RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 CRBNQ96SW2 442 aa12.15□□□□□ -0.46
AC055748.1-201ENST00000489836 OXCT2Q9BYC2 517 aaPredicted RBP12.15□□□□□ -0.46
AC055748.1-201ENST00000489836 USP40Q9NVE5 1235 aa12.15□□□□□ -0.46
AC055748.1-201ENST00000489836 TMOD2Q9NZR1 351 aa12.15□□□□□ -0.46
AC055748.1-201ENST00000489836 ANGEL1Q9UNK9 670 aaKnown RBP12.15□□□□□ -0.46
AC055748.1-201ENST00000489836 FZD1Q9UP38 647 aa12.15□□□□□ -0.46
AC055748.1-201ENST00000489836 RFX7Q2KHR2 1363 aa12.15□□□□□ -0.46
AC055748.1-201ENST00000489836 AKAP11Q9UKA4 1901 aa12.14□□□□□ -0.47
AC055748.1-201ENST00000489836 M0R2N6 131 aa12.14□□□□□ -0.47
AC055748.1-201ENST00000489836 KHNYNO15037 678 aaKnown RBP12.14□□□□□ -0.47
AC055748.1-201ENST00000489836 MAP4K4O95819 1239 aaPredicted RBP12.14□□□□□ -0.47
AC055748.1-201ENST00000489836 LDHCP07864 332 aa12.14□□□□□ -0.47
AC055748.1-201ENST00000489836 MARSP56192 900 aaKnown RBP12.14□□□□□ -0.47
AC055748.1-201ENST00000489836 GSTO1P78417 241 aa12.14□□□□□ -0.47
AC055748.1-201ENST00000489836 KIF23Q02241 960 aaPredicted RBP12.14□□□□□ -0.47
AC055748.1-201ENST00000489836 NFIAQ12857 509 aa12.14□□□□□ -0.47
AC055748.1-201ENST00000489836 GRM1Q13255 1194 aa12.14□□□□□ -0.47
AC055748.1-201ENST00000489836 PTK7Q13308 1070 aa12.14□□□□□ -0.47
AC055748.1-201ENST00000489836 PRKG1Q13976 671 aa12.14□□□□□ -0.47
AC055748.1-201ENST00000489836 C1orf229Q6ZS94 237 aaPredicted RBP12.14□□□□□ -0.47
AC055748.1-201ENST00000489836 USP17L15C9J2P7 530 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 USP17L10C9JJH3 530 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 USP17L13C9JLJ4 530 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 USP17L12C9JPN9 530 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 USP17L11C9JVI0 530 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 USP17L21D6R901 530 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 USP17L18D6R9N7 530 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 USP17L22D6RA61 530 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 USP17L17D6RBQ6 530 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 USP17L19D6RCP7 530 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 USP17L20D6RJB6 530 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 ENTPD3O75355 529 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 WDHD1O75717 1129 aaPredicted RBP12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 MAPTP10636 758 aaKnown RBP12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 BTDP43251 543 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 SEC13P55735 322 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 USP17L24Q0WX57 530 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 DPYDQ12882 1025 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 CSRNP1Q96S65 589 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 LRRCC1Q9C099 1032 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 VRTNQ9H8Y1 702 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 PIH1D3Q9NQM4 214 aaKnown RBP12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 RAI14Q9P0K7 980 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 LRP2BPQ9P2M1 347 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 HCN4Q9Y3Q4 1203 aa12.13□□□□□ -0.47
AC055748.1-201ENST00000489836 IFIT2P09913 472 aaKnown RBP12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 CD33P20138 364 aa12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 IREB2P48200 963 aaKnown RBP12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 PSMA6P60900 246 aaKnown RBP12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 TNP2Q05952 138 aa12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 KCNMA1Q12791 1236 aa12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 AAMPQ13685 434 aa12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 TMED8Q6PL24 325 aaPredicted RBP12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 LRRC69Q6ZNQ3 347 aa12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 ZFPM1Q8IX07 1006 aa12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 ANKRD13AQ8IZ07 590 aa12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 ANTXR1Q9H6X2 564 aa12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 DDX4Q9NQI0 724 aaKnown RBP12.12□□□□□ -0.47
AC055748.1-201ENST00000489836 ATRNL1Q5VV63 1379 aa12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 HSPA8P11142 646 aaKnown RBP12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 ATP5JP18859 108 aa12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 RFX1P22670 979 aa12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 TM4SF4P48230 202 aa12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 CTCFP49711 727 aaPredicted RBP12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 RGS3P49796 1198 aa12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 TCP10Q12799 353 aa12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 NAA16Q6N069 864 aaPredicted RBP12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 ADGRA1Q86SQ6 560 aa12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 NEDD1Q8NHV4 660 aa12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 HOOK2Q96ED9 719 aa12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 CLMNQ96JQ2 1002 aa12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 PRDM10Q9NQV6 1147 aa12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 ENAMQ9NRM1 1142 aa12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 ZNF112Q9UJU3 913 aa12.11□□□□□ -0.47
AC055748.1-201ENST00000489836 MYH2Q9UKX2 1941 aa12.1□□□□□ -0.47
AC055748.1-201ENST00000489836 OIP5O43482 229 aa12.1□□□□□ -0.47
AC055748.1-201ENST00000489836 CA12O43570 354 aa12.1□□□□□ -0.47
AC055748.1-201ENST00000489836 SMARCA5O60264 1052 aaPredicted RBP12.1□□□□□ -0.47
AC055748.1-201ENST00000489836 ZBTB48P10074 688 aaPredicted RBP12.1□□□□□ -0.47
AC055748.1-201ENST00000489836 WNK4Q96J92 1243 aa12.1□□□□□ -0.47
AC055748.1-201ENST00000489836 DDTLA6NHG4 134 aaPredicted RBP12.09□□□□□ -0.47
AC055748.1-201ENST00000489836 SHISA8B8ZZ34 492 aa12.09□□□□□ -0.47
AC055748.1-201ENST00000489836 IRS1P35568 1242 aa12.09□□□□□ -0.47
AC055748.1-201ENST00000489836 HDAC1Q13547 482 aaPredicted RBP12.09□□□□□ -0.47
AC055748.1-201ENST00000489836 TTF1Q15361 905 aaPredicted RBP12.09□□□□□ -0.47
AC055748.1-201ENST00000489836 DCAF15Q66K64 600 aa12.09□□□□□ -0.47
AC055748.1-201ENST00000489836 ANKMY2Q8IV38 441 aa12.09□□□□□ -0.47
AC055748.1-201ENST00000489836 SCG3Q8WXD2 468 aaKnown RBP12.09□□□□□ -0.47
AC055748.1-201ENST00000489836 HINFPQ9BQA5 517 aa12.09□□□□□ -0.47
AC055748.1-201ENST00000489836 PHACTR1Q9C0D0 580 aa12.09□□□□□ -0.47
AC055748.1-201ENST00000489836 SAGE1Q9NXZ1 904 aa12.09□□□□□ -0.47
AC055748.1-201ENST00000489836 SUPT16HQ9Y5B9 1047 aaKnown RBP12.09□□□□□ -0.47
AC055748.1-201ENST00000489836 COL2A1P02458 1487 aaPredicted RBP12.08□□□□□ -0.47
AC055748.1-201ENST00000489836 FAM196BA6NMK8 535 aa12.08□□□□□ -0.48
AC055748.1-201ENST00000489836 IDH1O75874 414 aaKnown RBP12.08□□□□□ -0.48
AC055748.1-201ENST00000489836 BAG3O95817 575 aa12.08□□□□□ -0.48
AC055748.1-201ENST00000489836 CYP7A1P22680 504 aa12.08□□□□□ -0.48
AC055748.1-201ENST00000489836 LBX1P52954 281 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms