RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 UPF3AQ9H1J1 476 aaKnown RBP18.55■□□□□ 0.56
COL2A1-207ENST00000490609 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.55■□□□□ 0.56
COL2A1-207ENST00000490609 FEM1BQ9UK73 627 aa18.55■□□□□ 0.56
COL2A1-207ENST00000490609 FAM184BQ9ULE4 1060 aa18.55■□□□□ 0.56
COL2A1-207ENST00000490609 SYNPO2Q9UMS6 1093 aa18.55■□□□□ 0.56
COL2A1-207ENST00000490609 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.55■□□□□ 0.56
COL2A1-207ENST00000490609 DDX49Q9Y6V7 483 aaKnown RBP18.55■□□□□ 0.56
COL2A1-207ENST00000490609 TTC41PQ6P2S7 1318 aa18.54■□□□□ 0.56
COL2A1-207ENST00000490609 APPP05067 770 aa18.54■□□□□ 0.56
COL2A1-207ENST00000490609 PTGS1P23219 599 aa18.54■□□□□ 0.56
COL2A1-207ENST00000490609 CST5P28325 142 aaPredicted RBP18.54■□□□□ 0.56
COL2A1-207ENST00000490609 SLC4A3P48751 1232 aa18.54■□□□□ 0.56
COL2A1-207ENST00000490609 NKX3-2P78367 333 aa18.54■□□□□ 0.56
COL2A1-207ENST00000490609 TFAP4Q01664 338 aa18.54■□□□□ 0.56
COL2A1-207ENST00000490609 CCDC144BQ3MJ40 725 aa18.54■□□□□ 0.56
COL2A1-207ENST00000490609 ZNF697Q5TEC3 545 aa18.54■□□□□ 0.56
COL2A1-207ENST00000490609 SLFN13Q68D06 897 aa18.54■□□□□ 0.56
COL2A1-207ENST00000490609 FAM133AQ8N9E0 248 aa18.54■□□□□ 0.56
COL2A1-207ENST00000490609 ZHX1Q9UKY1 873 aaPredicted RBP18.54■□□□□ 0.56
COL2A1-207ENST00000490609 TBX21Q9UL17 535 aa18.54■□□□□ 0.56
COL2A1-207ENST00000490609 SOWAHBA6NEL2 793 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 NMT2O60551 498 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 BMP3P12645 472 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 NOVP48745 357 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 OAZ1P54368 228 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 GJA9P57773 515 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 PPARAQ07869 468 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 CCDC129Q6ZRS4 1044 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 ARMCX2Q7L311 632 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.53■□□□□ 0.56
COL2A1-207ENST00000490609 CCDC144CPQ8IYA2 1237 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 CHST13Q8NET6 341 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 CHMP4CQ96CF2 233 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 AGBL1Q96MI9 1066 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 TMEM39AQ9NV64 488 aa18.53■□□□□ 0.56
COL2A1-207ENST00000490609 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.52■□□□□ 0.56
COL2A1-207ENST00000490609 MOXD2PA6NHM9 499 aa18.52■□□□□ 0.56
COL2A1-207ENST00000490609 TMEM232C9JQI7 657 aa18.52■□□□□ 0.56
COL2A1-207ENST00000490609 ASGR1P07306 291 aa18.52■□□□□ 0.56
COL2A1-207ENST00000490609 TMEM63BQ5T3F8 832 aa18.52■□□□□ 0.56
COL2A1-207ENST00000490609 MYLIPQ8WY64 445 aa18.52■□□□□ 0.56
COL2A1-207ENST00000490609 GPATCH3Q96I76 525 aa18.52■□□□□ 0.56
COL2A1-207ENST00000490609 ABHD16BQ9H3Z7 469 aa18.52■□□□□ 0.56
COL2A1-207ENST00000490609 STARD7Q9NQZ5 370 aa18.52■□□□□ 0.56
COL2A1-207ENST00000490609 TIMP1P01033 207 aa18.51■□□□□ 0.55
COL2A1-207ENST00000490609 RAG1P15918 1043 aa18.51■□□□□ 0.55
COL2A1-207ENST00000490609 MCCP23508 829 aa18.51■□□□□ 0.55
COL2A1-207ENST00000490609 SNAP25P60880 206 aa18.51■□□□□ 0.55
COL2A1-207ENST00000490609 CTDSPL2Q05D32 466 aa18.51■□□□□ 0.55
COL2A1-207ENST00000490609 VPS53Q5VIR6 699 aa18.51■□□□□ 0.55
COL2A1-207ENST00000490609 ANKRD35Q8N283 1001 aa18.51■□□□□ 0.55
COL2A1-207ENST00000490609 GMCL1Q96IK5 515 aa18.51■□□□□ 0.55
COL2A1-207ENST00000490609 A1CFQ9NQ94 594 aaKnown RBP18.51■□□□□ 0.55
COL2A1-207ENST00000490609 HOMER2Q9NSB8 354 aa18.51■□□□□ 0.55
COL2A1-207ENST00000490609 XIRP2A4UGR9 3374 aa18.51■□□□□ 0.55
COL2A1-207ENST00000490609 ELP1O95163 1332 aa18.5■□□□□ 0.55
COL2A1-207ENST00000490609 TSPY3P0CV98 308 aa18.5■□□□□ 0.55
COL2A1-207ENST00000490609 TSPY8P0CW00 308 aa18.5■□□□□ 0.55
COL2A1-207ENST00000490609 FPGSQ05932 587 aa18.5■□□□□ 0.55
COL2A1-207ENST00000490609 MUM1L1Q5H9M0 696 aa18.5■□□□□ 0.55
COL2A1-207ENST00000490609 RASIP1Q5U651 963 aa18.5■□□□□ 0.55
COL2A1-207ENST00000490609 NUP133Q8WUM0 1156 aa18.5■□□□□ 0.55
COL2A1-207ENST00000490609 STAG1Q8WVM7 1258 aa18.5■□□□□ 0.55
COL2A1-207ENST00000490609 PURBQ96QR8 312 aaKnown RBP18.5■□□□□ 0.55
COL2A1-207ENST00000490609 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.5■□□□□ 0.55
COL2A1-207ENST00000490609 GNEQ9Y223 722 aaKnown RBP18.5■□□□□ 0.55
COL2A1-207ENST00000490609 GRIN2DO15399 1336 aa18.49■□□□□ 0.55
COL2A1-207ENST00000490609 PLA2G6O60733 806 aa18.49■□□□□ 0.55
COL2A1-207ENST00000490609 FGRP09769 529 aa18.49■□□□□ 0.55
COL2A1-207ENST00000490609 C6orf222P0C671 652 aaPredicted RBP18.49■□□□□ 0.55
COL2A1-207ENST00000490609 PDE4BQ07343 736 aa18.49■□□□□ 0.55
COL2A1-207ENST00000490609 KCTD1Q719H9 257 aa18.49■□□□□ 0.55
COL2A1-207ENST00000490609 SLC43A3Q8NBI5 491 aa18.49■□□□□ 0.55
COL2A1-207ENST00000490609 RNPC3Q96LT9 517 aaKnown RBP18.49■□□□□ 0.55
COL2A1-207ENST00000490609 FSD1Q9BTV5 496 aa18.49■□□□□ 0.55
COL2A1-207ENST00000490609 ZNF287Q9HBT7 754 aa18.49■□□□□ 0.55
COL2A1-207ENST00000490609 FBXO40Q9UH90 709 aa18.49■□□□□ 0.55
COL2A1-207ENST00000490609 DCDC2CA8MYV0 355 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 ARVCFO00192 962 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 CD4P01730 458 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 MX1P20591 662 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 STAT2P52630 851 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 BEX3Q00994 111 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 GRIN2CQ14957 1233 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 TMEM240Q5SV17 173 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 RCSD1Q6JBY9 416 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 MFSD5Q6N075 450 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 TAPT1Q6NXT6 567 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 FAM126BQ8IXS8 530 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 VWCEQ96DN2 955 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 NAPBQ9H115 298 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 ACAD9Q9H845 621 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 PDGFCQ9NRA1 345 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 RNF146Q9NTX7 359 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 ANAPC4Q9UJX5 808 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 PRR12Q9ULL5 1215 aa18.48■□□□□ 0.55
COL2A1-207ENST00000490609 BDP1A6H8Y1 2624 aa18.47■□□□□ 0.55
COL2A1-207ENST00000490609 NCOR1O75376 2440 aa18.47■□□□□ 0.55
COL2A1-207ENST00000490609 FDX1P10109 184 aa18.47■□□□□ 0.55
COL2A1-207ENST00000490609 GNASQ5JWF2 1037 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms