RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 PCP11498 1178 aaKnown RBP21.24■□□□□ 0.99
HMGN1-219ENST00000491183 BMP8BP34820 402 aa21.24■□□□□ 0.99
HMGN1-219ENST00000491183 ZNF467Q7Z7K2 595 aaPredicted RBP21.24■□□□□ 0.99
HMGN1-219ENST00000491183 DCAF4Q8WV16 495 aa21.24■□□□□ 0.99
HMGN1-219ENST00000491183 HOMER2Q9NSB8 354 aa21.24■□□□□ 0.99
HMGN1-219ENST00000491183 SYNGAP1Q96PV0 1343 aa21.24■□□□□ 0.99
HMGN1-219ENST00000491183 KBTBD13C9JR72 458 aa21.23■□□□□ 0.99
HMGN1-219ENST00000491183 ZNF213O14771 459 aa21.23■□□□□ 0.99
HMGN1-219ENST00000491183 MYCNP04198 464 aaPredicted RBP21.23■□□□□ 0.99
HMGN1-219ENST00000491183 GSPT1P15170 499 aaKnown RBP21.23■□□□□ 0.99
HMGN1-219ENST00000491183 MAGEA10P43363 369 aaPredicted RBP21.23■□□□□ 0.99
HMGN1-219ENST00000491183 CCDC174Q6PII3 467 aa21.23■□□□□ 0.99
HMGN1-219ENST00000491183 TTC14Q96N46 770 aa21.23■□□□□ 0.99
HMGN1-219ENST00000491183 IL25Q9H293 177 aa21.23■□□□□ 0.99
HMGN1-219ENST00000491183 XPNPEP3Q9NQH7 507 aa21.23■□□□□ 0.99
HMGN1-219ENST00000491183 NEDD4P46934 1319 aa21.23■□□□□ 0.99
HMGN1-219ENST00000491183 A0A1W2PPC1 479 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 PGK1P00558 417 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 RARBP10826 455 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 SLC16A2P36021 539 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 ADCYAP1R1P41586 468 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 CNTN2Q02246 1040 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 CCDC96Q2M329 555 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 BTNL9Q6UXG8 535 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 SLC39A5Q6ZMH5 540 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 LENG1Q96BZ8 264 aaPredicted RBP21.22■□□□□ 0.99
HMGN1-219ENST00000491183 TRERF1Q96PN7 1200 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 DSCC1Q9BVC3 393 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 RNF41Q9H4P4 317 aaPredicted RBP21.22■□□□□ 0.99
HMGN1-219ENST00000491183 ACAD9Q9H845 621 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 RNF146Q9NTX7 359 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 CNPY2Q9Y2B0 182 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 MCM3APO60318 1980 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 LAMA4Q16363 1823 aa21.22■□□□□ 0.99
HMGN1-219ENST00000491183 ALAS1P13196 640 aa21.21■□□□□ 0.99
HMGN1-219ENST00000491183 AKR1A1P14550 325 aa21.21■□□□□ 0.99
HMGN1-219ENST00000491183 TKFCQ3LXA3 575 aa21.21■□□□□ 0.99
HMGN1-219ENST00000491183 MUM1L1Q5H9M0 696 aa21.21■□□□□ 0.99
HMGN1-219ENST00000491183 TTC22Q5TAA0 569 aa21.21■□□□□ 0.99
HMGN1-219ENST00000491183 FAM133AQ8N9E0 248 aa21.21■□□□□ 0.99
HMGN1-219ENST00000491183 ZKSCAN3Q9BRR0 538 aa21.21■□□□□ 0.99
HMGN1-219ENST00000491183 GPCPD1Q9NPB8 672 aa21.21■□□□□ 0.99
HMGN1-219ENST00000491183 A1CFQ9NQ94 594 aaKnown RBP21.21■□□□□ 0.99
HMGN1-219ENST00000491183 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.21■□□□□ 0.99
HMGN1-219ENST00000491183 FRMPD2Q68DX3 1309 aaPredicted RBP21.21■□□□□ 0.99
HMGN1-219ENST00000491183 SOWAHBA6NEL2 793 aa21.2■□□□□ 0.98
HMGN1-219ENST00000491183 PDHBP11177 359 aa21.2■□□□□ 0.98
HMGN1-219ENST00000491183 RTP1P59025 263 aa21.2■□□□□ 0.98
HMGN1-219ENST00000491183 ESR2Q92731 530 aa21.2■□□□□ 0.98
HMGN1-219ENST00000491183 FERMT2Q96AC1 680 aa21.2■□□□□ 0.98
HMGN1-219ENST00000491183 RANBP17Q9H2T7 1088 aaKnown RBP21.2■□□□□ 0.98
HMGN1-219ENST00000491183 FAM184BQ9ULE4 1060 aa21.2■□□□□ 0.98
HMGN1-219ENST00000491183 PHF24Q9UPV7 400 aa21.2■□□□□ 0.98
HMGN1-219ENST00000491183 DNAH12Q6ZR08 3092 aa21.19■□□□□ 0.98
HMGN1-219ENST00000491183 POTEB2H3BUK9 544 aa21.19■□□□□ 0.98
HMGN1-219ENST00000491183 ADAMTS4O75173 837 aa21.19■□□□□ 0.98
HMGN1-219ENST00000491183 ACVR2BQ13705 512 aa21.19■□□□□ 0.98
HMGN1-219ENST00000491183 SYDE2Q5VT97 1194 aa21.19■□□□□ 0.98
HMGN1-219ENST00000491183 ZHX1Q9UKY1 873 aaPredicted RBP21.19■□□□□ 0.98
HMGN1-219ENST00000491183 SOX1O00570 391 aaPredicted RBP21.18■□□□□ 0.98
HMGN1-219ENST00000491183 ICAM1P05362 532 aa21.18■□□□□ 0.98
HMGN1-219ENST00000491183 SNHG28P0DPA3 235 aa21.18■□□□□ 0.98
HMGN1-219ENST00000491183 SNX17Q15036 470 aa21.18■□□□□ 0.98
HMGN1-219ENST00000491183 ARMCX2Q7L311 632 aa21.18■□□□□ 0.98
HMGN1-219ENST00000491183 RNF180Q86T96 592 aa21.18■□□□□ 0.98
HMGN1-219ENST00000491183 CCDC144CPQ8IYA2 1237 aa21.18■□□□□ 0.98
HMGN1-219ENST00000491183 KATNBL1Q9H079 304 aa21.18■□□□□ 0.98
HMGN1-219ENST00000491183 ABHD16BQ9H3Z7 469 aa21.18■□□□□ 0.98
HMGN1-219ENST00000491183 CCPG1Q9ULG6 757 aa21.18■□□□□ 0.98
HMGN1-219ENST00000491183 ATP11BQ9Y2G3 1177 aa21.18■□□□□ 0.98
HMGN1-219ENST00000491183 B4E1Z4 1266 aa21.17■□□□□ 0.98
HMGN1-219ENST00000491183 ADCY6O43306 1168 aa21.17■□□□□ 0.98
HMGN1-219ENST00000491183 KDM4AO75164 1064 aa21.17■□□□□ 0.98
HMGN1-219ENST00000491183 MDM2Q00987 491 aaPredicted RBP21.17■□□□□ 0.98
HMGN1-219ENST00000491183 ZNF543Q08ER8 600 aa21.17■□□□□ 0.98
HMGN1-219ENST00000491183 DGKHQ86XP1 1220 aa21.17■□□□□ 0.98
HMGN1-219ENST00000491183 ZSWIM5Q9P217 1185 aa21.17■□□□□ 0.98
HMGN1-219ENST00000491183 ASTN1O14525 1302 aa21.17■□□□□ 0.98
HMGN1-219ENST00000491183 SYNRGQ9UMZ2 1314 aa21.17■□□□□ 0.98
HMGN1-219ENST00000491183 DUSP11O75319 330 aaKnown RBP21.16■□□□□ 0.98
HMGN1-219ENST00000491183 IRX5P78411 483 aaPredicted RBP21.16■□□□□ 0.98
HMGN1-219ENST00000491183 IMMTQ16891 758 aaKnown RBP21.16■□□□□ 0.98
HMGN1-219ENST00000491183 CCDC144BQ3MJ40 725 aa21.16■□□□□ 0.98
HMGN1-219ENST00000491183 TRIM60Q495X7 471 aa21.16■□□□□ 0.98
HMGN1-219ENST00000491183 KLHDC9Q8NEP7 349 aa21.16■□□□□ 0.98
HMGN1-219ENST00000491183 ANKS1AQ92625 1134 aa21.16■□□□□ 0.98
HMGN1-219ENST00000491183 CYP39A1Q9NYL5 469 aa21.16■□□□□ 0.98
HMGN1-219ENST00000491183 CTNNA3Q9UI47 895 aa21.16■□□□□ 0.98
HMGN1-219ENST00000491183 DDX49Q9Y6V7 483 aaKnown RBP21.16■□□□□ 0.98
HMGN1-219ENST00000491183 NT5C2P49902 561 aa21.15■□□□□ 0.98
HMGN1-219ENST00000491183 C1orf53Q5VUE5 145 aa21.15■□□□□ 0.98
HMGN1-219ENST00000491183 CCSAPQ6IQ19 270 aaPredicted RBP21.15■□□□□ 0.98
HMGN1-219ENST00000491183 PURBQ96QR8 312 aaKnown RBP21.15■□□□□ 0.98
HMGN1-219ENST00000491183 UBE2OQ9C0C9 1292 aaKnown RBP21.15■□□□□ 0.98
HMGN1-219ENST00000491183 LCTP09848 1927 aa21.15■□□□□ 0.98
HMGN1-219ENST00000491183 A0A1W2PQ45 241 aaPredicted RBP21.14■□□□□ 0.97
HMGN1-219ENST00000491183 A0A1W2PQY0 241 aa21.14■□□□□ 0.97
HMGN1-219ENST00000491183 MYADML2A6NDP7 307 aa21.14■□□□□ 0.97
HMGN1-219ENST00000491183 GOLGA8HP0CJ92 632 aa21.14■□□□□ 0.97
HMGN1-219ENST00000491183 CHMLP26374 656 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms