RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 TRIM6-TRIM34B2RNG4 842 aa26.22■■□□□ 1.79
LYSMD4-208ENST00000493256 HSPD1P10809 573 aaKnown RBP26.22■■□□□ 1.79
LYSMD4-208ENST00000493256 NOVP48745 357 aa26.22■■□□□ 1.79
LYSMD4-208ENST00000493256 C1orf53Q5VUE5 145 aa26.22■■□□□ 1.79
LYSMD4-208ENST00000493256 ZHX1Q9UKY1 873 aaPredicted RBP26.22■■□□□ 1.79
LYSMD4-208ENST00000493256 PLA2G6O60733 806 aa26.21■■□□□ 1.79
LYSMD4-208ENST00000493256 ADAMTS4O75173 837 aa26.21■■□□□ 1.79
LYSMD4-208ENST00000493256 IGHDP01880 384 aa26.21■■□□□ 1.79
LYSMD4-208ENST00000493256 RCSD1Q6JBY9 416 aa26.21■■□□□ 1.79
LYSMD4-208ENST00000493256 RILPL2Q969X0 211 aa26.21■■□□□ 1.79
LYSMD4-208ENST00000493256 AGBL1Q96MI9 1066 aa26.21■■□□□ 1.79
LYSMD4-208ENST00000493256 PRDM5Q9NQX1 630 aaPredicted RBP26.21■■□□□ 1.79
LYSMD4-208ENST00000493256 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.21■■□□□ 1.79
LYSMD4-208ENST00000493256 FAM184BQ9ULE4 1060 aa26.21■■□□□ 1.79
LYSMD4-208ENST00000493256 ZMYM6O95789 1325 aa26.2■■□□□ 1.79
LYSMD4-208ENST00000493256 GPR153Q6NV75 609 aa26.2■■□□□ 1.78
LYSMD4-208ENST00000493256 ACAD9Q9H845 621 aa26.2■■□□□ 1.78
LYSMD4-208ENST00000493256 PDLIM7Q9NR12 457 aa26.2■■□□□ 1.78
LYSMD4-208ENST00000493256 TOMM22Q9NS69 142 aa26.2■■□□□ 1.78
LYSMD4-208ENST00000493256 RNF146Q9NTX7 359 aa26.2■■□□□ 1.78
LYSMD4-208ENST00000493256 MTMR7Q9Y216 660 aa26.2■■□□□ 1.78
LYSMD4-208ENST00000493256 CCDC171Q6TFL3 1326 aa26.19■■□□□ 1.78
LYSMD4-208ENST00000493256 SYNRGQ9UMZ2 1314 aa26.19■■□□□ 1.78
LYSMD4-208ENST00000493256 SNAP25P60880 206 aa26.19■■□□□ 1.78
LYSMD4-208ENST00000493256 CNTN2Q02246 1040 aa26.19■■□□□ 1.78
LYSMD4-208ENST00000493256 ACVR2BQ13705 512 aa26.19■■□□□ 1.78
LYSMD4-208ENST00000493256 RRP12Q5JTH9 1297 aaKnown RBP26.19■■□□□ 1.78
LYSMD4-208ENST00000493256 CHD1LQ86WJ1 897 aa26.19■■□□□ 1.78
LYSMD4-208ENST00000493256 PLEKHM2Q8IWE5 1019 aa26.19■■□□□ 1.78
LYSMD4-208ENST00000493256 EXOC6Q8TAG9 804 aa26.19■■□□□ 1.78
LYSMD4-208ENST00000493256 PRR12Q9ULL5 1215 aa26.19■■□□□ 1.78
LYSMD4-208ENST00000493256 A0A1W2PQ45 241 aaPredicted RBP26.18■■□□□ 1.78
LYSMD4-208ENST00000493256 A0A1W2PQY0 241 aa26.18■■□□□ 1.78
LYSMD4-208ENST00000493256 NUCB1Q02818 461 aa26.18■■□□□ 1.78
LYSMD4-208ENST00000493256 CCDC174Q6PII3 467 aa26.18■■□□□ 1.78
LYSMD4-208ENST00000493256 ARMCX2Q7L311 632 aa26.18■■□□□ 1.78
LYSMD4-208ENST00000493256 A1CFQ9NQ94 594 aaKnown RBP26.18■■□□□ 1.78
LYSMD4-208ENST00000493256 POTEB2H3BUK9 544 aa26.17■■□□□ 1.78
LYSMD4-208ENST00000493256 HAND2P61296 217 aa26.17■■□□□ 1.78
LYSMD4-208ENST00000493256 TLE2Q04725 743 aa26.17■■□□□ 1.78
LYSMD4-208ENST00000493256 CCDC96Q2M329 555 aa26.17■■□□□ 1.78
LYSMD4-208ENST00000493256 TKFCQ3LXA3 575 aa26.17■■□□□ 1.78
LYSMD4-208ENST00000493256 SH3RF1Q7Z6J0 888 aa26.17■■□□□ 1.78
LYSMD4-208ENST00000493256 FAM133AQ8N9E0 248 aa26.17■■□□□ 1.78
LYSMD4-208ENST00000493256 KLHDC9Q8NEP7 349 aa26.17■■□□□ 1.78
LYSMD4-208ENST00000493256 DCAF4Q8WV16 495 aa26.17■■□□□ 1.78
LYSMD4-208ENST00000493256 TRERF1Q96PN7 1200 aa26.17■■□□□ 1.78
LYSMD4-208ENST00000493256 TSEN34Q9BSV6 310 aaKnown RBP26.17■■□□□ 1.78
LYSMD4-208ENST00000493256 ABHD16BQ9H3Z7 469 aa26.17■■□□□ 1.78
LYSMD4-208ENST00000493256 LAMA2P24043 3122 aaKnown RBP26.16■■□□□ 1.78
LYSMD4-208ENST00000493256 TRIM43BA6NCK2 446 aa26.16■■□□□ 1.78
LYSMD4-208ENST00000493256 ADCY6O43306 1168 aa26.16■■□□□ 1.78
LYSMD4-208ENST00000493256 DUSP11O75319 330 aaKnown RBP26.16■■□□□ 1.78
LYSMD4-208ENST00000493256 ALAS1P13196 640 aa26.16■■□□□ 1.78
LYSMD4-208ENST00000493256 SDSP20132 328 aa26.16■■□□□ 1.78
LYSMD4-208ENST00000493256 Q7L0L9 218 aa26.16■■□□□ 1.78
LYSMD4-208ENST00000493256 CCDC144CPQ8IYA2 1237 aa26.16■■□□□ 1.78
LYSMD4-208ENST00000493256 DEFB123Q8N688 67 aa26.16■■□□□ 1.78
LYSMD4-208ENST00000493256 TRIM43Q96BQ3 446 aaPredicted RBP26.16■■□□□ 1.78
LYSMD4-208ENST00000493256 OSBPL3Q9H4L5 887 aa26.16■■□□□ 1.78
LYSMD4-208ENST00000493256 MYADML2A6NDP7 307 aa26.15■■□□□ 1.78
LYSMD4-208ENST00000493256 TOP1P11387 765 aaKnown RBP26.15■■□□□ 1.78
LYSMD4-208ENST00000493256 ACLYP53396 1101 aa26.15■■□□□ 1.78
LYSMD4-208ENST00000493256 CCDC144BQ3MJ40 725 aa26.15■■□□□ 1.78
LYSMD4-208ENST00000493256 CCSAPQ6IQ19 270 aaPredicted RBP26.15■■□□□ 1.78
LYSMD4-208ENST00000493256 BADQ92934 168 aa26.15■■□□□ 1.78
LYSMD4-208ENST00000493256 TMEM47Q9BQJ4 181 aa26.15■■□□□ 1.78
LYSMD4-208ENST00000493256 KATNBL1Q9H079 304 aa26.15■■□□□ 1.78
LYSMD4-208ENST00000493256 TCP11L1Q9NUJ3 509 aa26.15■■□□□ 1.78
LYSMD4-208ENST00000493256 SOWAHBA6NEL2 793 aa26.14■■□□□ 1.78
LYSMD4-208ENST00000493256 IRX5P78411 483 aaPredicted RBP26.14■■□□□ 1.78
LYSMD4-208ENST00000493256 KCNA10Q16322 511 aa26.14■■□□□ 1.78
LYSMD4-208ENST00000493256 MUM1L1Q5H9M0 696 aa26.14■■□□□ 1.78
LYSMD4-208ENST00000493256 TTBK2Q6IQ55 1244 aa26.14■■□□□ 1.78
LYSMD4-208ENST00000493256 TBC1D10CQ8IV04 446 aa26.14■■□□□ 1.78
LYSMD4-208ENST00000493256 COL6A3P12111 3177 aa26.14■■□□□ 1.77
LYSMD4-208ENST00000493256 CST5P28325 142 aaPredicted RBP26.13■■□□□ 1.77
LYSMD4-208ENST00000493256 SLC16A2P36021 539 aa26.13■■□□□ 1.77
LYSMD4-208ENST00000493256 AKNAD1Q5T1N1 836 aa26.13■■□□□ 1.77
LYSMD4-208ENST00000493256 CCPG1Q9ULG6 757 aa26.13■■□□□ 1.77
LYSMD4-208ENST00000493256 MOXD2PA6NHM9 499 aa26.12■■□□□ 1.77
LYSMD4-208ENST00000493256 PQBP1O60828 265 aaKnown RBP26.12■■□□□ 1.77
LYSMD4-208ENST00000493256 CLTBP09497 229 aa26.12■■□□□ 1.77
LYSMD4-208ENST00000493256 MFAP1P55081 439 aaKnown RBP26.12■■□□□ 1.77
LYSMD4-208ENST00000493256 BTNL9Q6UXG8 535 aa26.12■■□□□ 1.77
LYSMD4-208ENST00000493256 MFSD6Q6ZSS7 791 aa26.12■■□□□ 1.77
LYSMD4-208ENST00000493256 NUP133Q8WUM0 1156 aa26.12■■□□□ 1.77
LYSMD4-208ENST00000493256 UPF3AQ9H1J1 476 aaKnown RBP26.12■■□□□ 1.77
LYSMD4-208ENST00000493256 RANBP17Q9H2T7 1088 aaKnown RBP26.12■■□□□ 1.77
LYSMD4-208ENST00000493256 STARD7Q9NQZ5 370 aa26.12■■□□□ 1.77
LYSMD4-208ENST00000493256 CYP39A1Q9NYL5 469 aa26.12■■□□□ 1.77
LYSMD4-208ENST00000493256 ASTN1O14525 1302 aa26.12■■□□□ 1.77
LYSMD4-208ENST00000493256 FRMPD2Q68DX3 1309 aaPredicted RBP26.12■■□□□ 1.77
LYSMD4-208ENST00000493256 ICAM1P05362 532 aa26.11■■□□□ 1.77
LYSMD4-208ENST00000493256 C6orf222P0C671 652 aaPredicted RBP26.11■■□□□ 1.77
LYSMD4-208ENST00000493256 PCP11498 1178 aaKnown RBP26.11■■□□□ 1.77
LYSMD4-208ENST00000493256 ITGB8P26012 769 aa26.11■■□□□ 1.77
LYSMD4-208ENST00000493256 SYDE2Q5VT97 1194 aa26.11■■□□□ 1.77
LYSMD4-208ENST00000493256 GPCPD1Q9NPB8 672 aa26.11■■□□□ 1.77
LYSMD4-208ENST00000493256 LRRC37A2A6NM11 1700 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms