RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	ZNF543	Q08ER8	600 aa		12.99	□□□□□ -0.33
GGA1-222	ENST00000489772	GPATCH4	Q5T3I0	446 aa	Known RBP	12.99	□□□□□ -0.33
GGA1-222	ENST00000489772	IFIT1B	Q5T764	474 aa	Known RBP	12.99	□□□□□ -0.33
GGA1-222	ENST00000489772	SYDE2	Q5VT97	1194 aa		12.99	□□□□□ -0.33
GGA1-222	ENST00000489772	TTBK2	Q6IQ55	1244 aa		12.99	□□□□□ -0.33
GGA1-222	ENST00000489772	CCDC174	Q6PII3	467 aa		12.99	□□□□□ -0.33
GGA1-222	ENST00000489772	ANKRD35	Q8N283	1001 aa		12.99	□□□□□ -0.33
GGA1-222	ENST00000489772	MAML3	Q96JK9	1138 aa		12.99	□□□□□ -0.33
GGA1-222	ENST00000489772	AGBL1	Q96MI9	1066 aa		12.99	□□□□□ -0.33
GGA1-222	ENST00000489772	CRISPLD2	Q9H0B8	497 aa		12.99	□□□□□ -0.33
GGA1-222	ENST00000489772	HOMER2	Q9NSB8	354 aa		12.99	□□□□□ -0.33
GGA1-222	ENST00000489772	DIS3	Q9Y2L1	958 aa	Known RBP	12.99	□□□□□ -0.33
GGA1-222	ENST00000489772	ZNF536	O15090	1300 aa		12.98	□□□□□ -0.33
GGA1-222	ENST00000489772	ERICH2	A1L162	156 aa		12.98	□□□□□ -0.33
GGA1-222	ENST00000489772	ICAM1	P05362	532 aa		12.98	□□□□□ -0.33
GGA1-222	ENST00000489772	CCND3	P30281	292 aa	Predicted RBP	12.98	□□□□□ -0.33
GGA1-222	ENST00000489772	SNAP25	P60880	206 aa		12.98	□□□□□ -0.33
GGA1-222	ENST00000489772	SART3	Q15020	963 aa	Known RBP	12.98	□□□□□ -0.33
GGA1-222	ENST00000489772	ZNF792	Q3KQV3	632 aa		12.98	□□□□□ -0.33
GGA1-222	ENST00000489772	TKFC	Q3LXA3	575 aa		12.98	□□□□□ -0.33
GGA1-222	ENST00000489772	CYB5R4	Q7L1T6	521 aa		12.98	□□□□□ -0.33
GGA1-222	ENST00000489772	RANBP17	Q9H2T7	1088 aa	Known RBP	12.98	□□□□□ -0.33
GGA1-222	ENST00000489772	ACAD9	Q9H845	621 aa		12.98	□□□□□ -0.33
GGA1-222	ENST00000489772	IFIT3	O14879	490 aa	Known RBP	12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	MSC	O60682	206 aa		12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	FARP2	O94887	1054 aa	Predicted RBP	12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	IGHA2	P01877	340 aa		12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	ATXN8OS	P0DMR3	200 aa		12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	ALAS1	P13196	640 aa		12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	CNGA1	P29973	690 aa		12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	ANKLE1	Q8NAG6	615 aa		12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	TRERF1	Q96PN7	1200 aa		12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	RNF146	Q9NTX7	359 aa		12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	PNMA2	Q9UL42	364 aa		12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	CCPG1	Q9ULG6	757 aa		12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	TAF6L	Q9Y6J9	622 aa		12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	MKI67	P46013	3256 aa	Known RBP	12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	PLXNB2	O15031	1838 aa		12.97	□□□□□ -0.33
GGA1-222	ENST00000489772	PARP1	P09874	1014 aa	Known RBP	12.96	□□□□□ -0.33
GGA1-222	ENST00000489772	GOLGA8H	P0CJ92	632 aa		12.96	□□□□□ -0.33
GGA1-222	ENST00000489772	ASPRV1	Q53RT3	343 aa		12.96	□□□□□ -0.33
GGA1-222	ENST00000489772	RNF20	Q5VTR2	975 aa		12.96	□□□□□ -0.33
GGA1-222	ENST00000489772	STOX1	Q6ZVD7	989 aa		12.96	□□□□□ -0.33
GGA1-222	ENST00000489772	MSL3	Q8N5Y2	521 aa	Known RBP	12.96	□□□□□ -0.33
GGA1-222	ENST00000489772	TINF2	Q9BSI4	451 aa		12.96	□□□□□ -0.33
GGA1-222	ENST00000489772	DDX20	Q9UHI6	824 aa	Known RBP	12.96	□□□□□ -0.33
GGA1-222	ENST00000489772	NRBP1	Q9UHY1	535 aa		12.96	□□□□□ -0.33
GGA1-222	ENST00000489772	OGDHL	Q9ULD0	1010 aa		12.96	□□□□□ -0.33
GGA1-222	ENST00000489772	DOCK3	Q8IZD9	2030 aa		12.96	□□□□□ -0.33
GGA1-222	ENST00000489772	MYH4	Q9Y623	1939 aa		12.96	□□□□□ -0.33
GGA1-222	ENST00000489772	TNRC18	O15417	2968 aa	Predicted RBP	12.96	□□□□□ -0.34
GGA1-222	ENST00000489772	RBBP6	Q7Z6E9	1792 aa	Known RBP	12.96	□□□□□ -0.34
GGA1-222	ENST00000489772	DNAJC25-GNG10	A0A024R161	153 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	SLC27A2	O14975	620 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	CYBA	P13498	195 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	WTAP	Q15007	396 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	NECTIN1	Q15223	517 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	SEC23A	Q15436	765 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	TMEM67	Q5HYA8	995 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	CREB3L3	Q68CJ9	461 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	LHX8	Q68G74	356 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	CHST3	Q7LGC8	479 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	UBE2Q1	Q7Z7E8	422 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	TRPV1	Q8NER1	839 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	HTATIP2	Q9BUP3	242 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	UBA5	Q9GZZ9	404 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	CNPY2	Q9Y2B0	182 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	LAMA4	Q16363	1823 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	ZNF236	Q9UL36	1845 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	PFAS	O15067	1338 aa		12.95	□□□□□ -0.34
GGA1-222	ENST00000489772	POTEB2	H3BUK9	544 aa		12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	MCM5	P33992	734 aa		12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	PRAMEF19	Q5SWL8	479 aa		12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	NECAB2	Q7Z6G3	386 aa		12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	A1CF	Q9NQ94	594 aa	Known RBP	12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	SYNGAP1	Q96PV0	1343 aa		12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	PARP14	Q460N5	1801 aa		12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	SEPT4	O43236	478 aa		12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	DHX16	O60231	1041 aa	Known RBP	12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	MAMDC4	Q6UXC1	1216 aa		12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	CATIP	Q7Z7H3	387 aa		12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	ADGRF4	Q8IZF3	695 aa		12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	DPF3	Q92784	378 aa		12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	PAWR	Q96IZ0	340 aa	Known RBP	12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	MTA3	Q9BTC8	594 aa		12.94	□□□□□ -0.34
GGA1-222	ENST00000489772	WDR19	Q8NEZ3	1342 aa		12.93	□□□□□ -0.34
GGA1-222	ENST00000489772	PRC1	O43663	620 aa		12.93	□□□□□ -0.34
GGA1-222	ENST00000489772	ANTXR2	P58335	489 aa		12.93	□□□□□ -0.34
GGA1-222	ENST00000489772	CDC37	Q16543	378 aa	Predicted RBP	12.93	□□□□□ -0.34
GGA1-222	ENST00000489772	MUM1L1	Q5H9M0	696 aa		12.93	□□□□□ -0.34
GGA1-222	ENST00000489772	PRPF38B	Q5VTL8	546 aa	Known RBP	12.93	□□□□□ -0.34
GGA1-222	ENST00000489772	NSMF	Q6X4W1	530 aa		12.93	□□□□□ -0.34
GGA1-222	ENST00000489772	FAM133A	Q8N9E0	248 aa		12.93	□□□□□ -0.34
GGA1-222	ENST00000489772	IGDCC4	Q8TDY8	1250 aa		12.93	□□□□□ -0.34
GGA1-222	ENST00000489772	CPVL	Q9H3G5	476 aa		12.93	□□□□□ -0.34
GGA1-222	ENST00000489772	C11orf49	Q9H6J7	331 aa		12.93	□□□□□ -0.34
GGA1-222	ENST00000489772	CYP39A1	Q9NYL5	469 aa		12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms