RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 CCDC171Q6TFL3 1326 aa20.41■□□□□ 0.86
SGMS1-204ENST00000492601 SYNGAP1Q96PV0 1343 aa20.41■□□□□ 0.86
SGMS1-204ENST00000492601 LAMA2P24043 3122 aaKnown RBP20.41■□□□□ 0.86
SGMS1-204ENST00000492601 FGRP09769 529 aa20.4■□□□□ 0.86
SGMS1-204ENST00000492601 FDX1P10109 184 aa20.4■□□□□ 0.86
SGMS1-204ENST00000492601 TRIM60Q495X7 471 aa20.4■□□□□ 0.86
SGMS1-204ENST00000492601 RCSD1Q6JBY9 416 aa20.4■□□□□ 0.86
SGMS1-204ENST00000492601 CCDC174Q6PII3 467 aa20.4■□□□□ 0.86
SGMS1-204ENST00000492601 TICAM2Q86XR7 235 aa20.4■□□□□ 0.86
SGMS1-204ENST00000492601 MSL3Q8N5Y2 521 aaKnown RBP20.4■□□□□ 0.86
SGMS1-204ENST00000492601 LBHD1Q9BQE6 289 aaPredicted RBP20.4■□□□□ 0.86
SGMS1-204ENST00000492601 PRKAG2Q9UGJ0 569 aa20.4■□□□□ 0.86
SGMS1-204ENST00000492601 ZNF536O15090 1300 aa20.39■□□□□ 0.85
SGMS1-204ENST00000492601 SDSP20132 328 aa20.39■□□□□ 0.85
SGMS1-204ENST00000492601 CCDC96Q2M329 555 aa20.39■□□□□ 0.85
SGMS1-204ENST00000492601 MAMDC4Q6UXC1 1216 aa20.39■□□□□ 0.85
SGMS1-204ENST00000492601 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.39■□□□□ 0.85
SGMS1-204ENST00000492601 RNF180Q86T96 592 aa20.39■□□□□ 0.85
SGMS1-204ENST00000492601 FGD4Q96M96 766 aa20.39■□□□□ 0.85
SGMS1-204ENST00000492601 ACAD9Q9H845 621 aa20.39■□□□□ 0.85
SGMS1-204ENST00000492601 RNF146Q9NTX7 359 aa20.39■□□□□ 0.85
SGMS1-204ENST00000492601 PHF24Q9UPV7 400 aa20.39■□□□□ 0.85
SGMS1-204ENST00000492601 ZMYM6O95789 1325 aa20.38■□□□□ 0.85
SGMS1-204ENST00000492601 ALAS1P13196 640 aa20.38■□□□□ 0.85
SGMS1-204ENST00000492601 CNTN2Q02246 1040 aa20.38■□□□□ 0.85
SGMS1-204ENST00000492601 ZNF467Q7Z7K2 595 aaPredicted RBP20.38■□□□□ 0.85
SGMS1-204ENST00000492601 PRDM5Q9NQX1 630 aaPredicted RBP20.38■□□□□ 0.85
SGMS1-204ENST00000492601 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.38■□□□□ 0.85
SGMS1-204ENST00000492601 FAM184BQ9ULE4 1060 aa20.38■□□□□ 0.85
SGMS1-204ENST00000492601 PRR12Q9ULL5 1215 aa20.38■□□□□ 0.85
SGMS1-204ENST00000492601 MYH6P13533 1939 aa20.37■□□□□ 0.85
SGMS1-204ENST00000492601 SYNRGQ9UMZ2 1314 aa20.37■□□□□ 0.85
SGMS1-204ENST00000492601 PLA2G6O60733 806 aa20.37■□□□□ 0.85
SGMS1-204ENST00000492601 NOVP48745 357 aa20.37■□□□□ 0.85
SGMS1-204ENST00000492601 ACVR2BQ13705 512 aa20.37■□□□□ 0.85
SGMS1-204ENST00000492601 SNX17Q15036 470 aa20.37■□□□□ 0.85
SGMS1-204ENST00000492601 ARMCX2Q7L311 632 aa20.37■□□□□ 0.85
SGMS1-204ENST00000492601 TRERF1Q96PN7 1200 aa20.37■□□□□ 0.85
SGMS1-204ENST00000492601 TMEM47Q9BQJ4 181 aa20.37■□□□□ 0.85
SGMS1-204ENST00000492601 OSBPL3Q9H4L5 887 aa20.37■□□□□ 0.85
SGMS1-204ENST00000492601 LRRC37A2A6NM11 1700 aa20.36■□□□□ 0.85
SGMS1-204ENST00000492601 POTEB2H3BUK9 544 aa20.36■□□□□ 0.85
SGMS1-204ENST00000492601 ADAMTS4O75173 837 aa20.36■□□□□ 0.85
SGMS1-204ENST00000492601 LRIT3Q3SXY7 679 aa20.36■□□□□ 0.85
SGMS1-204ENST00000492601 AKNAD1Q5T1N1 836 aa20.36■□□□□ 0.85
SGMS1-204ENST00000492601 TTBK2Q6IQ55 1244 aa20.36■□□□□ 0.85
SGMS1-204ENST00000492601 CWC27Q6UX04 472 aaKnown RBP20.36■□□□□ 0.85
SGMS1-204ENST00000492601 MFSD6Q6ZSS7 791 aa20.36■□□□□ 0.85
SGMS1-204ENST00000492601 TBC1D10CQ8IV04 446 aa20.36■□□□□ 0.85
SGMS1-204ENST00000492601 DCAF4Q8WV16 495 aa20.36■□□□□ 0.85
SGMS1-204ENST00000492601 A1CFQ9NQ94 594 aaKnown RBP20.36■□□□□ 0.85
SGMS1-204ENST00000492601 FRMPD2Q68DX3 1309 aaPredicted RBP20.35■□□□□ 0.85
SGMS1-204ENST00000492601 COL6A3P12111 3177 aa20.35■□□□□ 0.85
SGMS1-204ENST00000492601 A0A1W2PQ45 241 aaPredicted RBP20.35■□□□□ 0.85
SGMS1-204ENST00000492601 A0A1W2PQY0 241 aa20.35■□□□□ 0.85
SGMS1-204ENST00000492601 TOP1P11387 765 aaKnown RBP20.35■□□□□ 0.85
SGMS1-204ENST00000492601 SLC16A2P36021 539 aa20.35■□□□□ 0.85
SGMS1-204ENST00000492601 MFAP1P55081 439 aaKnown RBP20.35■□□□□ 0.85
SGMS1-204ENST00000492601 TKFCQ3LXA3 575 aa20.35■□□□□ 0.85
SGMS1-204ENST00000492601 CCDC144BQ3MJ40 725 aa20.35■□□□□ 0.85
SGMS1-204ENST00000492601 SH3RF1Q7Z6J0 888 aa20.35■□□□□ 0.85
SGMS1-204ENST00000492601 CCDC144CPQ8IYA2 1237 aa20.35■□□□□ 0.85
SGMS1-204ENST00000492601 FAM133AQ8N9E0 248 aa20.35■□□□□ 0.85
SGMS1-204ENST00000492601 ABHD16BQ9H3Z7 469 aa20.35■□□□□ 0.85
SGMS1-204ENST00000492601 GPCPD1Q9NPB8 672 aa20.35■□□□□ 0.85
SGMS1-204ENST00000492601 PDLIM7Q9NR12 457 aa20.35■□□□□ 0.85
SGMS1-204ENST00000492601 DIAPH3Q9NSV4 1193 aa20.35■□□□□ 0.85
SGMS1-204ENST00000492601 TCP11L1Q9NUJ3 509 aa20.35■□□□□ 0.85
SGMS1-204ENST00000492601 SUPT16HQ9Y5B9 1047 aaKnown RBP20.35■□□□□ 0.85
SGMS1-204ENST00000492601 MYADML2A6NDP7 307 aa20.34■□□□□ 0.85
SGMS1-204ENST00000492601 ADCY6O43306 1168 aa20.34■□□□□ 0.85
SGMS1-204ENST00000492601 IRX5P78411 483 aaPredicted RBP20.34■□□□□ 0.85
SGMS1-204ENST00000492601 TLE2Q04725 743 aa20.34■□□□□ 0.85
SGMS1-204ENST00000492601 MUM1L1Q5H9M0 696 aa20.34■□□□□ 0.85
SGMS1-204ENST00000492601 CCPG1Q9ULG6 757 aa20.34■□□□□ 0.85
SGMS1-204ENST00000492601 SOWAHBA6NEL2 793 aa20.33■□□□□ 0.85
SGMS1-204ENST00000492601 DUSP11O75319 330 aaKnown RBP20.33■□□□□ 0.85
SGMS1-204ENST00000492601 ACLYP53396 1101 aa20.33■□□□□ 0.85
SGMS1-204ENST00000492601 C1orf53Q5VUE5 145 aa20.33■□□□□ 0.85
SGMS1-204ENST00000492601 TSEN34Q9BSV6 310 aaKnown RBP20.33■□□□□ 0.85
SGMS1-204ENST00000492601 DDX49Q9Y6V7 483 aaKnown RBP20.33■□□□□ 0.85
SGMS1-204ENST00000492601 NEDD4P46934 1319 aa20.32■□□□□ 0.84
SGMS1-204ENST00000492601 TRIM43BA6NCK2 446 aa20.32■□□□□ 0.84
SGMS1-204ENST00000492601 PQBP1O60828 265 aaKnown RBP20.32■□□□□ 0.84
SGMS1-204ENST00000492601 C6orf222P0C671 652 aaPredicted RBP20.32■□□□□ 0.84
SGMS1-204ENST00000492601 KCNA10Q16322 511 aa20.32■□□□□ 0.84
SGMS1-204ENST00000492601 SYDE2Q5VT97 1194 aa20.32■□□□□ 0.84
SGMS1-204ENST00000492601 NSMFQ6X4W1 530 aa20.32■□□□□ 0.84
SGMS1-204ENST00000492601 Q7L0L9 218 aa20.32■□□□□ 0.84
SGMS1-204ENST00000492601 KLHDC9Q8NEP7 349 aa20.32■□□□□ 0.84
SGMS1-204ENST00000492601 BADQ92934 168 aa20.32■□□□□ 0.84
SGMS1-204ENST00000492601 TRIM43Q96BQ3 446 aaPredicted RBP20.32■□□□□ 0.84
SGMS1-204ENST00000492601 ZKSCAN3Q9BRR0 538 aa20.32■□□□□ 0.84
SGMS1-204ENST00000492601 KATNBL1Q9H079 304 aa20.32■□□□□ 0.84
SGMS1-204ENST00000492601 ZNF213O14771 459 aa20.31■□□□□ 0.84
SGMS1-204ENST00000492601 ICAM1P05362 532 aa20.31■□□□□ 0.84
SGMS1-204ENST00000492601 PCP11498 1178 aaKnown RBP20.31■□□□□ 0.84
SGMS1-204ENST00000492601 BTNL9Q6UXG8 535 aa20.31■□□□□ 0.84
SGMS1-204ENST00000492601 RANBP17Q9H2T7 1088 aaKnown RBP20.31■□□□□ 0.84
SGMS1-204ENST00000492601 RNF41Q9H4P4 317 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms