RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 ARID5BQ14865 1188 aa10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 NPY5RQ15761 445 aa10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 QSER1Q2KHR3 1735 aa10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 SPRYD7Q5W111 196 aa10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 ZNF787Q6DD87 383 aa10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 TEX11Q8IYF3 940 aa10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 ZNF444Q8N0Y2 327 aaPredicted RBP10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 CCDC112Q8NEF3 446 aa10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 SNED1Q8TER0 1413 aa10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 TBC1D22AQ8WUA7 517 aa10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 DHX58Q96C10 678 aa10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 LZTS2Q9BRK4 669 aa10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 RTFDC1Q9BY42 306 aaPredicted RBP10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 MKRN1Q9UHC7 482 aaKnown RBP10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PAXBP1Q9Y5B6 917 aa10.88□□□□□ -0.67
RAB3GAP1-205ENST00000489858 FOXN1O15353 648 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 BBOX1O75936 387 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 SLC10A3P09131 477 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 SLFN14P0C7P3 912 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 ERCC5P28715 1186 aaPredicted RBP10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 HOXA10P31260 410 aaPredicted RBP10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 SARSP49591 514 aaKnown RBP10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 UBASH3AP57075 661 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 DIXDC1Q155Q3 683 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 ZNF174Q15697 407 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 CFAP100Q494V2 611 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 EARS2Q5JPH6 523 aaKnown RBP10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 GALNT17Q6IS24 598 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 ZNF598Q86UK7 904 aaKnown RBP10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 BLIDQ8IZY5 108 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PDILTQ8N807 584 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 ENOX1Q8TC92 643 aaKnown RBP10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 SYMPKQ92797 1274 aaKnown RBP10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 CRAMP1Q96RY5 1269 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 CD209Q9NNX6 404 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 LRRC4BQ9NT99 713 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PODXL2Q9NZ53 605 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PCDHA4Q9UN74 947 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 MYH1P12882 1939 aa10.87□□□□□ -0.67
RAB3GAP1-205ENST00000489858 SYNRGQ9UMZ2 1314 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 GPR75-ASB3A0A0A6YYF3 556 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 S1PR4O95977 384 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 ATP1A3P13637 1013 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 TXLNAP40222 546 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 RBM10P98175 930 aaKnown RBP10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PTPN14Q15678 1187 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 SLC4A8Q2Y0W8 1093 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 CEP135Q66GS9 1140 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 ARMCX5Q6P1M9 558 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PIK3AP1Q6ZUJ8 805 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 C16orf86Q6ZW13 317 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 SH3RF1Q7Z6J0 888 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 VSTM4Q8IW00 320 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 MAPKAPK5Q8IW41 473 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 CCAR2Q8N163 923 aaKnown RBP10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 DAGLBQ8NCG7 672 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 TGFBRAP1Q8WUH2 860 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 DYNLL2Q96FJ2 89 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 GPR101Q96P66 508 aaPredicted RBP10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 HSD3B7Q9H2F3 369 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PDCL3Q9H2J4 239 aa10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 SAP30BPQ9UHR5 308 aaKnown RBP10.86□□□□□ -0.67
RAB3GAP1-205ENST00000489858 GAKO14976 1311 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 FAM205AQ6ZU69 1335 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 CCDC194A0A1B0GVG4 234 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 VWA3AA6NCI4 1184 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 ADH1BP00325 375 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 OATP04181 439 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 TOP1P11387 765 aaKnown RBP10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 RASA1P20936 1047 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PRR20EP86478 221 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PRR20CP86479 221 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PRR20DP86480 221 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PRR20BP86481 221 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PRR20AP86496 221 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 SYCP1Q15431 976 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 GRIK5Q16478 980 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 ARL6IP4Q66PJ3 421 aaKnown RBP10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 USP49Q70CQ1 688 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 FOXP4Q8IVH2 680 aaPredicted RBP10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 GRAMD1CQ8IYS0 662 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 IQUBQ8NA54 791 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 SPATA20Q8TB22 786 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PXYLP1Q8TE99 480 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 CCDC12Q8WUD4 166 aaPredicted RBP10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PAGE5Q96GU1 130 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 SPZ1Q9BXG8 430 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 IL17RBQ9NRM6 502 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 FANCLQ9NW38 375 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 NFE2L3Q9Y4A8 694 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 BRWD3Q6RI45 1802 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 ANKRD31Q8N7Z5 1873 aa10.85□□□□□ -0.67
RAB3GAP1-205ENST00000489858 FLT1P17948 1338 aa10.84□□□□□ -0.67
RAB3GAP1-205ENST00000489858 NRXN2Q9P2S2 1712 aa10.84□□□□□ -0.67
RAB3GAP1-205ENST00000489858 A0A087X0B3 334 aa10.84□□□□□ -0.67
RAB3GAP1-205ENST00000489858 USP17L3A6NCW0 530 aa10.84□□□□□ -0.67
RAB3GAP1-205ENST00000489858 USP17L4A6NCW7 530 aa10.84□□□□□ -0.67
RAB3GAP1-205ENST00000489858 PPEF1O14829 653 aaPredicted RBP10.84□□□□□ -0.67
RAB3GAP1-205ENST00000489858 TUBB4AP04350 444 aa10.84□□□□□ -0.67
RAB3GAP1-205ENST00000489858 ZNF18P17022 549 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms