RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 PHF24Q9UPV7 400 aa13.04□□□□□ -0.32
TMEM39A-211ENST00000491685 A0A0D9SFI3 127 aa13.03□□□□□ -0.32
TMEM39A-211ENST00000491685 MYADML2A6NDP7 307 aa13.03□□□□□ -0.32
TMEM39A-211ENST00000491685 ATP2A1O14983 1001 aa13.03□□□□□ -0.32
TMEM39A-211ENST00000491685 EIF5BO60841 1220 aaKnown RBP13.03□□□□□ -0.32
TMEM39A-211ENST00000491685 ADAMTS4O75173 837 aa13.03□□□□□ -0.32
TMEM39A-211ENST00000491685 RARBP10826 455 aa13.03□□□□□ -0.32
TMEM39A-211ENST00000491685 ITGB8P26012 769 aa13.03□□□□□ -0.32
TMEM39A-211ENST00000491685 PDE4BQ07343 736 aa13.03□□□□□ -0.32
TMEM39A-211ENST00000491685 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
TMEM39A-211ENST00000491685 IL17RBQ9NRM6 502 aa13.03□□□□□ -0.32
TMEM39A-211ENST00000491685 HOMER2Q9NSB8 354 aa13.03□□□□□ -0.32
TMEM39A-211ENST00000491685 NRBP1Q9UHY1 535 aa13.03□□□□□ -0.32
TMEM39A-211ENST00000491685 SYNRGQ9UMZ2 1314 aa13.03□□□□□ -0.32
TMEM39A-211ENST00000491685 A0A1W2PQ45 241 aaPredicted RBP13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 A0A1W2PQY0 241 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 TRIM43BA6NCK2 446 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 TMEM232C9JQI7 657 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 ZBED4O75132 1171 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 BMP3P12645 472 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 AKR1A1P14550 325 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 SNAP25P60880 206 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 C9orf50Q5SZB4 431 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 KIAA1211Q6ZU35 1233 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 BADQ92934 168 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 TRIM43Q96BQ3 446 aaPredicted RBP13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 FAM227BQ96M60 508 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 LBHD1Q9BQE6 289 aaPredicted RBP13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 FEM1BQ9UK73 627 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 ZHX1Q9UKY1 873 aaPredicted RBP13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 ISY1Q9ULR0 285 aaKnown RBP13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 SYNPO2Q9UMS6 1093 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 DDX49Q9Y6V7 483 aaKnown RBP13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 ZNF536O15090 1300 aa13.02□□□□□ -0.33
TMEM39A-211ENST00000491685 SLC3A2P08195 630 aaKnown RBP13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 TLE2Q04725 743 aa13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 PPP4R3BQ5MIZ7 849 aa13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 CWC27Q6UX04 472 aaKnown RBP13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 MAMDC4Q6UXC1 1216 aa13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 KCTD1Q719H9 257 aa13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 ZNF589Q86UQ0 364 aaPredicted RBP13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 DDX11Q96FC9 970 aa13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 AGBL1Q96MI9 1066 aa13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 KATNBL1Q9H079 304 aa13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 CNPY2Q9Y2B0 182 aa13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 ASTN1O14525 1302 aa13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 SYNGAP1Q96PV0 1343 aa13.01□□□□□ -0.33
TMEM39A-211ENST00000491685 TSPY2A6NKD2 308 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 PTGS1P23219 599 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 MCCP23508 829 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 STAT2P52630 851 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 CNTN2Q02246 1040 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 SHHQ15465 462 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 C1orf53Q5VUE5 145 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 CCSAPQ6IQ19 270 aaPredicted RBP13□□□□□ -0.33
TMEM39A-211ENST00000491685 RNF180Q86T96 592 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 GMCL1Q96IK5 515 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 A1CFQ9NQ94 594 aaKnown RBP13□□□□□ -0.33
TMEM39A-211ENST00000491685 PRDM6Q9NQX0 595 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 PRKAG2Q9UGJ0 569 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 ANAPC4Q9UJX5 808 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 STX8Q9UNK0 236 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 MTMR7Q9Y216 660 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 CTDP1Q9Y5B0 961 aaPredicted RBP13□□□□□ -0.33
TMEM39A-211ENST00000491685 CDH23Q9H251 3354 aa13□□□□□ -0.33
TMEM39A-211ENST00000491685 SOWAHBA6NEL2 793 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 RANBP6O60518 1105 aaKnown RBP12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 PQBP1O60828 265 aaKnown RBP12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 GSPT1P15170 499 aaKnown RBP12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 SLC1A4P43007 532 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 NOVP48745 357 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 ACLYP53396 1101 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 OAZ1P54368 228 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 EPHB4P54760 987 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 NMIQ13287 307 aaPredicted RBP12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 ACVR2BQ13705 512 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 MUM1L1Q5H9M0 696 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 CCDC174Q6PII3 467 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 ARMCX2Q7L311 632 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 ZNF467Q7Z7K2 595 aaPredicted RBP12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 ANKRD35Q8N283 1001 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 MSL3Q8N5Y2 521 aaKnown RBP12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 KLHDC9Q8NEP7 349 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 CHST13Q8NET6 341 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 STAG1Q8WVM7 1258 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 RNF146Q9NTX7 359 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 CTNNA3Q9UI47 895 aa12.99□□□□□ -0.33
TMEM39A-211ENST00000491685 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 ORC4O43929 436 aa12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 CLTBP09497 229 aa12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 CHMLP26374 656 aa12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 IKQ13123 557 aaPredicted RBP12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 CCDC144BQ3MJ40 725 aa12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 ZNF697Q5TEC3 545 aa12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 TTBK2Q6IQ55 1244 aa12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 FAM160B2Q86V87 743 aa12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 CCDC144CPQ8IYA2 1237 aa12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 FAM133AQ8N9E0 248 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms