RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 STK11IPQ8N1F8 1099 aa15.88■□□□□ 0.13
USF1-206ENST00000491629 PRPF38AQ8NAV1 312 aaKnown RBP15.88■□□□□ 0.13
USF1-206ENST00000491629 VWCEQ96DN2 955 aa15.88■□□□□ 0.13
USF1-206ENST00000491629 DDX11Q96FC9 970 aa15.88■□□□□ 0.13
USF1-206ENST00000491629 GLT1D1Q96MS3 346 aa15.88■□□□□ 0.13
USF1-206ENST00000491629 STRBPQ96SI9 672 aaKnown RBP15.88■□□□□ 0.13
USF1-206ENST00000491629 YBX2Q9Y2T7 364 aaKnown RBP15.88■□□□□ 0.13
USF1-206ENST00000491629 A0A0U1RQG5 324 aaPredicted RBP15.87■□□□□ 0.13
USF1-206ENST00000491629 SLC4A3P48751 1232 aa15.87■□□□□ 0.13
USF1-206ENST00000491629 NKX3-2P78367 333 aa15.87■□□□□ 0.13
USF1-206ENST00000491629 BEX3Q00994 111 aa15.87■□□□□ 0.13
USF1-206ENST00000491629 CNTN2Q02246 1040 aa15.87■□□□□ 0.13
USF1-206ENST00000491629 SBK1Q52WX2 424 aa15.87■□□□□ 0.13
USF1-206ENST00000491629 ARMCX2Q7L311 632 aa15.87■□□□□ 0.13
USF1-206ENST00000491629 RPAP2Q8IXW5 612 aaPredicted RBP15.87■□□□□ 0.13
USF1-206ENST00000491629 SLC43A3Q8NBI5 491 aa15.87■□□□□ 0.13
USF1-206ENST00000491629 PCSK9Q8NBP7 692 aaKnown RBP15.87■□□□□ 0.13
USF1-206ENST00000491629 ABHD16BQ9H3Z7 469 aa15.87■□□□□ 0.13
USF1-206ENST00000491629 SLC38A10Q9HBR0 1119 aa15.87■□□□□ 0.13
USF1-206ENST00000491629 ZBTB40Q9NUA8 1239 aa15.87■□□□□ 0.13
USF1-206ENST00000491629 DDX49Q9Y6V7 483 aaKnown RBP15.87■□□□□ 0.13
USF1-206ENST00000491629 PTPRSQ13332 1948 aa15.87■□□□□ 0.13
USF1-206ENST00000491629 GRIN2DO15399 1336 aa15.87■□□□□ 0.13
USF1-206ENST00000491629 MROH7Q68CQ1 1323 aa15.87■□□□□ 0.13
USF1-206ENST00000491629 TET1Q8NFU7 2136 aa15.86■□□□□ 0.13
USF1-206ENST00000491629 CCDC85BQ15834 202 aaPredicted RBP15.86■□□□□ 0.13
USF1-206ENST00000491629 GNASQ5JWF2 1037 aa15.86■□□□□ 0.13
USF1-206ENST00000491629 CCDC129Q6ZRS4 1044 aa15.86■□□□□ 0.13
USF1-206ENST00000491629 AMOTL1Q8IY63 956 aa15.86■□□□□ 0.13
USF1-206ENST00000491629 CCDC144CPQ8IYA2 1237 aa15.86■□□□□ 0.13
USF1-206ENST00000491629 HERVK_113Q902F9 699 aa15.86■□□□□ 0.13
USF1-206ENST00000491629 ASB2Q96Q27 587 aa15.86■□□□□ 0.13
USF1-206ENST00000491629 GAS2L1Q99501 681 aaPredicted RBP15.86■□□□□ 0.13
USF1-206ENST00000491629 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.86■□□□□ 0.134e-8■■■■■ 30.4
USF1-206ENST00000491629 EPB41L4AQ9HCS5 686 aaPredicted RBP15.86■□□□□ 0.13
USF1-206ENST00000491629 IL23AQ9NPF7 189 aa15.86■□□□□ 0.13
USF1-206ENST00000491629 ARPP21Q9UBL0 812 aaPredicted RBP15.86■□□□□ 0.13
USF1-206ENST00000491629 CLIP2Q9UDT6 1046 aa15.86■□□□□ 0.13
USF1-206ENST00000491629 BRWD1Q9NSI6 2320 aa15.86■□□□□ 0.13
USF1-206ENST00000491629 TMEM63BQ5T3F8 832 aa15.85■□□□□ 0.13
USF1-206ENST00000491629 TMEM199Q8N511 208 aa15.85■□□□□ 0.13
USF1-206ENST00000491629 ATXN2LQ8WWM7 1075 aaKnown RBP15.85■□□□□ 0.13
USF1-206ENST00000491629 MKL1Q969V6 931 aa15.85■□□□□ 0.13
USF1-206ENST00000491629 KIFC2Q96AC6 838 aa15.85■□□□□ 0.13
USF1-206ENST00000491629 VTI1AQ96AJ9 217 aa15.85■□□□□ 0.13
USF1-206ENST00000491629 NKX2-4Q9H2Z4 354 aa15.85■□□□□ 0.13
USF1-206ENST00000491629 THEGQ9P2T0 379 aa15.85■□□□□ 0.13
USF1-206ENST00000491629 TRIP12Q14669 1992 aaPredicted RBP15.85■□□□□ 0.13
USF1-206ENST00000491629 SOWAHBA6NEL2 793 aa15.84■□□□□ 0.13
USF1-206ENST00000491629 SMARCA5O60264 1052 aaPredicted RBP15.84■□□□□ 0.13
USF1-206ENST00000491629 ZBED4O75132 1171 aa15.84■□□□□ 0.13
USF1-206ENST00000491629 RAB11FIP3O75154 756 aa15.84■□□□□ 0.13
USF1-206ENST00000491629 PSRC1Q6PGN9 363 aaPredicted RBP15.84■□□□□ 0.13
USF1-206ENST00000491629 CXCL17Q6UXB2 119 aa15.84■□□□□ 0.13
USF1-206ENST00000491629 ANKRD35Q8N283 1001 aa15.84■□□□□ 0.13
USF1-206ENST00000491629 FAM133AQ8N9E0 248 aa15.84■□□□□ 0.13
USF1-206ENST00000491629 ADAMTS19Q8TE59 1207 aa15.84■□□□□ 0.13
USF1-206ENST00000491629 OSBP2Q969R2 916 aa15.84■□□□□ 0.13
USF1-206ENST00000491629 CEP95Q96GE4 821 aa15.84■□□□□ 0.13
USF1-206ENST00000491629 GNEQ9Y223 722 aaKnown RBP15.84■□□□□ 0.13
USF1-206ENST00000491629 ZNF536O15090 1300 aa15.84■□□□□ 0.13
USF1-206ENST00000491629 PRDM1O75626 825 aa15.83■□□□□ 0.12
USF1-206ENST00000491629 HNRNPUQ00839 825 aaKnown RBP eCLIP15.83■□□□□ 0.12
USF1-206ENST00000491629 CHST13Q8NET6 341 aa15.83■□□□□ 0.12
USF1-206ENST00000491629 DDRGK1Q96HY6 314 aa15.83■□□□□ 0.12
USF1-206ENST00000491629 WNT8AQ9H1J5 351 aa15.83■□□□□ 0.12
USF1-206ENST00000491629 HOMER2Q9NSB8 354 aa15.83■□□□□ 0.12
USF1-206ENST00000491629 MTMR4Q9NYA4 1195 aa15.83■□□□□ 0.12
USF1-206ENST00000491629 COG6Q9Y2V7 657 aa15.83■□□□□ 0.12
USF1-206ENST00000491629 SCN10AQ9Y5Y9 1956 aa15.82■□□□□ 0.12
USF1-206ENST00000491629 MINDY4BA8MYZ0 360 aa15.82■□□□□ 0.12
USF1-206ENST00000491629 MYOGP15173 224 aa15.82■□□□□ 0.12
USF1-206ENST00000491629 IGFBP4P22692 258 aa15.82■□□□□ 0.12
USF1-206ENST00000491629 RABGGTBP53611 331 aa15.82■□□□□ 0.12
USF1-206ENST00000491629 OTOP2Q7RTS6 562 aa15.82■□□□□ 0.12
USF1-206ENST00000491629 LRRC47Q8N1G4 583 aaKnown RBP15.82■□□□□ 0.12
USF1-206ENST00000491629 AGBL1Q96MI9 1066 aa15.82■□□□□ 0.12
USF1-206ENST00000491629 NECAB3Q96P71 396 aaPredicted RBP15.82■□□□□ 0.12
USF1-206ENST00000491629 NOC4LQ9BVI4 516 aaKnown RBP15.82■□□□□ 0.12
USF1-206ENST00000491629 TRPV6Q9H1D0 765 aa15.82■□□□□ 0.12
USF1-206ENST00000491629 MKNK2Q9HBH9 465 aa15.82■□□□□ 0.12
USF1-206ENST00000491629 PDGFCQ9NRA1 345 aa15.82■□□□□ 0.12
USF1-206ENST00000491629 FEM1BQ9UK73 627 aa15.82■□□□□ 0.12
USF1-206ENST00000491629 TLR3O15455 904 aaKnown RBP15.81■□□□□ 0.12
USF1-206ENST00000491629 HMMRO75330 724 aa15.81■□□□□ 0.12
USF1-206ENST00000491629 FGBP02675 491 aa15.81■□□□□ 0.12
USF1-206ENST00000491629 SMPD1P17405 629 aa15.81■□□□□ 0.12
USF1-206ENST00000491629 OAZ1P54368 228 aa15.81■□□□□ 0.12
USF1-206ENST00000491629 CCL23P55773 120 aa15.81■□□□□ 0.12
USF1-206ENST00000491629 MRPS5P82675 430 aaKnown RBP15.81■□□□□ 0.12
USF1-206ENST00000491629 TNFAIP2Q03169 654 aa15.81■□□□□ 0.12
USF1-206ENST00000491629 RAB30Q15771 203 aa15.81■□□□□ 0.12
USF1-206ENST00000491629 GIMAP6Q6P9H5 292 aa15.81■□□□□ 0.12
USF1-206ENST00000491629 CCDC174Q6PII3 467 aa15.81■□□□□ 0.12
USF1-206ENST00000491629 UHRF1Q96T88 793 aaPredicted RBP15.81■□□□□ 0.12
USF1-206ENST00000491629 TANC1Q9C0D5 1861 aa15.81■□□□□ 0.12
USF1-206ENST00000491629 HIPK3Q9H422 1215 aa15.81■□□□□ 0.12
USF1-206ENST00000491629 SPC25Q9HBM1 224 aa15.81■□□□□ 0.12
USF1-206ENST00000491629 A1CFQ9NQ94 594 aaKnown RBP15.81■□□□□ 0.12
USF1-206ENST00000491629 FBXO40Q9UH90 709 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms