RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 ZNF536O15090 1300 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 SCN10AQ9Y5Y9 1956 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 MOXD2PA6NHM9 499 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 MINDY4BA8MYZ0 360 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 IRX6P78412 446 aaPredicted RBP10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 CNTN2Q02246 1040 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 KCNA10Q16322 511 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 RASIP1Q5U651 963 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 ZSCAN25Q6NSZ9 544 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 GIMAP6Q6P9H5 292 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 C16orf59Q7L2K0 433 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 ARMCX2Q7L311 632 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 ZNF467Q7Z7K2 595 aaPredicted RBP10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 FAM126BQ8IXS8 530 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 MSL3Q8N5Y2 521 aaKnown RBP10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 GMCL1P1Q8NEA9 526 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 OTUD7AQ8TE49 926 aaPredicted RBP10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 KIFC2Q96AC6 838 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 DDRGK1Q96HY6 314 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 TOX2Q96NM4 488 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 SEC62Q99442 399 aaKnown RBP10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 TSEN34Q9BSV6 310 aaKnown RBP10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 HOMER2Q9NSB8 354 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 TMEM39AQ9NV64 488 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 CLIP2Q9UDT6 1046 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 UMODL1Q5DID0 1318 aa10.07□□□□□ -0.8
PCOLCE-209ENST00000490909 DUSP11O75319 330 aaKnown RBP10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 ASGR1P07306 291 aa10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 C6orf222P0C671 652 aaPredicted RBP10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 PBX2P40425 430 aa10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 TDO2P48775 406 aa10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 CDK7P50613 346 aa10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 GJA9P57773 515 aa10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 ACVR2BQ13705 512 aa10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 CCDC144BQ3MJ40 725 aa10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 CCDC144CPQ8IYA2 1237 aa10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 FAM133AQ8N9E0 248 aa10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 PRPF38AQ8NAV1 312 aaKnown RBP10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 PI4K2BQ8TCG2 481 aa10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 A1CFQ9NQ94 594 aaKnown RBP10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 PRDM6Q9NQX0 595 aa10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 MTMR4Q9NYA4 1195 aa10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 ZBTB47Q9UFB7 747 aaPredicted RBP10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 FAM184BQ9ULE4 1060 aa10.06□□□□□ -0.8
PCOLCE-209ENST00000490909 GRXCR1A8MXD5 290 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 RNF113AO15541 343 aaKnown RBP10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 TIMP1P01033 207 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 CSF2RAP15509 400 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 SLC4A3P48751 1232 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 OAZ1P54368 228 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 BEX3Q00994 111 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 TMEM240Q5SV17 173 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 TMEM63BQ5T3F8 832 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 SMC5Q8IY18 1101 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 MKL1Q969V6 931 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 VWCEQ96DN2 955 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 DDX11Q96FC9 970 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 PBX4Q9BYU1 374 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 PPP1R12CQ9BZL4 782 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 MKNK2Q9HBH9 465 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 PPP4R2Q9NY27 417 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 SYNPO2Q9UMS6 1093 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 ELP1O95163 1332 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 SALL3Q9BXA9 1300 aa10.05□□□□□ -0.8
PCOLCE-209ENST00000490909 TET1Q8NFU7 2136 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 BRWD1Q9NSI6 2320 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 A0A0U1RQG5 324 aaPredicted RBP10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 SOWAHBA6NEL2 793 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 DCDC2CA8MYV0 355 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 NMT2O60551 498 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 TTLL1O95922 423 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 CD4P01730 458 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 ACRP10323 421 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 NKX3-2P78367 333 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 MFSD5Q6N075 450 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 IFNL3Q8IZI9 196 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 ANKRD35Q8N283 1001 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 CHST13Q8NET6 341 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 NEDD1Q8NHV4 660 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 NUP133Q8WUM0 1156 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 CHMP4CQ96CF2 233 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 TIFAQ96CG3 184 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 GLT1D1Q96MS3 346 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 ABHD16BQ9H3Z7 469 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 RNF146Q9NTX7 359 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 CXXC1Q9P0U4 656 aaPredicted RBP10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 FEM1BQ9UK73 627 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 GNEQ9Y223 722 aaKnown RBP10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 GRIN2DO15399 1336 aa10.04□□□□□ -0.8
PCOLCE-209ENST00000490909 MYH6P13533 1939 aa10.03□□□□□ -0.8
PCOLCE-209ENST00000490909 TMEM232C9JQI7 657 aa10.03□□□□□ -0.8
PCOLCE-209ENST00000490909 ARVCFO00192 962 aa10.03□□□□□ -0.8
PCOLCE-209ENST00000490909 ZBED4O75132 1171 aa10.03□□□□□ -0.8
PCOLCE-209ENST00000490909 BMP3P12645 472 aa10.03□□□□□ -0.8
PCOLCE-209ENST00000490909 STAT2P52630 851 aa10.03□□□□□ -0.8
PCOLCE-209ENST00000490909 SNAP25P60880 206 aa10.03□□□□□ -0.8
PCOLCE-209ENST00000490909 PPARAQ07869 468 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms