RNA–Protein interactions for RNA: ENST00000491407.1

PPP1R35-205, Transcript of protein phosphatase 1 regulatory subunit 35, human

TSL 5

Gene PPP1R35, Length 942 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R35-205	ENST00000491407	SYNGAP1	Q96PV0	1343 aa		32.21	■■■□□ 2.75
PPP1R35-205	ENST00000491407	FOXP2	O15409	715 aa		32.2	■■■□□ 2.75
PPP1R35-205	ENST00000491407	FAM227B	Q96M60	508 aa		32.2	■■■□□ 2.75
PPP1R35-205	ENST00000491407	GLT1D1	Q96MS3	346 aa		32.2	■■■□□ 2.75
PPP1R35-205	ENST00000491407	NUP88	Q99567	741 aa	Predicted RBP	32.2	■■■□□ 2.75
PPP1R35-205	ENST00000491407	HELLS	Q9NRZ9	838 aa		32.2	■■■□□ 2.75
PPP1R35-205	ENST00000491407	TBX21	Q9UL17	535 aa		32.2	■■■□□ 2.75
PPP1R35-205	ENST00000491407	MCM3AP	O60318	1980 aa		32.19	■■■□□ 2.74
PPP1R35-205	ENST00000491407	DUSP11	O75319	330 aa	Known RBP	32.19	■■■□□ 2.74
PPP1R35-205	ENST00000491407	SLC4A3	P48751	1232 aa		32.19	■■■□□ 2.74
PPP1R35-205	ENST00000491407	CCSAP	Q6IQ19	270 aa	Predicted RBP	32.19	■■■□□ 2.74
PPP1R35-205	ENST00000491407	MAMDC4	Q6UXC1	1216 aa		32.19	■■■□□ 2.74
PPP1R35-205	ENST00000491407	GREB1L	Q9C091	1923 aa	Predicted RBP	32.19	■■■□□ 2.74
PPP1R35-205	ENST00000491407	MROH7	Q68CQ1	1323 aa		32.19	■■■□□ 2.74
PPP1R35-205	ENST00000491407		A0A0D9SFI3	127 aa		32.18	■■■□□ 2.74
PPP1R35-205	ENST00000491407	MYADML2	A6NDP7	307 aa		32.18	■■■□□ 2.74
PPP1R35-205	ENST00000491407	PRDM1	O75626	825 aa		32.18	■■■□□ 2.74
PPP1R35-205	ENST00000491407	PPIG	Q13427	754 aa	Known RBP eCLIP	32.18	■■■□□ 2.74	3e-9	■■□□□ 11.5
PPP1R35-205	ENST00000491407	VPS53	Q5VIR6	699 aa		32.18	■■■□□ 2.74
PPP1R35-205	ENST00000491407	MFSD5	Q6N075	450 aa		32.18	■■■□□ 2.74
PPP1R35-205	ENST00000491407	VTI1A	Q96AJ9	217 aa		32.18	■■■□□ 2.74
PPP1R35-205	ENST00000491407	RIPK3	Q9Y572	518 aa		32.18	■■■□□ 2.74
PPP1R35-205	ENST00000491407	TTC28	Q96AY4	2481 aa		32.17	■■■□□ 2.74
PPP1R35-205	ENST00000491407	C6orf222	P0C671	652 aa	Predicted RBP	32.17	■■■□□ 2.74
PPP1R35-205	ENST00000491407	CCDC174	Q6PII3	467 aa		32.17	■■■□□ 2.74
PPP1R35-205	ENST00000491407	ELP1	O95163	1332 aa		32.17	■■■□□ 2.74
PPP1R35-205	ENST00000491407	DNAJC25-GNG10	A0A024R161	153 aa		32.16	■■■□□ 2.74
PPP1R35-205	ENST00000491407	IRX5	P78411	483 aa	Predicted RBP	32.16	■■■□□ 2.74
PPP1R35-205	ENST00000491407	PPARA	Q07869	468 aa		32.16	■■■□□ 2.74
PPP1R35-205	ENST00000491407	NMI	Q13287	307 aa	Predicted RBP	32.16	■■■□□ 2.74
PPP1R35-205	ENST00000491407	CPXCR1	Q8N123	301 aa		32.16	■■■□□ 2.74
PPP1R35-205	ENST00000491407	PCSK9	Q8NBP7	692 aa	Known RBP	32.16	■■■□□ 2.74
PPP1R35-205	ENST00000491407	GAS2L1	Q99501	681 aa	Predicted RBP	32.16	■■■□□ 2.74
PPP1R35-205	ENST00000491407	MYO9B	Q13459	2157 aa		32.16	■■■□□ 2.74
PPP1R35-205	ENST00000491407	ASGR1	P07306	291 aa		32.15	■■■□□ 2.74
PPP1R35-205	ENST00000491407	CST5	P28325	142 aa	Predicted RBP	32.15	■■■□□ 2.74
PPP1R35-205	ENST00000491407	ACVR2B	Q13705	512 aa		32.15	■■■□□ 2.74
PPP1R35-205	ENST00000491407	MCMDC2	Q4G0Z9	681 aa		32.15	■■■□□ 2.74
PPP1R35-205	ENST00000491407	TMEM240	Q5SV17	173 aa		32.15	■■■□□ 2.74
PPP1R35-205	ENST00000491407	TICAM2	Q86XR7	235 aa		32.15	■■■□□ 2.74
PPP1R35-205	ENST00000491407	ZNF444	Q8N0Y2	327 aa	Predicted RBP	32.15	■■■□□ 2.74
PPP1R35-205	ENST00000491407	PRPF38A	Q8NAV1	312 aa	Known RBP	32.15	■■■□□ 2.74
PPP1R35-205	ENST00000491407	PPM1E	Q8WY54	764 aa		32.15	■■■□□ 2.74
PPP1R35-205	ENST00000491407	SPC25	Q9HBM1	224 aa		32.15	■■■□□ 2.74
PPP1R35-205	ENST00000491407	ZNF287	Q9HBT7	754 aa		32.15	■■■□□ 2.74
PPP1R35-205	ENST00000491407	CTDP1	Q9Y5B0	961 aa	Predicted RBP	32.15	■■■□□ 2.74
PPP1R35-205	ENST00000491407	MYH4	Q9Y623	1939 aa		32.15	■■■□□ 2.74
PPP1R35-205	ENST00000491407	CDK7	P50613	346 aa		32.14	■■■□□ 2.74
PPP1R35-205	ENST00000491407	C16orf59	Q7L2K0	433 aa		32.14	■■■□□ 2.74
PPP1R35-205	ENST00000491407	ZNF467	Q7Z7K2	595 aa	Predicted RBP	32.14	■■■□□ 2.74
PPP1R35-205	ENST00000491407	PBX4	Q9BYU1	374 aa		32.14	■■■□□ 2.74
PPP1R35-205	ENST00000491407	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	32.14	■■■□□ 2.74
PPP1R35-205	ENST00000491407	GRXCR1	A8MXD5	290 aa		32.13	■■■□□ 2.73
PPP1R35-205	ENST00000491407		F5H6K3	240 aa		32.13	■■■□□ 2.73
PPP1R35-205	ENST00000491407	TNFRSF10A	O00220	468 aa		32.13	■■■□□ 2.73
PPP1R35-205	ENST00000491407	CSF2RA	P15509	400 aa		32.13	■■■□□ 2.73
PPP1R35-205	ENST00000491407	PBX2	P40425	430 aa		32.13	■■■□□ 2.73
PPP1R35-205	ENST00000491407	KLRC3	Q07444	240 aa		32.13	■■■□□ 2.73
PPP1R35-205	ENST00000491407	TMEM199	Q8N511	208 aa		32.13	■■■□□ 2.73
PPP1R35-205	ENST00000491407	NYAP2	Q9P242	653 aa		32.13	■■■□□ 2.73
PPP1R35-205	ENST00000491407	ZBED4	O75132	1171 aa		32.12	■■■□□ 2.73
PPP1R35-205	ENST00000491407	NDUFB10	O96000	172 aa		32.12	■■■□□ 2.73
PPP1R35-205	ENST00000491407	SLC3A2	P08195	630 aa	Known RBP	32.12	■■■□□ 2.73
PPP1R35-205	ENST00000491407	SDS	P20132	328 aa		32.12	■■■□□ 2.73
PPP1R35-205	ENST00000491407	PDE4A	P27815	886 aa		32.12	■■■□□ 2.73
PPP1R35-205	ENST00000491407	PDE4B	Q07343	736 aa		32.12	■■■□□ 2.73
PPP1R35-205	ENST00000491407	ABHD16B	Q9H3Z7	469 aa		32.12	■■■□□ 2.73
PPP1R35-205	ENST00000491407		A0A0U1RQG5	324 aa	Predicted RBP	32.11	■■■□□ 2.73
PPP1R35-205	ENST00000491407	ARVCF	O00192	962 aa		32.11	■■■□□ 2.73
PPP1R35-205	ENST00000491407	ATP2A1	O14983	1001 aa		32.11	■■■□□ 2.73
PPP1R35-205	ENST00000491407	ADCY6	O43306	1168 aa		32.11	■■■□□ 2.73
PPP1R35-205	ENST00000491407	CCDC144B	Q3MJ40	725 aa		32.11	■■■□□ 2.73
PPP1R35-205	ENST00000491407	GNAS	Q5JWF2	1037 aa		32.11	■■■□□ 2.73
PPP1R35-205	ENST00000491407	ZNF589	Q86UQ0	364 aa	Predicted RBP	32.11	■■■□□ 2.73
PPP1R35-205	ENST00000491407	ANKRD35	Q8N283	1001 aa		32.11	■■■□□ 2.73
PPP1R35-205	ENST00000491407	PPP1R12C	Q9BZL4	782 aa		32.11	■■■□□ 2.73
PPP1R35-205	ENST00000491407	PRDM12	Q9H4Q4	367 aa		32.11	■■■□□ 2.73
PPP1R35-205	ENST00000491407	RAVER2	Q9HCJ3	691 aa	Known RBP	32.11	■■■□□ 2.73
PPP1R35-205	ENST00000491407	IGKV6D-41	A0A0C4DH26	115 aa		32.1	■■■□□ 2.73
PPP1R35-205	ENST00000491407	ACR	P10323	421 aa		32.1	■■■□□ 2.73
PPP1R35-205	ENST00000491407	GJA9	P57773	515 aa		32.1	■■■□□ 2.73
PPP1R35-205	ENST00000491407	CTDSPL2	Q05D32	466 aa		32.1	■■■□□ 2.73
PPP1R35-205	ENST00000491407	RASIP1	Q5U651	963 aa		32.1	■■■□□ 2.73
PPP1R35-205	ENST00000491407	ZNF365	Q70YC5	407 aa		32.1	■■■□□ 2.73
PPP1R35-205	ENST00000491407	KIFC2	Q96AC6	838 aa		32.1	■■■□□ 2.73
PPP1R35-205	ENST00000491407	UPF3A	Q9H1J1	476 aa	Known RBP	32.1	■■■□□ 2.73
PPP1R35-205	ENST00000491407	TLR3	O15455	904 aa	Known RBP	32.09	■■■□□ 2.73
PPP1R35-205	ENST00000491407	PSRC1	Q6PGN9	363 aa	Predicted RBP	32.09	■■■□□ 2.73
PPP1R35-205	ENST00000491407	INCENP	Q9NQS7	918 aa		32.09	■■■□□ 2.73
PPP1R35-205	ENST00000491407	CLIP2	Q9UDT6	1046 aa		32.09	■■■□□ 2.73
PPP1R35-205	ENST00000491407	ALX1	Q15699	326 aa		32.08	■■■□□ 2.73
PPP1R35-205	ENST00000491407	ARMCX2	Q7L311	632 aa		32.08	■■■□□ 2.73
PPP1R35-205	ENST00000491407	FAM126B	Q8IXS8	530 aa		32.08	■■■□□ 2.73
PPP1R35-205	ENST00000491407	CCDC171	Q6TFL3	1326 aa		32.07	■■■□□ 2.72
PPP1R35-205	ENST00000491407	TSPY3	P0CV98	308 aa		32.07	■■■□□ 2.72
PPP1R35-205	ENST00000491407	TSPY8	P0CW00	308 aa		32.07	■■■□□ 2.72
PPP1R35-205	ENST00000491407	TFAP4	Q01664	338 aa		32.07	■■■□□ 2.72
PPP1R35-205	ENST00000491407	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	32.07	■■■□□ 2.72
PPP1R35-205	ENST00000491407	ATXN2L	Q8WWM7	1075 aa	Known RBP	32.07	■■■□□ 2.72
PPP1R35-205	ENST00000491407	CEP95	Q96GE4	821 aa		32.07	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms