RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 CALM2P0DP24 149 aa15.62■□□□□ 0.09
MSH6-208ENST00000493177 CALM3P0DP25 149 aa15.62■□□□□ 0.09
MSH6-208ENST00000493177 PDIA3P30101 505 aaKnown RBP15.62■□□□□ 0.09
MSH6-208ENST00000493177 GJA8P48165 433 aa15.62■□□□□ 0.09
MSH6-208ENST00000493177 METAP2P50579 478 aaKnown RBP eCLIP15.62■□□□□ 0.09
MSH6-208ENST00000493177 CCT2P78371 535 aaKnown RBP15.62■□□□□ 0.09
MSH6-208ENST00000493177 ME3Q16798 604 aa15.62■□□□□ 0.09
MSH6-208ENST00000493177 SLFN13Q68D06 897 aa15.62■□□□□ 0.09
MSH6-208ENST00000493177 APOA5Q6Q788 366 aa15.62■□□□□ 0.09
MSH6-208ENST00000493177 SIAH1Q8IUQ4 282 aa15.62■□□□□ 0.09
MSH6-208ENST00000493177 U2AF1L4Q8WU68 220 aaKnown RBP15.62■□□□□ 0.09
MSH6-208ENST00000493177 MKL1Q969V6 931 aa15.62■□□□□ 0.09
MSH6-208ENST00000493177 ATG4CQ96DT6 458 aa15.62■□□□□ 0.09
MSH6-208ENST00000493177 ZNF274Q96GC6 653 aaPredicted RBP15.62■□□□□ 0.09
MSH6-208ENST00000493177 DEFB118Q96PH6 123 aa15.62■□□□□ 0.09
MSH6-208ENST00000493177 APBA2Q99767 749 aa15.62■□□□□ 0.09
MSH6-208ENST00000493177 SPATC1LQ9H0A9 340 aa15.62■□□□□ 0.09
MSH6-208ENST00000493177 HMX1Q9NP08 348 aaPredicted RBP15.62■□□□□ 0.09
MSH6-208ENST00000493177 ZNFX1Q9P2E3 1918 aaKnown RBP15.61■□□□□ 0.09
MSH6-208ENST00000493177 LARGE1O95461 756 aa15.61■□□□□ 0.09
MSH6-208ENST00000493177 MAP2K5Q13163 448 aa15.61■□□□□ 0.09
MSH6-208ENST00000493177 CCDC96Q2M329 555 aa15.61■□□□□ 0.09
MSH6-208ENST00000493177 NECAB1Q8N987 351 aa15.61■□□□□ 0.09
MSH6-208ENST00000493177 CTCFLQ8NI51 663 aaPredicted RBP15.61■□□□□ 0.09
MSH6-208ENST00000493177 TRIB2Q92519 343 aa15.61■□□□□ 0.09
MSH6-208ENST00000493177 TMX3Q96JJ7 454 aa15.61■□□□□ 0.09
MSH6-208ENST00000493177 MOV10L1Q9BXT6 1211 aaKnown RBP15.61■□□□□ 0.09
MSH6-208ENST00000493177 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.61■□□□□ 0.094e-8■■□□□ 12.3
MSH6-208ENST00000493177 SH2B1Q9NRF2 756 aaPredicted RBP15.61■□□□□ 0.09
MSH6-208ENST00000493177 SLC15A5A6NIM6 579 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 F5H6K3 240 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 PFKFB2O60825 505 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 SGPL1O95470 568 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 XRCC5P13010 732 aaKnown RBP15.6■□□□□ 0.09
MSH6-208ENST00000493177 PTPREP23469 700 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 EVCP57679 992 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 KLRC3Q07444 240 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 IKQ13123 557 aaPredicted RBP15.6■□□□□ 0.09
MSH6-208ENST00000493177 RTN1Q16799 776 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 DPP9Q86TI2 863 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 CCDC83Q8IWF9 413 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 NUP88Q99567 741 aaPredicted RBP15.6■□□□□ 0.09
MSH6-208ENST00000493177 FBXO28Q9NVF7 368 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 SLC5A4Q9NY91 659 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 DAXXQ9UER7 740 aaPredicted RBP15.6■□□□□ 0.09
MSH6-208ENST00000493177 SYNPO2Q9UMS6 1093 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 RPTORQ8N122 1335 aa15.6■□□□□ 0.09
MSH6-208ENST00000493177 PLXNA1Q9UIW2 1896 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 FARP2O94887 1054 aaPredicted RBP15.59■□□□□ 0.09
MSH6-208ENST00000493177 NDUFB10O96000 172 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 PARP1P09874 1014 aaKnown RBP15.59■□□□□ 0.09
MSH6-208ENST00000493177 PRKAR2AP13861 404 aaKnown RBP15.59■□□□□ 0.09
MSH6-208ENST00000493177 ERCC3P19447 782 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 SLC1A4P43007 532 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 SLC4A3P48751 1232 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 TROAPQ12815 778 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 TRIM32Q13049 653 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 MORN1Q5T089 497 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 PRPF38BQ5VTL8 546 aaKnown RBP15.59■□□□□ 0.09
MSH6-208ENST00000493177 MFSD14CQ5VZR4 134 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 POTEEQ6S8J3 1075 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 FANCBQ8NB91 859 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 GMCL1P1Q8NEA9 526 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 DCAF4Q8WV16 495 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 SHISA4Q96DD7 197 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 SLF1Q9BQI6 1058 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 MROH8Q9H579 483 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 NCOA5Q9HCD5 579 aaKnown RBP15.59■□□□□ 0.09
MSH6-208ENST00000493177 PPP1R9AQ9ULJ8 1098 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 FRMPD2Q68DX3 1309 aaPredicted RBP15.59■□□□□ 0.09
MSH6-208ENST00000493177 ZNF236Q9UL36 1845 aa15.59■□□□□ 0.09
MSH6-208ENST00000493177 CCDC196A0A1B0GTZ2 297 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 CPLX1O14810 134 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 SLC25A27O95847 323 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 HSP90AA1P07900 732 aaKnown RBP15.58■□□□□ 0.08
MSH6-208ENST00000493177 PDHBP11177 359 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 KIF5BP33176 963 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 RCAN1P53805 252 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 SCRN1Q12765 414 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 GRM4Q14833 912 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 CCL14Q16627 93 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 CPLX2Q6PUV4 134 aaKnown RBP15.58■□□□□ 0.08
MSH6-208ENST00000493177 RASGRP2Q7LDG7 609 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 SHCBP1Q8NEM2 672 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 DPF3Q92784 378 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 GTF3C6Q969F1 213 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 KIFC2Q96AC6 838 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 HTATIP2Q9BUP3 242 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 GPCPD1Q9NPB8 672 aa15.58■□□□□ 0.08
MSH6-208ENST00000493177 RBM28Q9NW13 759 aaKnown RBP15.58■□□□□ 0.08
MSH6-208ENST00000493177 FRMPD3Q5JV73 1810 aa15.57■□□□□ 0.08
MSH6-208ENST00000493177 STRNO43815 780 aa15.57■□□□□ 0.08
MSH6-208ENST00000493177 DHX16O60231 1041 aaKnown RBP15.57■□□□□ 0.08
MSH6-208ENST00000493177 ZBED4O75132 1171 aa15.57■□□□□ 0.08
MSH6-208ENST00000493177 GOLGA8HP0CJ92 632 aa15.57■□□□□ 0.08
MSH6-208ENST00000493177 BMP3P12645 472 aa15.57■□□□□ 0.08
MSH6-208ENST00000493177 CAPN2P17655 700 aa15.57■□□□□ 0.08
MSH6-208ENST00000493177 ADORA2AP29274 412 aa15.57■□□□□ 0.08
MSH6-208ENST00000493177 GNAQP50148 359 aa15.57■□□□□ 0.08
MSH6-208ENST00000493177 GRB14Q14449 540 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms