aa16.02■□□□□ 0.16
TRIM50-204ENST00000493498 MCM3APO60318 1980 aa16.02■□□□□ 0.16
TRIM50-204ENST00000493498 PATL2C9JE40 543 aaKnown RBP16.02■□□□□ 0.16
TRIM50-204ENST00000493498 CPXCR1Q8N123 301 aa16.02■□□□□ 0.16
TRIM50-204ENST00000493498 KIFC2Q96AC6 838 aa16.02■□□□□ 0.16
TRIM50-204ENST00000493498 CDX2Q99626 313 aaPredicted RBP16.02■□□□□ 0.16
TRIM50-204ENST00000493498 RAD50Q92878 1312 aa16.01■□□□□ 0.15
TRIM50-204ENST00000493498 REC8O95072 547 aa16.01■□□□□ 0.15
TRIM50-204ENST00000493498 SNAI1O95863 264 aaPredicted RBP16.01■□□□□ 0.15
TRIM50-204ENST00000493498 TSPY3P0CV98 308 aa16.01■□□□□ 0.15
TRIM50-204ENST00000493498 TSPY8P0CW00 308 aa16.01■□□□□ 0.15
TRIM50-204ENST00000493498 ACVR2BQ13705 512 aa16.01■□□□□ 0.15
TRIM50-204ENST00000493498 FAM160B2Q86V87 743 aa16.01■□□□□ 0.15
TRIM50-204ENST00000493498 NEDD1Q8NHV4 660 aa16.01■□□□□ 0.15
TRIM50-204ENST00000493498 CHURC1Q8WUH1 139 aa16.01■□□□□ 0.15
TRIM50-204ENST00000493498 CEP95Q96GE4 821 aa16.01■□□□□ 0.15
TRIM50-204ENST00000493498 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.01■□□□□ 0.15
TRIM50-204ENST00000493498 RIPK3Q9Y572 518 aa16.01■□□□□ 0.15
TRIM50-204ENST00000493498 BMP3P12645 472 aa16■□□□□ 0.15
TRIM50-204ENST00000493498 SLC4A3P48751 1232 aa16■□□□□ 0.15
TRIM50-204ENST00000493498 KCNA10Q16322 511 aa16■□□□□ 0.15
TRIM50-204ENST00000493498 TKFCQ3LXA3 575 aa16■□□□□ 0.15
TRIM50-204ENST00000493498 SLFN13Q68D06 897 aa16■□□□□ 0.15
TRIM50-204ENST00000493498 IFNL3Q8IZI9 196 aa16■□□□□ 0.15
TRIM50-204ENST00000493498 STK11IPQ8N1F8 1099 aa16■□□□□ 0.15
TRIM50-204ENST00000493498 MAFAQ8NHW3 353 aaPredicted RBP16■□□□□ 0.15
TRIM50-204ENST00000493498 ESYT1Q9BSJ8 1104 aa16■□□□□ 0.15
TRIM50-204ENST00000493498 FSD1Q9BTV5 496 aa16■□□□□ 0.15
TRIM50-204ENST00000493498 RAVER2Q9HCJ3 691 aaKnown RBP16■□□□□ 0.15
TRIM50-204ENST00000493498 EPB41L4AQ9HCS5 686 aaPredicted RBP16■□□□□ 0.15
TRIM50-204ENST00000493498 A0A0U1RQG5 324 aaPredicted RBP15.99■□□□□ 0.15
TRIM50-204ENST00000493498 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.99■□□□□ 0.15
TRIM50-204ENST00000493498 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.99■□□□□ 0.15
TRIM50-204ENST00000493498 TLR3O15455 904 aaKnown RBP15.99■□□□□ 0.15
TRIM50-204ENST00000493498 SGSM2O43147 1006 aa15.99■□□□□ 0.15
TRIM50-204ENST00000493498 SEC24BO95487 1268 aa15.99■□□□□ 0.15
TRIM50-204ENST00000493498 TIMP1P01033 207 aa15.99■□□□□ 0.15
TRIM50-204ENST00000493498 C6orf222P0C671 652 aaPredicted RBP15.99■□□□□ 0.15
TRIM50-204ENST00000493498 STAT2P52630 851 aa15.99■□□□□ 0.15
TRIM50-204ENST00000493498 GJA9P57773 515 aa15.99■□□□□ 0.15
TRIM50-204ENST00000493498 FAAP100Q0VG06 881 aa15.99■□□□□ 0.15
TRIM50-204ENST00000493498 PPIGQ13427 754 aaKnown RBP eCLIP15.99■□□□□ 0.154e-6■■□□□ 12.9
TRIM50-204ENST00000493498 CCSAPQ6IQ19 270 aaPredicted RBP15.99■□□□□ 0.15
TRIM50-204ENST00000493498 GMCL1Q96IK5 515 aa15.99■□□□□ 0.15
TRIM50-204ENST00000493498 SEZ6LQ9BYH1 1024 aa15.99■□□□□ 0.15
TRIM50-204ENST00000493498 NAPBQ9H115 298 aa15.99■□□□□ 0.15
TRIM50-204ENST00000493498 UPF3AQ9H1J1 476 aaKnown RBP15.99■□□□□ 0.15
TRIM50-204ENST00000493498 ACAD9Q9H845 621 aa15.99■□□□□ 0.15
TRIM50-204ENST00000493498 DIAPH3Q9NSV4 1193 aa15.99■□□□□ 0.15
TRIM50-204ENST00000493498 ASB14A6NK59 587 aa15.98■□□□□ 0.15
TRIM50-204ENST00000493498 M0R2C6 588 aa15.98■□□□□ 0.15
TRIM50-204ENST00000493498 PLA2G6O60733 806 aa15.98■□□□□ 0.15
TRIM50-204ENST00000493498 PRDM1O75626 825 aa15.98■□□□□ 0.15
TRIM50-204ENST00000493498 FOSL2P15408 326 aa15.98■□□□□ 0.15
TRIM50-204ENST00000493498 ITGB8P26012 769 aa15.98■□□□□ 0.15
TRIM50-204ENST00000493498 NKX3-2P78367 333 aa15.98■□□□□ 0.15
TRIM50-204ENST00000493498 CCDC144BQ3MJ40 725 aa15.98■□□□□ 0.15
TRIM50-204ENST00000493498 MFSD5Q6N075 450 aa15.98■□□□□ 0.15
TRIM50-204ENST00000493498 CCDC129Q6ZRS4 1044 aa15.98■□□□□ 0.15
TRIM50-204ENST00000493498 ARMCX2Q7L311 632 aa15.98■□□□□ 0.15
TRIM50-204ENST00000493498 LRRC47Q8N1G4 583 aaKnown RBP15.98■□□□□ 0.15
TRIM50-204ENST00000493498 VTI1AQ96AJ9 217 aa15.98■□□□□ 0.15
TRIM50-204ENST00000493498 LENG1Q96BZ8 264 aaPredicted RBP15.98■□□□□ 0.15
TRIM50-204ENST00000493498 COL25A1Q9BXS0 654 aaPredicted RBP15.98■□□□□ 0.15
TRIM50-204ENST00000493498 HELLSQ9NRZ9 838 aa15.98■□□□□ 0.15
TRIM50-204ENST00000493498 ISY1Q9ULR0 285 aaKnown RBP15.98■□□□□ 0.15
TRIM50-204ENST00000493498 CABYRO75952 493 aa15.97■□□□□ 0.15
TRIM50-204ENST00000493498 ASGR1P07306 291 aa15.97■□□□□ 0.15
TRIM50-204ENST00000493498 SLC1A4P43007 532 aa15.97■□□□□ 0.15
TRIM50-204ENST00000493498 TFAP4Q01664 338 aa15.97■□□□□ 0.15
TRIM50-204ENST00000493498 PPARAQ07869 468 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms