RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 GJA9P57773 515 aa17.91■□□□□ 0.46
FAM3D-204ENST00000489857 ZNF444Q8N0Y2 327 aaPredicted RBP17.91■□□□□ 0.46
FAM3D-204ENST00000489857 PCSK9Q8NBP7 692 aaKnown RBP17.91■□□□□ 0.46
FAM3D-204ENST00000489857 GMCL1P1Q8NEA9 526 aa17.91■□□□□ 0.46
FAM3D-204ENST00000489857 CHST13Q8NET6 341 aa17.91■□□□□ 0.46
FAM3D-204ENST00000489857 FBXO40Q9UH90 709 aa17.91■□□□□ 0.46
FAM3D-204ENST00000489857 SYNPO2Q9UMS6 1093 aa17.91■□□□□ 0.46
FAM3D-204ENST00000489857 SPTBN5Q9NRC6 3674 aaKnown RBP17.91■□□□□ 0.46
FAM3D-204ENST00000489857 TTC28Q96AY4 2481 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 TTLL1O95922 423 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 GNAT2P19087 354 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 OAZ1P54368 228 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 CNTN2Q02246 1040 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 TMEM240Q5SV17 173 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 SLFN13Q68D06 897 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 CCDC144CPQ8IYA2 1237 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 IFNL3Q8IZI9 196 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 USP38Q8NB14 1042 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 SPC25Q9HBM1 224 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 HOMER2Q9NSB8 354 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 MROH7Q68CQ1 1323 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 PLIN4Q96Q06 1357 aa17.9■□□□□ 0.46
FAM3D-204ENST00000489857 A0A0U1RQG5 324 aaPredicted RBP17.89■□□□□ 0.45
FAM3D-204ENST00000489857 ARVCFO00192 962 aa17.89■□□□□ 0.45
FAM3D-204ENST00000489857 APPP05067 770 aa17.89■□□□□ 0.45
FAM3D-204ENST00000489857 ZFYP08048 801 aaPredicted RBP17.89■□□□□ 0.45
FAM3D-204ENST00000489857 BMP3P12645 472 aa17.89■□□□□ 0.45
FAM3D-204ENST00000489857 CSF2RAP15509 400 aa17.89■□□□□ 0.45
FAM3D-204ENST00000489857 PPIGQ13427 754 aaKnown RBP eCLIP17.89■□□□□ 0.45
FAM3D-204ENST00000489857 GNASQ5JWF2 1037 aa17.89■□□□□ 0.45
FAM3D-204ENST00000489857 RASIP1Q5U651 963 aa17.89■□□□□ 0.45
FAM3D-204ENST00000489857 DIEXFQ68CQ4 756 aaKnown RBP17.89■□□□□ 0.45
FAM3D-204ENST00000489857 FAM126BQ8IXS8 530 aa17.89■□□□□ 0.45
FAM3D-204ENST00000489857 NEDD1Q8NHV4 660 aa17.89■□□□□ 0.45
FAM3D-204ENST00000489857 VTI1AQ96AJ9 217 aa17.89■□□□□ 0.45
FAM3D-204ENST00000489857 TIFAQ96CG3 184 aa17.89■□□□□ 0.45
FAM3D-204ENST00000489857 ZNF576Q9H609 170 aa17.89■□□□□ 0.45
FAM3D-204ENST00000489857 DCTPP1Q9H773 170 aa17.89■□□□□ 0.45
FAM3D-204ENST00000489857 ZNF287Q9HBT7 754 aa17.89■□□□□ 0.45
FAM3D-204ENST00000489857 PRUNE2Q8WUY3 3088 aa17.88■□□□□ 0.45
FAM3D-204ENST00000489857 MYH4Q9Y623 1939 aa17.88■□□□□ 0.45
FAM3D-204ENST00000489857 GRXCR1A8MXD5 290 aa17.88■□□□□ 0.45
FAM3D-204ENST00000489857 TMEM232C9JQI7 657 aa17.88■□□□□ 0.45
FAM3D-204ENST00000489857 PBX2P40425 430 aa17.88■□□□□ 0.45
FAM3D-204ENST00000489857 NKX3-2P78367 333 aa17.88■□□□□ 0.45
FAM3D-204ENST00000489857 FAM133AQ8N9E0 248 aa17.88■□□□□ 0.45
FAM3D-204ENST00000489857 GPATCH3Q96I76 525 aa17.88■□□□□ 0.45
FAM3D-204ENST00000489857 SEC62Q99442 399 aaKnown RBP17.88■□□□□ 0.45
FAM3D-204ENST00000489857 PPP1R12CQ9BZL4 782 aa17.88■□□□□ 0.45
FAM3D-204ENST00000489857 ASTN1O14525 1302 aa17.88■□□□□ 0.45
FAM3D-204ENST00000489857 ZNF536O15090 1300 aa17.88■□□□□ 0.45
FAM3D-204ENST00000489857 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.87■□□□□ 0.45
FAM3D-204ENST00000489857 SOWAHBA6NEL2 793 aa17.87■□□□□ 0.45
FAM3D-204ENST00000489857 PATL2C9JE40 543 aaKnown RBP17.87■□□□□ 0.45
FAM3D-204ENST00000489857 TSPY3P0CV98 308 aa17.87■□□□□ 0.45
FAM3D-204ENST00000489857 TSPY8P0CW00 308 aa17.87■□□□□ 0.45
FAM3D-204ENST00000489857 ACRP10323 421 aa17.87■□□□□ 0.45
FAM3D-204ENST00000489857 BEX3Q00994 111 aa17.87■□□□□ 0.45
FAM3D-204ENST00000489857 AGBL1Q96MI9 1066 aa17.87■□□□□ 0.45
FAM3D-204ENST00000489857 PBX4Q9BYU1 374 aa17.87■□□□□ 0.45
FAM3D-204ENST00000489857 ACAD9Q9H845 621 aa17.87■□□□□ 0.45
FAM3D-204ENST00000489857 A1CFQ9NQ94 594 aaKnown RBP17.87■□□□□ 0.45
FAM3D-204ENST00000489857 MCM3APO60318 1980 aa17.87■□□□□ 0.45
FAM3D-204ENST00000489857 CD4P01730 458 aa17.86■□□□□ 0.45
FAM3D-204ENST00000489857 FDX1P10109 184 aa17.86■□□□□ 0.45
FAM3D-204ENST00000489857 PTGS1P23219 599 aa17.86■□□□□ 0.45
FAM3D-204ENST00000489857 TFAP4Q01664 338 aa17.86■□□□□ 0.45
FAM3D-204ENST00000489857 TNFAIP2Q03169 654 aa17.86■□□□□ 0.45
FAM3D-204ENST00000489857 ZNF365Q70YC5 407 aa17.86■□□□□ 0.45
FAM3D-204ENST00000489857 TMEM199Q8N511 208 aa17.86■□□□□ 0.45
FAM3D-204ENST00000489857 CHMP4CQ96CF2 233 aa17.86■□□□□ 0.45
FAM3D-204ENST00000489857 GMCL1Q96IK5 515 aa17.86■□□□□ 0.45
FAM3D-204ENST00000489857 RNF146Q9NTX7 359 aa17.86■□□□□ 0.45
FAM3D-204ENST00000489857 DDX49Q9Y6V7 483 aaKnown RBP17.86■□□□□ 0.45
FAM3D-204ENST00000489857 TLR3O15455 904 aaKnown RBP17.85■□□□□ 0.45
FAM3D-204ENST00000489857 CYP2C18P33260 490 aa17.85■□□□□ 0.45
FAM3D-204ENST00000489857 STAT2P52630 851 aa17.85■□□□□ 0.45
FAM3D-204ENST00000489857 PDE4BQ07343 736 aa17.85■□□□□ 0.45
FAM3D-204ENST00000489857 PSRC1Q6PGN9 363 aaPredicted RBP17.85■□□□□ 0.45
FAM3D-204ENST00000489857 CCDC174Q6PII3 467 aa17.85■□□□□ 0.45
FAM3D-204ENST00000489857 CXCL17Q6UXB2 119 aa17.85■□□□□ 0.45
FAM3D-204ENST00000489857 SLC43A3Q8NBI5 491 aa17.85■□□□□ 0.45
FAM3D-204ENST00000489857 NACAP1Q9BZK3 213 aa17.85■□□□□ 0.45
FAM3D-204ENST00000489857 PRDM6Q9NQX0 595 aa17.85■□□□□ 0.45
FAM3D-204ENST00000489857 ISY1Q9ULR0 285 aaKnown RBP17.85■□□□□ 0.45
FAM3D-204ENST00000489857 GNEQ9Y223 722 aaKnown RBP17.85■□□□□ 0.45
FAM3D-204ENST00000489857 MCCP23508 829 aa17.84■□□□□ 0.45
FAM3D-204ENST00000489857 SLC1A4P43007 532 aa17.84■□□□□ 0.45
FAM3D-204ENST00000489857 PPARAQ07869 468 aa17.84■□□□□ 0.45
FAM3D-204ENST00000489857 CCDC129Q6ZRS4 1044 aa17.84■□□□□ 0.45
FAM3D-204ENST00000489857 NOL8Q76FK4 1167 aaKnown RBP17.84■□□□□ 0.45
FAM3D-204ENST00000489857 FAM160B2Q86V87 743 aa17.84■□□□□ 0.45
FAM3D-204ENST00000489857 CHURC1Q8WUH1 139 aa17.84■□□□□ 0.45
FAM3D-204ENST00000489857 STAG1Q8WVM7 1258 aa17.84■□□□□ 0.45
FAM3D-204ENST00000489857 SYMPKQ92797 1274 aaKnown RBP17.84■□□□□ 0.45
FAM3D-204ENST00000489857 NAPBQ9H115 298 aa17.84■□□□□ 0.45
FAM3D-204ENST00000489857 GRIN2DO15399 1336 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 UMODL1Q5DID0 1318 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 FOXP2O15409 715 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 SMPD1P17405 629 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms