RNA–Protein interactions for RNA: ENST00000491162.1

CLCN2-209, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 4

Gene CLCN2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-209ENST00000491162 MAMDC4Q6UXC1 1216 aa13.57□□□□□ -0.24
CLCN2-209ENST00000491162 KCTD1Q719H9 257 aa13.57□□□□□ -0.24
CLCN2-209ENST00000491162 RNF180Q86T96 592 aa13.57□□□□□ -0.24
CLCN2-209ENST00000491162 GMCL1P1Q8NEA9 526 aa13.57□□□□□ -0.24
CLCN2-209ENST00000491162 KLHDC9Q8NEP7 349 aa13.57□□□□□ -0.24
CLCN2-209ENST00000491162 KATNBL1Q9H079 304 aa13.57□□□□□ -0.24
CLCN2-209ENST00000491162 NAPBQ9H115 298 aa13.57□□□□□ -0.24
CLCN2-209ENST00000491162 TTYH1Q9H313 450 aaPredicted RBP13.57□□□□□ -0.24
CLCN2-209ENST00000491162 FEM1BQ9UK73 627 aa13.57□□□□□ -0.24
CLCN2-209ENST00000491162 SYNGAP1Q96PV0 1343 aa13.57□□□□□ -0.24
CLCN2-209ENST00000491162 SOWAHBA6NEL2 793 aa13.56□□□□□ -0.24
CLCN2-209ENST00000491162 CTAGE5O15320 804 aa13.56□□□□□ -0.24
CLCN2-209ENST00000491162 COPB2P35606 906 aa13.56□□□□□ -0.24
CLCN2-209ENST00000491162 ACVR2BQ13705 512 aa13.56□□□□□ -0.24
CLCN2-209ENST00000491162 CCDC144BQ3MJ40 725 aa13.56□□□□□ -0.24
CLCN2-209ENST00000491162 MUM1L1Q5H9M0 696 aa13.56□□□□□ -0.24
CLCN2-209ENST00000491162 FAM109BQ6ICB4 259 aaPredicted RBP13.56□□□□□ -0.24
CLCN2-209ENST00000491162 CCDC174Q6PII3 467 aa13.56□□□□□ -0.24
CLCN2-209ENST00000491162 ARMCX2Q7L311 632 aa13.56□□□□□ -0.24
CLCN2-209ENST00000491162 CCDC144CPQ8IYA2 1237 aa13.56□□□□□ -0.24
CLCN2-209ENST00000491162 ANKRD35Q8N283 1001 aa13.56□□□□□ -0.24
CLCN2-209ENST00000491162 FAM184BQ9ULE4 1060 aa13.56□□□□□ -0.24
CLCN2-209ENST00000491162 CTDP1Q9Y5B0 961 aaPredicted RBP13.56□□□□□ -0.24
CLCN2-209ENST00000491162 RBAK-RBAKDNI3L0D1 243 aa13.55□□□□□ -0.24
CLCN2-209ENST00000491162 KIAA0355O15063 1070 aa13.55□□□□□ -0.24
CLCN2-209ENST00000491162 C6orf222P0C671 652 aaPredicted RBP13.55□□□□□ -0.24
CLCN2-209ENST00000491162 RRP1P56182 461 aaKnown RBP13.55□□□□□ -0.24
CLCN2-209ENST00000491162 BEX3Q00994 111 aa13.55□□□□□ -0.24
CLCN2-209ENST00000491162 ZNF697Q5TEC3 545 aa13.55□□□□□ -0.24
CLCN2-209ENST00000491162 TTBK2Q6IQ55 1244 aa13.55□□□□□ -0.24
CLCN2-209ENST00000491162 MYLIPQ8WY64 445 aa13.55□□□□□ -0.24
CLCN2-209ENST00000491162 FAM227BQ96M60 508 aa13.55□□□□□ -0.24
CLCN2-209ENST00000491162 CDX2Q99626 313 aaPredicted RBP13.55□□□□□ -0.24
CLCN2-209ENST00000491162 A1CFQ9NQ94 594 aaKnown RBP13.55□□□□□ -0.24
CLCN2-209ENST00000491162 STARD7Q9NQZ5 370 aa13.55□□□□□ -0.24
CLCN2-209ENST00000491162 RNF146Q9NTX7 359 aa13.55□□□□□ -0.24
CLCN2-209ENST00000491162 LAMA4Q16363 1823 aa13.55□□□□□ -0.24
CLCN2-209ENST00000491162 A0A0D9SFI3 127 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 ERC2O15083 957 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 DUSP11O75319 330 aaKnown RBP13.54□□□□□ -0.24
CLCN2-209ENST00000491162 ASGR1P07306 291 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 ALAS1P13196 640 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 RAG1P15918 1043 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 SLC1A4P43007 532 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 STAT2P52630 851 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 PDE4BQ07343 736 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 IKQ13123 557 aaPredicted RBP13.54□□□□□ -0.24
CLCN2-209ENST00000491162 ANKRD45Q5TZF3 282 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLCN2-209ENST00000491162 FAM133AQ8N9E0 248 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 NACAP1Q9BZK3 213 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 SEMA6BQ9H3T3 888 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 PDGFCQ9NRA1 345 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 TMEM39AQ9NV64 488 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 STX8Q9UNK0 236 aa13.54□□□□□ -0.24
CLCN2-209ENST00000491162 SCN5AQ14524 2016 aa13.53□□□□□ -0.24
CLCN2-209ENST00000491162 TSPY2A6NKD2 308 aa13.53□□□□□ -0.24
CLCN2-209ENST00000491162 SLC16A2P36021 539 aa13.53□□□□□ -0.24
CLCN2-209ENST00000491162 EEPD1Q7L9B9 569 aa13.53□□□□□ -0.24
CLCN2-209ENST00000491162 ANKRD33Q7Z3H0 272 aa13.53□□□□□ -0.24
CLCN2-209ENST00000491162 ZNF467Q7Z7K2 595 aaPredicted RBP13.53□□□□□ -0.24
CLCN2-209ENST00000491162 ZNF589Q86UQ0 364 aaPredicted RBP13.53□□□□□ -0.24
CLCN2-209ENST00000491162 MSL3Q8N5Y2 521 aaKnown RBP13.53□□□□□ -0.24
CLCN2-209ENST00000491162 CHST13Q8NET6 341 aa13.53□□□□□ -0.24
CLCN2-209ENST00000491162 STAG1Q8WVM7 1258 aa13.53□□□□□ -0.24
CLCN2-209ENST00000491162 RNPC3Q96LT9 517 aaKnown RBP13.53□□□□□ -0.24
CLCN2-209ENST00000491162 TSEN34Q9BSV6 310 aaKnown RBP13.53□□□□□ -0.24
CLCN2-209ENST00000491162 UPF3AQ9H1J1 476 aaKnown RBP13.53□□□□□ -0.24
CLCN2-209ENST00000491162 ACAD9Q9H845 621 aa13.53□□□□□ -0.24
CLCN2-209ENST00000491162 ZNF287Q9HBT7 754 aa13.53□□□□□ -0.24
CLCN2-209ENST00000491162 TBX21Q9UL17 535 aa13.53□□□□□ -0.24
CLCN2-209ENST00000491162 PRR12Q9ULL5 1215 aa13.53□□□□□ -0.24
CLCN2-209ENST00000491162 A0A0C4DFX4 3053 aa13.52□□□□□ -0.24
CLCN2-209ENST00000491162 PRUNE2Q8WUY3 3088 aa13.52□□□□□ -0.24
CLCN2-209ENST00000491162 GRXCR1A8MXD5 290 aa13.52□□□□□ -0.25
CLCN2-209ENST00000491162 RANBP6O60518 1105 aaKnown RBP13.52□□□□□ -0.25
CLCN2-209ENST00000491162 CST5P28325 142 aaPredicted RBP13.52□□□□□ -0.25
CLCN2-209ENST00000491162 OAZ1P54368 228 aa13.52□□□□□ -0.25
CLCN2-209ENST00000491162 GJA9P57773 515 aa13.52□□□□□ -0.25
CLCN2-209ENST00000491162 FPGSQ05932 587 aa13.52□□□□□ -0.25
CLCN2-209ENST00000491162 C16orf59Q7L2K0 433 aa13.52□□□□□ -0.25
CLCN2-209ENST00000491162 FBXO16Q8IX29 292 aaPredicted RBP13.52□□□□□ -0.25
CLCN2-209ENST00000491162 GMCL1Q96IK5 515 aa13.52□□□□□ -0.25
CLCN2-209ENST00000491162 TRERF1Q96PN7 1200 aa13.52□□□□□ -0.25
CLCN2-209ENST00000491162 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.52□□□□□ -0.255e-7■■■□□ 18.9
CLCN2-209ENST00000491162 COL25A1Q9BXS0 654 aaPredicted RBP13.52□□□□□ -0.25
CLCN2-209ENST00000491162 PPP1R12CQ9BZL4 782 aa13.52□□□□□ -0.25
CLCN2-209ENST00000491162 ABHD16BQ9H3Z7 469 aa13.52□□□□□ -0.25
CLCN2-209ENST00000491162 FRMPD2Q68DX3 1309 aaPredicted RBP13.52□□□□□ -0.25
CLCN2-209ENST00000491162 MYH6P13533 1939 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 UMODL1Q5DID0 1318 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 MOXD2PA6NHM9 499 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 ACRP10323 421 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 CDK7P50613 346 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 PDE1AP54750 535 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 HAND2P61296 217 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 SMAD3P84022 425 aaKnown RBP13.51□□□□□ -0.25
CLCN2-209ENST00000491162 CCDC96Q2M329 555 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 RRP12Q5JTH9 1297 aaKnown RBP13.51□□□□□ -0.25
CLCN2-209ENST00000491162 GNASQ5JWF2 1037 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms