RNA–Protein interactions for RNA: ENST00000491680.6

LCLAT1-211, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,610 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-211ENST00000491680 SNW1Q13573 536 aaKnown RBP13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 RCSD1Q6JBY9 416 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 NFXL1Q6ZNB6 911 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 CCDC84Q86UT8 332 aaPredicted RBP13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 IQCA1Q86XH1 822 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 TMTC2Q8N394 836 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 SPC24Q8NBT2 197 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 ZNF296Q8WUU4 475 aaPredicted RBP13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 ANKS1AQ92625 1134 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 DNAJC18Q9H819 358 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 MKNK2Q9HBH9 465 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 AS3MTQ9HBK9 375 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 ZFYVE28Q9HCC9 887 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 IMPACTQ9P2X3 320 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 CLIP2Q9UDT6 1046 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 PTPRFP10586 1907 aa13.15□□□□□ -0.3
LCLAT1-211ENST00000491680 ERICH2A1L162 156 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 CCDC69A6NI79 296 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 TSPY2A6NKD2 308 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 BTBD19C9JJ37 291 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 KIF2AO00139 706 aaPredicted RBP13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 FKTNO75072 461 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 GDF11O95390 407 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 FDPSP14324 419 aaKnown RBP13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 RXRAP19793 462 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 METAP2P50579 478 aaKnown RBP eCLIP13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 RCAN1P53805 252 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 DGKZQ13574 1117 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 GADL1Q6ZQY3 521 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 METTL16Q86W50 562 aaKnown RBP13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 MICU3Q86XE3 530 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 ZNF654Q8IZM8 581 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 PDCL2Q8N4E4 241 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 ANKRD7Q92527 254 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 EHD4Q9H223 541 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 R3HDMLQ9H3Y0 253 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 TCP11L1Q9NUJ3 509 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 AFG3L2Q9Y4W6 797 aa13.14□□□□□ -0.31
LCLAT1-211ENST00000491680 GOLGA8AA7E2F4 631 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 USP17L5A8MUK1 530 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 BECN2A8MW95 431 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 ASNSP08243 561 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 SHMT1P34896 483 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 RRP1BQ14684 758 aaKnown RBP13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 NTRK3Q16288 839 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 NOM1Q5C9Z4 860 aaKnown RBP13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 FASTKD5Q7L8L6 764 aaKnown RBP13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 ANKRD23Q86SG2 305 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 CEP57L1Q8IYX8 460 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 NEDD1Q8NHV4 660 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 MRPS27Q92552 414 aaKnown RBP13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 DDX11Q96FC9 970 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 DNAJC25Q9H1X3 360 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 ZNF287Q9HBT7 754 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 ZCCHC17Q9NP64 241 aaKnown RBP13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 PPFIA3O75145 1194 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 KCNJ6P48051 423 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 NOVP48745 357 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 TROAPQ12815 778 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 IFIT1BQ5T764 474 aaKnown RBP13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 LRRC8AQ8IWT6 810 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 CCDC144CPQ8IYA2 1237 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 ZNF444Q8N0Y2 327 aaPredicted RBP13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 FEZ1Q99689 392 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 GINM1Q9NU53 330 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 PLIN4Q96Q06 1357 aa13.13□□□□□ -0.31
LCLAT1-211ENST00000491680 A0A0G2JLL6 359 aaPredicted RBP13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 PDHXO00330 501 aa13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 TSPY3P0CV98 308 aa13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 TSPY8P0CW00 308 aa13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 SPP2Q13103 211 aa13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 CERKLQ49MI3 558 aaPredicted RBP13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 PRRT2Q7Z6L0 340 aaPredicted RBP13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 CTU1Q7Z7A3 348 aaKnown RBP13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 DGKHQ86XP1 1220 aa13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 FMR1NBQ8N0W7 255 aaPredicted RBP13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 ZNF280CQ8ND82 737 aa13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 FBXO18Q8NFZ0 1043 aa13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 USP28Q96RU2 1077 aa13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 CABP5Q9NP86 173 aa13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 SWAP70Q9UH65 585 aa13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 ZBTB21Q9ULJ3 1066 aa13.12□□□□□ -0.31
LCLAT1-211ENST00000491680 IGKV6D-41A0A0C4DH26 115 aa13.11□□□□□ -0.31
LCLAT1-211ENST00000491680 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
LCLAT1-211ENST00000491680 DDAH1O94760 285 aa13.11□□□□□ -0.31
LCLAT1-211ENST00000491680 AKR1B1P15121 316 aa13.11□□□□□ -0.31
LCLAT1-211ENST00000491680 ME1P48163 572 aa13.11□□□□□ -0.31
LCLAT1-211ENST00000491680 TPM4P67936 248 aa13.11□□□□□ -0.31
LCLAT1-211ENST00000491680 RTN1Q16799 776 aa13.11□□□□□ -0.31
LCLAT1-211ENST00000491680 ABCB5Q2M3G0 1257 aa13.11□□□□□ -0.31
LCLAT1-211ENST00000491680 TATDN1Q6P1N9 297 aa13.11□□□□□ -0.31
LCLAT1-211ENST00000491680 SYNE3Q6ZMZ3 975 aa13.11□□□□□ -0.31
LCLAT1-211ENST00000491680 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms